Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2m09
         (203 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   3.4  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    19   4.5  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    19   4.5  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    19   4.5  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    19   4.5  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    19   4.5  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    19   4.5  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    19   4.5  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    19   4.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    19   5.9  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 19.8 bits (39), Expect = 3.4
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 105 FRFHVRECYNLW 140
           FR  V EC  LW
Sbjct: 249 FRIQVDECDRLW 260


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 159 HNSFNNTKDYN 127
           +N++NN  +YN
Sbjct: 94  YNNYNNNNNYN 104


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 159 HNSFNNTKDYN 127
           +N++NN  +YN
Sbjct: 94  YNNYNNNNNYN 104


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 159 HNSFNNTKDYN 127
           +N++NN  +YN
Sbjct: 94  YNNYNNNNNYN 104


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 159 HNSFNNTKDYN 127
           +N++NN  +YN
Sbjct: 94  YNNYNNNNNYN 104


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 159 HNSFNNTKDYN 127
           +N++NN  +YN
Sbjct: 94  YNNYNNNNNYN 104


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 159 HNSFNNTKDYN 127
           +N++NN  +YN
Sbjct: 94  YNNYNNNNNYN 104


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 159 HNSFNNTKDYN 127
           +N++NN  +YN
Sbjct: 94  YNNYNNNNNYN 104


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 159 HNSFNNTKDYN 127
           +N++NN  +YN
Sbjct: 94  YNNYNNNNNYN 104


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.0 bits (37), Expect = 5.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +2

Query: 29  YVPNSQCLND 58
           Y+PN++  ND
Sbjct: 365 YIPNTEVFND 374


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,031
Number of Sequences: 438
Number of extensions: 736
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2785926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)