Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2m07
(708 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 48 2e-06
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 37 0.002
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 35 0.013
SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb... 34 0.017
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 31 0.12
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 31 0.12
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.16
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 30 0.28
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 30 0.37
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 29 0.86
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 28 1.5
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 27 2.6
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 27 3.5
SPAC16E8.12c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 3.5
SPBC12C2.01c ||SPBC17F3.03c|sequence orphan|Schizosaccharomyces ... 26 4.6
SPAPB24D3.01 ||SPAPB2C8.02|transcription factor |Schizosaccharom... 26 6.1
SPAC630.05 |gyp7||GTPase activating protein Gyp7 |Schizosaccharo... 26 6.1
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 26 6.1
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 26 6.1
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 26 6.1
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 25 8.0
SPAC3F10.10c |map3||pheromone M-factor receptor |Schizosaccharom... 25 8.0
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 8.0
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 47.6 bits (108), Expect = 2e-06
Identities = 44/202 (21%), Positives = 91/202 (45%), Gaps = 16/202 (7%)
Frame = +2
Query: 98 VIALIASLGFFTHGIQTANLTS------TAHSGHFINTDHVPWSTTALVITAAIAGPVFC 259
V+A A +G G T ++ T+ GH + + T+A + A + G +
Sbjct: 89 VLAFAAGIGGLLFGYDTGVISGALVVIGTSLGGHELTNGGKEFITSATSLGALLGGIIAG 148
Query: 260 FTIDRHGRKMGIFIIN-LVQGASLIPLFFLNDTSTIILHVIAGMATGGLFTVCPIYIQEI 436
D GRK I I + ++ S++ + + I+ + G G + P+Y+ EI
Sbjct: 149 ALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLYLSEI 208
Query: 437 SSLKTKGFSMCVTMVMTAAGYMMRLVM-----NLEERMFFMVALVM----FQFILMVFVL 589
+ K +G + + +++ AG ++ + ++ +MV L M FQ +++++
Sbjct: 209 APSKIRGRLVIIYVLLITAGQVIAYGIDTAFEHVHNGWRWMVGLAMVPAAFQLFILIWLP 268
Query: 590 ESPSYLMMKRKFETASTLIAKL 655
ESP L+ K + + A +A++
Sbjct: 269 ESPRLLVKKERSQEAYNTLARI 290
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 37.1 bits (82), Expect = 0.002
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 5/118 (4%)
Frame = +2
Query: 158 TSTAHSGHFINTDHVPWSTTALVITAAIAGPVFCFTIDRHGRKMGIFIINLVQGASLIPL 337
T T F V W+ TA +I+ P+F D +GRK + V G
