Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2m13
         (787 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061595-1|AAL29143.1|  834|Drosophila melanogaster SD04682p pro...    38   0.016
AJ278468-1|CAC42101.1| 1007|Drosophila melanogaster putative ubi...    38   0.016
AE014296-2925|AAN11694.1|  834|Drosophila melanogaster CG7555-PC...    38   0.016
AE014296-2924|AAF49328.2| 1007|Drosophila melanogaster CG7555-PA...    38   0.016
AE014296-2927|AAS64973.1|  793|Drosophila melanogaster CG7555-PD...    34   0.25 
AE014296-2926|AAN11695.1|  956|Drosophila melanogaster CG7555-PB...    34   0.25 
BT023955-1|ABB36459.1|  808|Drosophila melanogaster AT31092p pro...    33   0.44 
U73846-1|AAB61993.1|  808|Drosophila melanogaster testis-specifi...    31   2.4  
AE014134-2181|AAN10810.1|  810|Drosophila melanogaster CG31762-P...    31   2.4  
AY095529-1|AAM12260.1|  935|Drosophila melanogaster RE23942p pro...    29   7.2  
AY070503-1|AAL47974.1|  292|Drosophila melanogaster GH08896p pro...    29   7.2  
AY069846-1|AAL39991.1|  760|Drosophila melanogaster SD09318p pro...    29   7.2  
AJ012609-1|CAA10073.1|  954|Drosophila melanogaster RasGap prote...    29   7.2  
AE014298-2820|AAF48937.2|  935|Drosophila melanogaster CG7884-PA...    29   7.2  
AE014298-2320|AAS65383.1|  954|Drosophila melanogaster CG9209-PD...    29   7.2  
AE014298-2319|AAN09380.1|  954|Drosophila melanogaster CG9209-PC...    29   7.2  
AE014298-2318|AAF48558.2|  954|Drosophila melanogaster CG9209-PB...    29   7.2  
AE014298-2317|AAN09381.2|  954|Drosophila melanogaster CG9209-PA...    29   7.2  
AE014296-374|AAN11501.1|  276|Drosophila melanogaster CG12024-PB...    29   7.2  
AE014296-373|AAF47582.2|  292|Drosophila melanogaster CG12024-PA...    29   7.2  
AE013599-1064|AAM68780.2| 1734|Drosophila melanogaster CG18408-P...    29   7.2  
BT003195-1|AAO24950.1| 1199|Drosophila melanogaster RE53824p pro...    29   9.5  
AY051699-1|AAK93123.1| 1125|Drosophila melanogaster LD24316p pro...    29   9.5  
AE013599-1370|AAM68703.1| 1125|Drosophila melanogaster CG8290-PB...    29   9.5  
AE013599-1369|AAF58601.2| 1199|Drosophila melanogaster CG8290-PA...    29   9.5  

>AY061595-1|AAL29143.1|  834|Drosophila melanogaster SD04682p
           protein.
          Length = 834

 Score = 37.9 bits (84), Expect = 0.016
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
 Frame = +2

Query: 299 AAVPQSGPPMTARLSVTIAQAKLVKNYGLTRMDPYVRVRVGHCIYETHTDPSGGKT---- 466
           AAV  SG     R+ V   Q+ L K       DPYVR+ +     + + D    KT    
Sbjct: 61  AAVNDSGDSCHLRIVVLTGQS-LAKKDIFGASDPYVRIDLNTINGDINIDSVLTKTKKKT 119

Query: 467 --PRWNKVIHCLLPPGVNTIYLEIFDECSFTMDELIAWTHITI 589
             P WN+     + P  + +  ++FDE   T D+ +    +T+
Sbjct: 120 LNPTWNEEFIFRVKPSEHKLVFQVFDENRLTRDDFLGMVELTL 162


>AJ278468-1|CAC42101.1| 1007|Drosophila melanogaster putative
           ubiquitin ligase protein.
          Length = 1007

 Score = 37.9 bits (84), Expect = 0.016
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
 Frame = +2

Query: 299 AAVPQSGPPMTARLSVTIAQAKLVKNYGLTRMDPYVRVRVGHCIYETHTDPSGGKT---- 466
           AAV  SG     R+ V   Q+ L K       DPYVR+ +     + + D    KT    
Sbjct: 61  AAVNDSGDSCHLRIVVLTGQS-LAKKDIFGASDPYVRIDLNTINGDINIDSVLTKTKKKT 119

Query: 467 --PRWNKVIHCLLPPGVNTIYLEIFDECSFTMDELIAWTHITI 589
             P WN+     + P  + +  ++FDE   T D+ +    +T+
Sbjct: 120 LNPTWNEEFIFRVKPSEHKLVFQVFDENRLTRDDFLGMVELTL 162


