Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2m12
         (704 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         21   3.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         21   3.6  
AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    23   7.1  
AJ010904-1|CAA09390.1|  142|Anopheles gambiae nitric oxide synth...    23   9.4  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.4 bits (43), Expect(2) = 3.6
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 474 HHQHSQHNGPN*PDP 430
           HH H QH+    P P
Sbjct: 105 HHPHHQHHPQQQPSP 119



 Score = 21.0 bits (42), Expect(2) = 3.6
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 480 PTHHQHSQHN 451
           P HHQH  H+
Sbjct: 92  PHHHQHPHHH 101


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.4 bits (43), Expect(2) = 3.6
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 474 HHQHSQHNGPN*PDP 430
           HH H QH+    P P
Sbjct: 105 HHPHHQHHPQQQPSP 119



 Score = 21.0 bits (42), Expect(2) = 3.6
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 480 PTHHQHSQHN 451
           P HHQH  H+
Sbjct: 92  PHHHQHPHHH 101


>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +2

Query: 266 PIWSQRLLGE*TSSVCLKYAAREPG 340
           P+W + ++G    + C  Y  + PG
Sbjct: 7   PLWRRDIVGHTLCNACALYTRQNPG 31


>AJ010904-1|CAA09390.1|  142|Anopheles gambiae nitric oxide synthase
           protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -1

Query: 512 WLGSGCLSSGIQLITNIRNTMVQ---IDQIQASLTRAD 408
           WL  GC +  + L  + +  MVQ   +D++  +L+R +
Sbjct: 26  WLFFGCRTKNVDLYRDEKEEMVQKGVLDRVFLALSREE 63


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,316
Number of Sequences: 2352
Number of extensions: 15655
Number of successful extensions: 47
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)