Sbjct: 112 TYTKIGAEFGKFSQVSWTATAYMISCTAFQPLFGKFCDIYGRKKTLLAAYCVFGIGC--- 168
Query: 338 FFLNDTS-----TIILHVIAGMATGGLFTVCPIYIQEISSLKTKGFSMCVTMVMTAAG 496
FL TS + IAG+ GG+ + I + +I LK +G + V A G
Sbjct: 169 -FLCGTSRSLWQLVAARAIAGIGGGGMNSTVSILMSDIVPLKQRGTYQGIINVFFAIG 225
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 34.7 bits (76), Expect = 0.013
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 19/161 (11%)
Frame = +2
Query: 269 DRHGRK---MG---IFIINLVQGASLIPLFFLNDTSTIILHVIAGMATGGLFTVCPIYIQ 430
DR G++ MG ++I ++ + IP + ++ + G+ G L + P Y
Sbjct: 81 DRFGKRKCIMGWTLVYITGVIVQLTTIPSW----VQMMVAKIWTGLGIGALSVIAPGYQS 136
Query: 431 EISSLKTKGFSMCVTMVMTAAGYMMRLVMNL-----------EERMFFMVALV--MFQFI 571
E S +G + + G + +N+ + R+ + L+ + F
Sbjct: 137 ESSPPHIRGAIVTTYQLFITLGIFIAACINMGTHKYTTHPEAQWRVPIGINLLWGILMFF 196
Query: 572 LMVFVLESPSYLMMKRKFETASTLIAKLRGLDEDNPNVTKE 694
M+F+ ESP YL +K + E ++ + GL D+P + KE
Sbjct: 197 GMLFLPESPRYLAVKGRNEECMKILTRNAGLPADHPIMQKE 237
>SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 34.3 bits (75), Expect = 0.017
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = -3
Query: 613 HHQITRRLQYEDHQNKLEHHQCHHKEHPLFEIHHQSHHVSCCGHHHRYAH 464
H L+ HH H + ++HH+ HH HHH ++H
Sbjct: 266 HESSNSNLKKSSESGSTNHHNNHESDK---DLHHEGHHHHHHHHHHHHSH 312
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 31.5 bits (68), Expect = 0.12
Identities = 36/178 (20%), Positives = 72/178 (40%), Gaps = 18/178 (10%)
Frame = +2
Query: 215 TALVITAAIAGPVFCFTI-DRHGRKMGI------FIINLVQGASLIPLFFLNDTSTIILH 373
T +V ++ G + I DR G+++ I +II ++ + +P + ++
Sbjct: 66 TGMVNVGSLFGCIISSPIADRFGKRLSIIGFCAVYIIGIIVQVTAVPSW----VQIMVAK 121
Query: 374 VIAGMATGGLFTVCPIYIQEISSLKTKGFSMCVTMVMTAAGYMMRLVMNLEERMFFMVAL 553
+ G+ G L + P Y E + +G + + G + +N+ A
Sbjct: 122 IWTGIGIGALSVLAPGYQSETAPPSIRGTVVVTYQLFVTGGIFIAACINMGTHKLHKTAQ 181
Query: 554 --------VMFQFILMVFVL---ESPSYLMMKRKFETASTLIAKLRGLDEDNPNVTKE 694
+++ I M+ +L ESP YL+ K E A ++++ L D+ V E
Sbjct: 182 WRVSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLSESAELFPDSEEVQNE 239
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 31.5 bits (68), Expect = 0.12
Identities = 28/140 (20%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Frame = +2
Query: 290 GIFIINLVQGASLIPLFFLNDTSTIILHVIAGMATGGLFTVCPIYIQEISSLKTKGFSMC 469
G++II + + +P + ++ ++AG+ G L + P Y E++ + +G +
Sbjct: 94 GVYIIAELLLVTAVPSWI----QVLVGKILAGVGIGALSVLSPGYQSEVAPPQIRGAVVA 149
Query: 470 VTMVMTAAGYMMRLVMNLEERMFFMVAL--------VMFQFILMVFVL---ESPSYLMMK 616
+ + ++ +N+ A +++ +LMV VL ESP YL+ K
Sbjct: 150 TYQIFSTGAALVAACINMGTHKLRKTASWRTSFGINMLWGILLMVGVLFLPESPRYLIYK 209
Query: 617 RKFETASTLIAKLRGLDEDN 676
+ E A ++ + L ++
Sbjct: 210 GRDEEALRIMCNMAELSPES 229