>AE014296-2925|AAN11694.1|  834|Drosophila melanogaster CG7555-PC,
           isoform C protein.
          Length = 834

 Score = 37.9 bits (84), Expect = 0.016
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
 Frame = +2

Query: 299 AAVPQSGPPMTARLSVTIAQAKLVKNYGLTRMDPYVRVRVGHCIYETHTDPSGGKT---- 466
           AAV  SG     R+ V   Q+ L K       DPYVR+ +     + + D    KT    
Sbjct: 61  AAVNDSGDSCHLRIVVLTGQS-LAKKDIFGASDPYVRIDLNTINGDINIDSVLTKTKKKT 119

Query: 467 --PRWNKVIHCLLPPGVNTIYLEIFDECSFTMDELIAWTHITI 589
             P WN+     + P  + +  ++FDE   T D+ +    +T+
Sbjct: 120 LNPTWNEEFIFRVKPSEHKLVFQVFDENRLTRDDFLGMVELTL 162


>AE014296-2924|AAF49328.2| 1007|Drosophila melanogaster CG7555-PA,
           isoform A protein.
          Length = 1007

 Score = 37.9 bits (84), Expect = 0.016
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
 Frame = +2

Query: 299 AAVPQSGPPMTARLSVTIAQAKLVKNYGLTRMDPYVRVRVGHCIYETHTDPSGGKT---- 466
           AAV  SG     R+ V   Q+ L K       DPYVR+ +     + + D    KT    
Sbjct: 61  AAVNDSGDSCHLRIVVLTGQS-LAKKDIFGASDPYVRIDLNTINGDINIDSVLTKTKKKT 119

Query: 467 --PRWNKVIHCLLPPGVNTIYLEIFDECSFTMDELIAWTHITI 589
             P WN+     + P  + +  ++FDE   T D+ +    +T+
Sbjct: 120 LNPTWNEEFIFRVKPSEHKLVFQVFDENRLTRDDFLGMVELTL 162


>AE014296-2927|AAS64973.1|  793|Drosophila melanogaster CG7555-PD,
           isoform D protein.
          Length = 793

 Score = 33.9 bits (74), Expect = 0.25
 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
 Frame = +2

Query: 314 SGPPMTARLSVTIAQAKLVKNYGLTRMDPYVRVRVGHCIYETHTDPSGGKT------PRW 475
           SG     R+ V   Q+ L K       DPYVR+ +     + + D    KT      P W
Sbjct: 28  SGDSCHLRIVVLTGQS-LAKKDIFGASDPYVRIDLNTINGDINIDSVLTKTKKKTLNPTW 86

Query: 476 NKVIHCLLPPGVNTIYLEIFDECSFTMDELIAWTHITI 589
           N+     + P  + +  ++FDE   T D+ +    +T+
Sbjct: 87  NEEFIFRVKPSEHKLVFQVFDENRLTRDDFLGMVELTL 124


>AE014296-2926|AAN11695.1|  956|Drosophila melanogaster CG7555-PB,
           isoform B protein.
          Length = 956

 Score = 33.9 bits (74), Expect = 0.25
 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
 Frame = +2

Query: 314 SGPPMTARLSVTIAQAKLVKNYGLTRMDPYVRVRVGHCIYETHTDPSGGKT------PRW 475
           SG     R+ V   Q+ L K       DPYVR+ +     + + D    KT      P W
Sbjct: 28  SGDSCHLRIVVLTGQS-LAKKDIFGASDPYVRIDLNTINGDINIDSVLTKTKKKTLNPTW 86

Query: 476 NKVIHCLLPPGVNTIYLEIFDECSFTMDELIAWTHITI 589
           N+     + P  + +  ++FDE   T D+ +    +T+
Sbjct: 87  NEEFIFRVKPSEHKLVFQVFDENRLTRDDFLGMVELTL 124


>BT023955-1|ABB36459.1|  808|Drosophila melanogaster AT31092p
           protein.
          Length = 808

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -3

Query: 302 QHHIAVVVKQVQLHNQSPHRQK*HQHEENLLEEDLAVL 189
           QHH A  +KQ Q H+   H Q   Q ++NLL++   +L
Sbjct: 729 QHHAAETIKQQQQHHLQRHLQHHLQQQQNLLQQQQNLL 766


>U73846-1|AAB61993.1|  808|Drosophila melanogaster testis-specific
           RNP-type RNA bindingprotein protein.
          Length = 808

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 317 HFVVLQHHIAVVVKQVQLHNQSPHRQK*HQH 225
           H   LQ H A+  +Q QLH+  PH    H H
Sbjct: 106 HHHQLQRHTALHQQQQQLHHHQPHHNHHHHH 136


