Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2m13
         (787 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   2.7  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    24   6.1  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   8.1  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   8.1  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   8.1  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
 Frame = +2

Query: 449 PSGGKTPRWNKVIHCLLP--PGVNTIYLEIFDECSFTMDELIAWTHITIPQAVLNGETHE 622
           P   +  R   ++  L P  P  N   +   +E     D+   WT +TIP+  L   T  
Sbjct: 434 PPETERARLESIVTELFPQHPPFNWPSISSEEEQEQPADQQTPWTQVTIPELRLIAST-- 491

Query: 623 DWYPLNGKQGDGLEGMINLVMSYSV 697
               +  K+  GL+G+ N  +  ++
Sbjct: 492 ----MPNKKAPGLDGIPNAAVKAAI 512


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +2

Query: 299 AAVPQSGPPMTARLSVTIAQAKLVKNY 379
           AAV QS  P T  L VT  + KL K Y
Sbjct: 133 AAVNQSVCPQTTLLPVTPEKPKLFKPY 159


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -3

Query: 506 RVVGDSE*PCSISESSRRSDQCESRIYNVQHAHEHTG 396
           ++VGD    C+++E ++R  +  + +Y   + H   G
Sbjct: 553 KMVGDYHFTCNVNEFAQRYAEEGNNVYMYLYTHRSKG 589


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -3

Query: 506 RVVGDSE*PCSISESSRRSDQCESRIYNVQHAHEHTG 396
           ++VGD    C+++E ++R  +  + +Y   + H   G
Sbjct: 553 KMVGDYHFTCNVNEFAQRYAEEGNNVYMYLYTHRSKG 589


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -3

Query: 506 RVVGDSE*PCSISESSRRSDQCESRIYNVQHAHEHTG 396
           ++VGD    C+++E ++R  +  + +Y   + H   G
Sbjct: 439 KMVGDYHFTCNVNEFAQRYAEEGNNVYMYLYTHRSKG 475


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 815,374
Number of Sequences: 2352
Number of extensions: 16582
Number of successful extensions: 58
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)