Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2m09
(203 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual 26 0.79
SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein 2|S... 25 1.0
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 25 1.0
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 24 3.2
SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase Cka1|Sch... 23 4.2
SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-phosphat... 23 5.5
SPAC4D7.08c |ade4|min13, aza1|amidophosphoribosyltransferase |Sc... 23 5.5
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 23 7.3
SPBC16A3.12c |||triglyceride lipase-cholesterol esterase |Schizo... 23 7.3
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 23 7.3
SPAC23C4.06c |||methyltransferase |Schizosaccharomyces pombe|chr... 22 9.7
SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomy... 22 9.7
>SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 25.8 bits (54), Expect = 0.79
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -1
Query: 200 FFYLH*LFSKYFINTIHSITPKI-ITFSNM--KPKLKYNFYLHVFLLTNL 60
F+Y + LF F+ IHSI P + F N K K+ F L L +L
Sbjct: 509 FYYGYALFPTIFLQLIHSIFPNTKLGFKNFLTVAKQKHGFSLLKILFISL 558
>SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 25.4 bits (53), Expect = 1.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 149 SITPKIITFSNMKPKLKYNFYLHVFLLTNLY 57
S P+I+ F +P LKYN Y + N Y
Sbjct: 201 STCPRILEFMPYEPLLKYNSYRLLSTYENSY 231
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 25.4 bits (53), Expect = 1.0
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -1
Query: 101 KYNFYLHVFLLTNLYHSNI 45
++N +HVFL+ ++YHS+I
Sbjct: 434 EWNKPVHVFLMRHVYHSSI 452
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 23.8 bits (49), Expect = 3.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 64 IYIIQTLTIRYIYRINILLE 5
+YIIQT +R +Y+I + E
Sbjct: 847 VYIIQTWALRLLYQITSIWE 866
>SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase
Cka1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 23.4 bits (48), Expect = 4.2
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -1
Query: 71 LTNLYHSNIDY*VHIQNKYF 12
L YH+ ++Y V + ++YF
Sbjct: 182 LAEFYHAGMEYNVRVASRYF 201
>SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-
phosphatidyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 23.0 bits (47), Expect = 5.5
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 203 FFFYLH*LFSKYFINTIHSITPKIITFSNMKPKLKY 96
FFF H LFS+ I ++ I S+ P + +
Sbjct: 188 FFFKTHFLFSQLSFECIPHLSDSSIQLSSTSPVIPF 223
>SPAC4D7.08c |ade4|min13, aza1|amidophosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 23.0 bits (47), Expect = 5.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 94 IFTYMYFYSPIYIIQTLTIRYIYRINI 14
IF Y+YF P +I L++ Y R+N+
Sbjct: 267 IFEYVYFARPDSVIDGLSV-YQSRLNM 292
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 22.6 bits (46), Expect = 7.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 134 IITFSNMKPKLKYNFYLHVFLLTN 63
+ITF+ + YNF+ H ++ N
Sbjct: 2042 LITFTELLKNEDYNFWKHPYIKRN 2065
>SPBC16A3.12c |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 443
Score = 22.6 bits (46), Expect = 7.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 179 FSKYFINTIHSITPKII 129
FS YF++ I + PKI+
Sbjct: 245 FSNYFVDYIVKVNPKIM 261
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 22.6 bits (46), Expect = 7.3
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -2
Query: 85 YMYFYSPIYIIQTLTIRYIY 26
Y Y+++P+Y+ Q L + Y
Sbjct: 573 YRYWWTPVYVNQELRCKNAY 592
>SPAC23C4.06c |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 327
Score = 22.2 bits (45), Expect = 9.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 159 HNSFNNTKDYNIL 121
H SF+N KD N+L
Sbjct: 175 HYSFSNRKDINVL 187
>SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 756
Score = 22.2 bits (45), Expect = 9.7
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = -1
Query: 167 FINTIHSITPKIITFSNM 114
F+ T+H + P+ IT+ ++
Sbjct: 21 FVETLHELLPEDITYDDL 38
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,775
Number of Sequences: 5004
Number of extensions: 10857
Number of successful extensions: 33
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 2,362,478
effective HSP length: 47
effective length of database: 2,127,290
effective search space used: 42545800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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