>AE014134-2181|AAN10810.1|  810|Drosophila melanogaster CG31762-PB,
           isoform B protein.
          Length = 810

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 317 HFVVLQHHIAVVVKQVQLHNQSPHRQK*HQH 225
           H   LQ H A+  +Q QLH+  PH    H H
Sbjct: 106 HHHQLQRHTALNQQQQQLHHHQPHHNHHHHH 136


>AY095529-1|AAM12260.1|  935|Drosophila melanogaster RE23942p
           protein.
          Length = 935

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 275 QVQLHNQSPHRQK*HQHEENLLEED 201
           Q QLH+Q  H    H H+ N LEE+
Sbjct: 579 QHQLHHQPNHHHNHHNHQSNDLEEE 603


>AY070503-1|AAL47974.1|  292|Drosophila melanogaster GH08896p
           protein.
          Length = 292

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
 Frame = +2

Query: 161 NDTNEERRRR---VLLGPLPAGFLR 226
           N+T  +R RR    +LGPLPAGFLR
Sbjct: 137 NNTPTKRSRRWNPPILGPLPAGFLR 161


>AY069846-1|AAL39991.1|  760|Drosophila melanogaster SD09318p
           protein.
          Length = 760

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = +2

Query: 497 LPPGVNTIYLEIFDECSFTMDELIAWTHITIPQAVLNGETHEDWYPLNGKQGDGLEGMIN 676
           +PP V ++ + +        D  +A   I +  ++ NG+  E WY L G    G  G + 
Sbjct: 361 VPPDVVSLTITLISRGKRGKDSEVAELTIDL-SSLKNGQETEGWYQLTGMTPMGEWGSLR 419

Query: 677 LVMSY 691
           L M Y
Sbjct: 420 LRMRY 424


>AJ012609-1|CAA10073.1|  954|Drosophila melanogaster RasGap protein
           protein.
          Length = 954

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = +2

Query: 497 LPPGVNTIYLEIFDECSFTMDELIAWTHITIPQAVLNGETHEDWYPLNGKQGDGLEGMIN 676
           +PP V ++ + +        D  +A   I +  ++ NG+  E WY L G    G  G + 
Sbjct: 555 VPPDVVSLTITLISRGKRGKDSEVAELTIDL-SSLKNGQETEGWYQLTGMTPMGEWGSLR 613

Query: 677 LVMSY 691
           L M Y
Sbjct: 614 LRMRY 618


>AE014298-2820|AAF48937.2|  935|Drosophila melanogaster CG7884-PA
           protein.
          Length = 935

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 275 QVQLHNQSPHRQK*HQHEENLLEED 201
           Q QLH+Q  H    H H+ N LEE+
Sbjct: 579 QHQLHHQPNHHHNHHNHQSNDLEEE 603


>AE014298-2320|AAS65383.1|  954|Drosophila melanogaster CG9209-PD,
           isoform D protein.
          Length = 954

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = +2

Query: 497 LPPGVNTIYLEIFDECSFTMDELIAWTHITIPQAVLNGETHEDWYPLNGKQGDGLEGMIN 676
           +PP V ++ + +        D  +A   I +  ++ NG+  E WY L G    G  G + 
Sbjct: 555 VPPDVVSLTITLISRGKRGKDSEVAELTIDL-SSLKNGQETEGWYQLTGMTPMGEWGSLR 613

Query: 677 LVMSY 691
           L M Y
Sbjct: 614 LRMRY 618


>AE014298-2319|AAN09380.1|  954|Drosophila melanogaster CG9209-PC,
           isoform C protein.
          Length = 954

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = +2

Query: 497 LPPGVNTIYLEIFDECSFTMDELIAWTHITIPQAVLNGETHEDWYPLNGKQGDGLEGMIN 676
           +PP V ++ + +        D  +A   I +  ++ NG+  E WY L G    G  G + 
Sbjct: 555 VPPDVVSLTITLISRGKRGKDSEVAELTIDL-SSLKNGQETEGWYQLTGMTPMGEWGSLR 613

Query: 677 LVMSY 691
           L M Y
Sbjct: 614 LRMRY 618


>AE014298-2318|AAF48558.2|  954|Drosophila melanogaster CG9209-PB,
           isoform B protein.
          Length = 954

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = +2

Query: 497 LPPGVNTIYLEIFDECSFTMDELIAWTHITIPQAVLNGETHEDWYPLNGKQGDGLEGMIN 676
           +PP V ++ + +        D  +A   I +  ++ NG+  E WY L G    G  G + 
Sbjct: 555 VPPDVVSLTITLISRGKRGKDSEVAELTIDL-SSLKNGQETEGWYQLTGMTPMGEWGSLR 613