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.1 bits (67), Expect = 0.16
Identities = 29/149 (19%), Positives = 62/149 (41%), Gaps = 11/149 (7%)
Frame = +2
Query: 293 IFIINLVQGASLIPLFFLNDTSTIILHVIAGMATGGLFTVCPIYIQEISSLKTKGFSMCV 472
I++I ++ + +P + ++ + G+ G L + P Y E++ +G +
Sbjct: 95 IYLIGVIIQVTAVPSW----VQIMVAKIWTGLGIGALSVLAPGYQSEVAPPHIRGTIVVT 150
Query: 473 TMVMTAAGYMMRLVMNLEERMFFMVAL--------VMFQFILMV---FVLESPSYLMMKR 619
+ AG + +N+ + A +++ I +V F+ ESP YL+
Sbjct: 151 YQLCVTAGIFIAACINMGTHKLYKTAQWRVSIGINLLWGIITLVGVSFLSESPRYLVSIG 210
Query: 620 KFETASTLIAKLRGLDEDNPNVTKELKYL 706
K + A ++ K L D+ + E K +
Sbjct: 211 KDDEAIQVMCKNAELPPDSDIIQTEYKQI 239
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 30.3 bits (65), Expect = 0.28
Identities = 29/140 (20%), Positives = 59/140 (42%), Gaps = 11/140 (7%)
Frame = +2
Query: 290 GIFIINLVQGASLIPLFFLNDTSTIILHVIAGMATGGLFTVCPIYIQEISSLKTKGFSMC 469
G +II + + +P + ++ + G+ G L + P Y E++ + +G +
Sbjct: 94 GCYIIGQILLVTAVPSW----VQIMVGKLFTGLTIGALSVLSPGYQSEVAPPQIRGAVVS 149
Query: 470 VTMVMTAAGYMMRLVMNLEERMFFMVAL--------VMFQFILMVFVL---ESPSYLMMK 616
+ G ++ +N+ A +++ LMV VL ESP YL+ K
Sbjct: 150 TYQLFQTCGTLIAACINMGTHKLRKTASWRTSFGINILWGIFLMVGVLFLPESPRYLIYK 209
Query: 617 RKFETASTLIAKLRGLDEDN 676
+ E A ++ + LD ++
Sbjct: 210 GRDEEALRIMCQTAELDPES 229
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 29.9 bits (64), Expect = 0.37
Identities = 35/174 (20%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Frame = +2
Query: 215 TALVITAAIAGPVFCFTI-DRHGRKMGIFIINLVQ--GASLIPLFFLNDTSTIILHVIAG 385
T +V ++ G + + DR G+++ I +V G L + ++ + G
Sbjct: 62 TGMVNVGSMTGCILSSPLMDRIGKRVSIMFWTIVYLIGIILQVTAVPSWVQIMVAKIWTG 121
Query: 386 MATGGLFTVCPIYIQEISSLKTKGFSMCVTMVMTAAGYMMRLVMNL---------EERMF 538
+A G L + P + E++ +G + + G + +N+ + R+
Sbjct: 122 LAIGALSVLAPGFQSEVAPATLRGTIVTTYQLAVTGGIFIAACINMGTHKLHKTAQWRVS 181
Query: 539 FMVALV--MFQFILMVFVLESPSYLMMKRKFETASTLIAKLRGLDEDNPNVTKE 694
+ L+ + FI + F+ ESP YL+ K E A ++ K L ++ + E
Sbjct: 182 MGINLLWGIIMFIGISFLPESPRYLIAIGKDEEALDIMCKNNVLPREHEIIQTE 235
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 28.7 bits (61), Expect = 0.86
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = +2
Query: 194 DHVPWSTTALVITAAIAGPVFCFTIDRHGRKMGIFIINLVQGASLIPLFFLNDTSTI--- 364
++ + TA +IT P++ D GR+ + N A + F+ + ++
Sbjct: 66 NNASYIVTAYLITNTAFQPLYGRLSDIFGRRPTVVFAN---AAFTLGTFWCGISRSLPEL 122
Query: 365 -ILHVIAGMATGGLFTVCPIYIQEISSLKTKGFSMCVTMVMTAAG 496
+ +AG+ GGL T+ I +I SL+ +G +T ++ G
Sbjct: 123 CMARALAGIGGGGLGTMSSIISSDIVSLRERGTWQGITNIVWGIG 167
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 27.9 bits (59), Expect = 1.5
Identities = 26/145 (17%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Frame = +2
