Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2m09
         (203 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23DV8 Cluster: Putative uncharacterized protein; n=1; ...    33   0.92 
UniRef50_Q97AB6 Cluster: Putative uncharacterized protein TVG091...    32   2.8  
UniRef50_Q3UQ20 Cluster: 0 day neonate lung cDNA, RIKEN full-len...    31   3.7  
UniRef50_UPI00006CBF64 Cluster: hypothetical protein TTHERM_0031...    31   6.5  
UniRef50_Q1PVS9 Cluster: Similar to ATPG gene encoding subunit g...    31   6.5  
UniRef50_Q7RIR9 Cluster: Var1p, putative; n=3; Plasmodium (Vinck...    31   6.5  
UniRef50_Q7RF72 Cluster: Chloroquine resistance marker protein; ...    31   6.5  
UniRef50_A0DTD8 Cluster: Chromosome undetermined scaffold_63, wh...    31   6.5  
UniRef50_A2FTL6 Cluster: Rap/ran-GAP family protein; n=1; Tricho...    30   8.5  
UniRef50_Q8TRW3 Cluster: Putative uncharacterized protein; n=1; ...    30   8.5  
UniRef50_Q6H9I1 Cluster: Serine/threonine-protein kinase ATG1; n...    30   8.5  

>UniRef50_Q23DV8 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 3106

 Score = 33.5 bits (73), Expect = 0.92
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -1

Query: 197  FYLH*LFSKYFINTIHSITPKIITFSNMKPKLKYNFYLHVFLLTNL 60
            +YL     KYF     S     ITFSN+ P  +Y+ YL    L N+
Sbjct: 1599 YYLSSFNGKYFTGPYTSDQTPQITFSNLPPHYEYSVYLDFIFLDNM 1644


>UniRef50_Q97AB6 Cluster: Putative uncharacterized protein
           TVG0911574; n=1; Thermoplasma volcanium|Rep: Putative
           uncharacterized protein TVG0911574 - Thermoplasma
           volcanium
          Length = 376

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -1

Query: 164 INTIHSITPKIITFSNMKPKLKYNFYLHVFLLTNLYHSNIDY*VHIQNKY 15
           +N +  I  +I +  N KPKL Y+F   +F+L       +DY  ++ NK+
Sbjct: 48  LNKLEDIDYEIFSGENYKPKLIYSFITGLFMLDRRGEGTVDY--NLINKF 95


>UniRef50_Q3UQ20 Cluster: 0 day neonate lung cDNA, RIKEN full-length
           enriched library, clone:E030003M06 product:hypothetical
           protein, full insert sequence; n=2; Mus musculus|Rep: 0
           day neonate lung cDNA, RIKEN full-length enriched
           library, clone:E030003M06 product:hypothetical protein,
           full insert sequence - Mus musculus (Mouse)
          Length = 208

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 203 FFFYLH*LFSKYFINTIHSITPKIITFSNMKPKLKYNFYLHVFL 72
           FF Y+H + S Y     H  +P + TF ++   L Y F++++ L
Sbjct: 25  FFLYIHYIHSLY--TYFHVFSPLLYTFFHVFSPLLYTFFIYILL 66


>UniRef50_UPI00006CBF64 Cluster: hypothetical protein TTHERM_00310870;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00310870 - Tetrahymena thermophila SB210
          Length = 2391

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = -1

Query: 182  LFSKYFINTIHSITPKIITFSNMKPKLKYNFYL 84
            LF + +IN I+S  P  ITFSN+  +  Y+FYL
Sbjct: 2035 LFIQSYINQINS--PFNITFSNLSDRTVYDFYL 2065


>UniRef50_Q1PVS9 Cluster: Similar to ATPG gene encoding subunit
           gamma of ATP synthase; n=1; Candidatus Kuenenia
           stuttgartiensis|Rep: Similar to ATPG gene encoding
           subunit gamma of ATP synthase - Candidatus Kuenenia
           stuttgartiensis
          Length = 279