Query: 677 LVMSY 691
           L M Y
Sbjct: 614 LRMRY 618


>AE014298-2317|AAN09381.2|  954|Drosophila melanogaster CG9209-PA,
           isoform A protein.
          Length = 954

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = +2

Query: 497 LPPGVNTIYLEIFDECSFTMDELIAWTHITIPQAVLNGETHEDWYPLNGKQGDGLEGMIN 676
           +PP V ++ + +        D  +A   I +  ++ NG+  E WY L G    G  G + 
Sbjct: 555 VPPDVVSLTITLISRGKRGKDSEVAELTIDL-SSLKNGQETEGWYQLTGMTPMGEWGSLR 613

Query: 677 LVMSY 691
           L M Y
Sbjct: 614 LRMRY 618


>AE014296-374|AAN11501.1|  276|Drosophila melanogaster CG12024-PB,
           isoform B protein.
          Length = 276

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
 Frame = +2

Query: 161 NDTNEERRRR---VLLGPLPAGFLR 226
           N+T  +R RR    +LGPLPAGFLR
Sbjct: 121 NNTPTKRSRRWNPPILGPLPAGFLR 145


>AE014296-373|AAF47582.2|  292|Drosophila melanogaster CG12024-PA,
           isoform A protein.
          Length = 292

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
 Frame = +2

Query: 161 NDTNEERRRR---VLLGPLPAGFLR 226
           N+T  +R RR    +LGPLPAGFLR
Sbjct: 137 NNTPTKRSRRWNPPILGPLPAGFLR 161


>AE013599-1064|AAM68780.2| 1734|Drosophila melanogaster CG18408-PB,
            isoform B protein.
          Length = 1734

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -3

Query: 287  VVVKQVQLHNQSPHRQK*HQHEENLLEEDLAVLY-DDVLHLYH 162
            V  K V +H ++P R   H+  +NL EE+LA+   + +  LYH
Sbjct: 1388 VTFKDVNIHFKTPIR---HEQRQNLSEEELAIRQAEHMQKLYH 1427


>BT003195-1|AAO24950.1| 1199|Drosophila melanogaster RE53824p
           protein.
          Length = 1199

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = +2

Query: 602 LNGETHEDWYPL-NGKQGDGLEGMINLVMSYSVGPAAVASFPPVLVVPSTGMGYAAMPRV 778
           LN    +D Y L NG+       +   +   S  P      PP LVVP  G G    PR 
Sbjct: 394 LNSAAQQDSYRLPNGRLIQVKRQVPQTIQPASTVPTPPT--PPALVVPQVGPGVVIRPRA 451

Query: 779 P 781
           P
Sbjct: 452 P 452


>AY051699-1|AAK93123.1| 1125|Drosophila melanogaster LD24316p
           protein.
          Length = 1125

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = +2

Query: 602 LNGETHEDWYPL-NGKQGDGLEGMINLVMSYSVGPAAVASFPPVLVVPSTGMGYAAMPRV 778
           LN    +D Y L NG+       +   +   S  P      PP LVVP  G G    PR 
Sbjct: 394 LNSAAQQDSYRLPNGRLIQVKRQVPQTIQPASTVPTPPT--PPALVVPQVGPGVVIRPRA 451

Query: 779 P 781
           P
Sbjct: 452 P 452


>AE013599-1370|AAM68703.1| 1125|Drosophila melanogaster CG8290-PB,
           isoform B protein.
          Length = 1125

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = +2

Query: 602 LNGETHEDWYPL-NGKQGDGLEGMINLVMSYSVGPAAVASFPPVLVVPSTGMGYAAMPRV 778
           LN    +D Y L NG+       +   +   S  P      PP LVVP  G G    PR 
Sbjct: 394 LNSAAQQDSYRLPNGRLIQVKRQVPQTIQPASTVPTPPT--PPALVVPQVGPGVVIRPRA 451

Query: 779 P 781
           P
Sbjct: 452 P 452


>AE013599-1369|AAF58601.2| 1199|Drosophila melanogaster CG8290-PA,
           isoform A protein.
          Length = 1199

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = +2

Query: 602 LNGETHEDWYPL-NGKQGDGLEGMINLVMSYSVGPAAVASFPPVLVVPSTGMGYAAMPRV 778
           LN    +D Y L NG+       +   +   S  P      PP LVVP  G G    PR 
Sbjct: 394 LNSAAQQDSYRLPNGRLIQVKRQVPQTIQPASTVPTPPT--PPALVVPQVGPGVVIRPRA 451

Query: 779 P 781
           P
Sbjct: 452 P 452


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,764,946
Number of Sequences: 53049
Number of extensions: 734913
Number of successful extensions: 1900
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1900
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)