Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2m13
         (787 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-1|CAB02090.1|  457|Caenorhabditis elegans Hypothetical pr...   154   8e-38
Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical pr...    32   0.53 
Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical p...    29   5.0  
Z98877-15|CAB63407.3|  572|Caenorhabditis elegans Hypothetical p...    29   5.0  
Z92817-1|CAB07296.1|  367|Caenorhabditis elegans Hypothetical pr...    28   8.7  
AF099913-2|AAC68749.1|  254|Caenorhabditis elegans Hypothetical ...    28   8.7  

>Z79754-1|CAB02090.1|  457|Caenorhabditis elegans Hypothetical
           protein F25H2.1 protein.
          Length = 457

 Score =  154 bits (373), Expect = 8e-38
 Identities = 79/180 (43%), Positives = 111/180 (61%)
 Frame = +2

Query: 155 MPNDTNEERRRRVLLGPLPAGFLRADATSDGVDSDYEXXXXXXXXXYGAAVPQSGPPMTA 334
           M  +T  ERRR+VL+G LP  FLR       V                + VP   P    
Sbjct: 1   MNTETVAERRRQVLVGELPPHFLRL-----AVPIQQTAEPEIVQPRMVSFVP---PNTRG 52

Query: 335 RLSVTIAQAKLVKNYGLTRMDPYVRVRVGHCIYETHTDPSGGKTPRWNKVIHCLLPPGVN 514
           RLSVTI +A LVKNYGL RMDPY RVRVG+  ++T+   + G+ P WN+ ++  LP  V 
Sbjct: 53  RLSVTILEANLVKNYGLVRMDPYCRVRVGNVEFDTNVAANAGRAPTWNRTLNAYLPMNVE 112

Query: 515 TIYLEIFDECSFTMDELIAWTHITIPQAVLNGETHEDWYPLNGKQGDGLEGMINLVMSYS 694
           +IY++IFDE +F  DE+IAW HI +P A+ NG+  ++++ L+G+QG+G EGMI+L  S++
Sbjct: 113 SIYIQIFDEKAFGPDEVIAWAHIMLPLAIFNGDNIDEYFQLSGQQGEGKEGMIHLHFSFA 172


>Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK666.7 protein.
          Length = 403

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 253 VHTVRSSISTKKTCWKRT*QYSTTTFFICIIRHC 152
           V  V+SS S+ KTCW+ T + S T  ++C +  C
Sbjct: 360 VVNVQSSSSSAKTCWQNT-KSSLTNMYVCEVATC 392


>Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical
           protein Y69H2.10b protein.
          Length = 975

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 298 CCSTTKWPSNDSETKCHYSSS*AC*KLWTNSYGPVCSCACWT 423
           C  TTK   N++ +KCH      C K+   +  P C  ACW+
Sbjct: 514 CFGTTKCSDNEAWSKCH-----NCEKVCFQTANPSCK-ACWS 549


>Z98877-15|CAB63407.3|  572|Caenorhabditis elegans Hypothetical
           protein Y69H2.10a protein.
          Length = 572

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 298 CCSTTKWPSNDSETKCHYSSS*AC*KLWTNSYGPVCSCACWT 423
           C  TTK   N++ +KCH      C K+   +  P C  ACW+
Sbjct: 514 CFGTTKCSDNEAWSKCH-----NCEKVCFQTANPSCK-ACWS 549


>Z92817-1|CAB07296.1|  367|Caenorhabditis elegans Hypothetical
           protein W08G11.1 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 554 MDELIAWTHITIPQAVLNGETHEDWYPLNGKQGDGLEGMI 673
           + +L+ WT   I Q    GE+   ++ + G + DGL G +
Sbjct: 158 ISKLMGWTKDEIGQLAYPGESVSMYHAMKGHRLDGLSGFV 197


>AF099913-2|AAC68749.1|  254|Caenorhabditis elegans Hypothetical
           protein C29F9.8 protein.
          Length = 254

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 476 NKVIHCLLPPGVNTIY 523
           N ++HCLL  GVNT+Y
Sbjct: 140 NAILHCLLCLGVNTLY 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,564,203
Number of Sequences: 27780
Number of extensions: 370813
Number of successful extensions: 903
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)