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = -1

Query: 164 INTIHSITP-KIITFSNMKPKLKYNFYLHVFLLTNLY 57
           IN +++++P +I  F+ +KPK+ +N  L  FL  +LY
Sbjct: 184 INKVNALSPTRIPPFTYLKPKIIFNKILEEFLFISLY 220


>UniRef50_Q7RIR9 Cluster: Var1p, putative; n=3; Plasmodium
           (Vinckeia)|Rep: Var1p, putative - Plasmodium yoelii
           yoelii
          Length = 464

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = -1

Query: 197 FYLH*LFSKYFINTIHSITPKIITFSNMKPKLKYNFYLHVFLLTNLYHSNID 42
           FY+   + KY++NT+  ++PK++  +N    L  N + ++  + N  H+NID
Sbjct: 227 FYIK-YYVKYYLNTLFHLSPKLV-INNYSSMLYNNKFPYISQIGN-SHNNID 275


>UniRef50_Q7RF72 Cluster: Chloroquine resistance marker protein;
           n=5; Plasmodium (Vinckeia)|Rep: Chloroquine resistance
           marker protein - Plasmodium yoelii yoelii
          Length = 950

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -1

Query: 110 PKLKYNFYLHVFLLTNLYHSNIDY*VHIQN 21
           PKL + F++++ +  N  H++IDY  +I N
Sbjct: 375 PKLPFTFFIYLIMXLNNIHTHIDYKGYINN 404


>UniRef50_A0DTD8 Cluster: Chromosome undetermined scaffold_63, whole
            genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
            undetermined scaffold_63, whole genome shotgun sequence -
            Paramecium tetraurelia
          Length = 2465

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +1

Query: 4    FQVKYLFCICT**SMFE*YKLVSKNTCR*KLYFNLGFMLENV 129
            F +K LFCIC+   +FE + L+  N  R  L+F    M+ N+
Sbjct: 2159 FWIKILFCICS--FIFEAFVLIFSNEHRISLFFAFIVMIYNI 2198


>UniRef50_A2FTL6 Cluster: Rap/ran-GAP family protein; n=1;
           Trichomonas vaginalis G3|Rep: Rap/ran-GAP family protein
           - Trichomonas vaginalis G3
          Length = 1114

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -1

Query: 173 KYFINTIHSITPKIITFSNMKPKLKYNFYLHVFLLTNLYHSN 48
           KY+     SI P II   N  P+ K + ++ +F ++  YHSN
Sbjct: 280 KYYTEKKISIYPLIIEKLNEIPEFKNSCFVQLFTISIYYHSN 321


>UniRef50_Q8TRW3 Cluster: Putative uncharacterized protein; n=1;
           Methanosarcina acetivorans|Rep: Putative uncharacterized
           protein - Methanosarcina acetivorans
          Length = 714

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -1

Query: 140 PKIITFSNMKPKLKYNFYLHVFLLTNLYHSNI 45
           P +ITF+++ PK  Y F + +  ++ LYH+++
Sbjct: 187 PILITFTDLLPKRLYPFAIFIISISILYHNSL 218


>UniRef50_Q6H9I1 Cluster: Serine/threonine-protein kinase ATG1; n=6;
           Pezizomycotina|Rep: Serine/threonine-protein kinase ATG1
           - Botrytis cinerea (Noble rot fungus) (Botryotinia
           fuckeliana)
          Length = 952

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 137 KIITFSNMKPKLKYNFYLHVFLLTNLYHSNI 45
           K +  S +  KLK N Y+ + +L +LYH +I
Sbjct: 52  KSVNLSRLNKKLKDNLYVEIEILKSLYHPHI 82


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,530,970
Number of Sequences: 1657284
Number of extensions: 2209146
Number of successful extensions: 5349
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5343
length of database: 575,637,011
effective HSP length: 47
effective length of database: 497,744,663
effective search space used: 9954893260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)