Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2m12
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031020-1|AAH31020.1|  250|Homo sapiens interferon, gamma-induc...    37   0.081
J03909-1|AAA36105.1|  303|Homo sapiens gamma-interferon-inducibl...    36   0.11 
BC021136-1|AAH21136.1|  250|Homo sapiens interferon, gamma-induc...    36   0.11 
AF097362-1|AAF04618.1|  261|Homo sapiens gamma-interferon induci...    36   0.11 
AB049659-1|BAC98466.1|  250|Homo sapiens legumaturain protein.         36   0.11 
AF161343-1|AAF28903.1|  140|Homo sapiens HSPC080 protein.              33   0.99 
AK123477-1|BAC85622.1|  148|Homo sapiens protein ( Homo sapiens ...    31   4.0  

>BC031020-1|AAH31020.1|  250|Homo sapiens interferon,
           gamma-inducible protein 30 protein.
          Length = 250

 Score = 36.7 bits (81), Expect = 0.081
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = +3

Query: 111 IKISVGTTAGCSDTVNFISQQLKEAYDLYKEYLEIEYVPWGRTRFDN----GQFTCQFGV 278
           + +++   A C     F+ ++L   + L  E L +  VP+G  +  N     +F CQ G 
Sbjct: 62  VNVTLYYEALCGGCQAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGE 121

Query: 279 NDCWANRLHRCALNML 326
            +C  N++  C L+ L
Sbjct: 122 EECKFNKVEACVLDEL 137


>J03909-1|AAA36105.1|  303|Homo sapiens gamma-interferon-inducible
           protein precursor protein.
          Length = 303

 Score = 36.3 bits (80), Expect = 0.11
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = +3

Query: 111 IKISVGTTAGCSDTVNFISQQLKEAYDLYKEYLEIEYVPWGRTRFDN----GQFTCQFGV 278
           + +++   A C     F+ ++L   + L  E L +  VP+G  +  N     +F CQ G 
Sbjct: 73  VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTSVPYGNAQEQNVSGRWEFKCQLGE 132

Query: 279 NDCWANRLHRCALNML 326
            +C  N++  C L+ L
Sbjct: 133 EECKFNKVEACVLDEL 148


>BC021136-1|AAH21136.1|  250|Homo sapiens interferon,
           gamma-inducible protein 30 protein.
          Length = 250

 Score = 36.3 bits (80), Expect = 0.11
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = +3

Query: 111 IKISVGTTAGCSDTVNFISQQLKEAYDLYKEYLEIEYVPWGRTRFDN----GQFTCQFGV 278
           + +++   A C     F+ ++L   + L  E L +  VP+G  +  N     +F CQ G 
Sbjct: 62  VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGE 121

Query: 279 NDCWANRLHRCALNML 326
            +C  N++  C L+ L
Sbjct: 122 EECKFNKVEACVLDEL 137


>AF097362-1|AAF04618.1|  261|Homo sapiens gamma-interferon inducible
           lysosomal thiol reductase protein.
          Length = 261

 Score = 36.3 bits (80), Expect = 0.11
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = +3

Query: 111 IKISVGTTAGCSDTVNFISQQLKEAYDLYKEYLEIEYVPWGRTRFDN----GQFTCQFGV 278
           + +++   A C     F+ ++L   + L  E L +  VP+G  +  N     +F CQ G 
Sbjct: 73  VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGE 132

Query: 279 NDCWANRLHRCALNML 326
            +C  N++  C L+ L
Sbjct: 133 EECKFNKVEACVLDEL 148


>AB049659-1|BAC98466.1|  250|Homo sapiens legumaturain protein.
          Length = 250

 Score = 36.3 bits (80), Expect = 0.11
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = +3

Query: 111 IKISVGTTAGCSDTVNFISQQLKEAYDLYKEYLEIEYVPWGRTRFDN----GQFTCQFGV 278
           + +++   A C     F+ ++L   + L  E L +  VP+G  +  N     +F CQ G 
Sbjct: 62  VNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGE 121

Query: 279 NDCWANRLHRCALNML 326
            +C  N++  C L+ L
Sbjct: 122 EECKFNKVEACVLDEL 137


>AF161343-1|AAF28903.1|  140|Homo sapiens HSPC080 protein.
          Length = 140

 Score = 33.1 bits (72), Expect = 0.99
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -3

Query: 360 ACSVLGHPGSRAAYLRHTDEVYSPSSR*LQIGK*TVHCQNAFYPKVRIRFLGILCTGH 187
           A SV  HP   +A +  T+  + P+S  L + + ++ CQ    PK R+     LC  H
Sbjct: 23  ALSVPSHPAHGSALMLPTNAYHRPASALLCLSRSSLPCQLGPSPKARVAVRSSLCPQH 80


>AK123477-1|BAC85622.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41483 fis, clone BRTHA2002808, highly  similar
           to GAMMA-INTERFERON-INDUCIBLE PROTEIN IP-30 PRECURSOR.
           ).
          Length = 148

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = +3

Query: 201 EYLEIEYVPWGRTRFDN----GQFTCQFGVNDCWANRLHRCALNML 326
           E L +  VP+G  +  N     +F CQ G  +C  N++  C L+ L
Sbjct: 2   EILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDEL 47


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,605,962
Number of Sequences: 237096
Number of extensions: 2290795
Number of successful extensions: 15079
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15079
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)