Query: 293 IFIINLVQGASLIPLFFLNDTSTIILHVIAGMATGGLFTVCPIYIQEISSLKTKGFSMCV 472
+++I ++ + +P + ++ + G++ G L + P + E++ +G +
Sbjct: 95 VYLIGIILQVTAVPSW----VQIMVAKIWTGLSIGALSVLAPGFQSEVAPADLRGTIVTT 150
Query: 473 TMVMTAAGYMMRLVMNL---------EERMFFMVALV--MFQFILMVFVLESPSYLMMKR 619
+ G + +N+ + R+ + L+ + FI + F+ ESP YL+
Sbjct: 151 YQLAVTGGIFIAACINMGTHKLHKTAQWRVSMGINLLWGIITFIGISFLPESPRYLISVG 210
Query: 620 KFETASTLIAKLRGLDEDNPNVTKE 694
+ E A ++AK L ++ + E
Sbjct: 211 RDEEALQIMAKNNDLPIEHEVIQTE 235
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +2
Query: 332 PLFFLNDTSTIILHVIAGM-ATGG 400
P+F+LNDTS ++ V+ + AT G
Sbjct: 273 PIFYLNDTSRAVIRVVENINATAG 296
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 26.6 bits (56), Expect = 3.5
Identities = 19/95 (20%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +2
Query: 218 ALVITAAIAGPVFCFTIDRH-GRKMGIFIINLVQGASLIPLFFLNDTSTIIL-HVIAGMA 391
+L + +GP+ I GRK+ + + + I + D T+++ +G
Sbjct: 140 SLYVCGFASGPILWAPISELVGRKIPLIVGMFMFSIFSIAVAVAKDVQTVMICRFFSGFC 199
Query: 392 TGGLFTVCPIYIQEISSLKTKGFSMCVTMVMTAAG 496
+V ++ KT+G ++C+ +T AG
Sbjct: 200 ASSPLSVVAAAFADMFDNKTRGPAVCIFACITFAG 234
>SPAC16E8.12c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 170
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 400 LIHRMPNIHPRNIIAKNKRLLNVRNDGDDRSRIHDAIGDES 522
L++R ++ RN++A+N LL +D R + H A+ E+
Sbjct: 14 LLNRDTSVERRNLVARNLSLLLKSDDVQTRKKSHIAMYAEA 54
>SPBC12C2.01c ||SPBC17F3.03c|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 318
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +1
Query: 382 RHGHWRLIHRMPNIHPRNIIAKNKRLLNVRNDGDDRSRIHDAI 510
R H +L++ + N+ N + RLL++ + + +HD I
Sbjct: 125 RESHLKLLNELQNVKDTNDLKDRIRLLHLNSSSKLNAFLHDLI 167
>SPAPB24D3.01 ||SPAPB2C8.02|transcription factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 594
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 343 SKRYKHNHSTRNRRHGHWRLIHRMPNIHPRNIIAKNKRLLN 465
SKR K ++S +++G+ L +P++ P I +LN
Sbjct: 41 SKRLKRSYSATKKKNGNPVLESAIPSLSPSPSIENGSAMLN 81
>SPAC630.05 |gyp7||GTPase activating protein Gyp7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 260 FTIDRHGRKMGIFIINL-VQGASLIPLFFLND 352
F R+G G +INL G SL PLFF +D
Sbjct: 129 FRPPRYGWNYGSIVINLRDSGESLPPLFFHDD 160
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 141 MPCVKNPKLAMRAMTTPRHTLPRSTSLVITTRS 43
+P + + A RAMT+PR LPR + +RS
Sbjct: 503 VPSTPSVRSASRAMTSPRTPLPRVKNTQNPSRS 535
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 44 DRVVITKDVERGSVWRGVVIAL 109
D V D+ERG VW V+I L
Sbjct: 393 DEVHYVNDLERGVVWEEVIIML 414
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 277 WKENGNFYY*SGSRCFLNTLVLSKRYKHNHSTRNRRHGHWRLIHRMPNI 423
W + G+ + G F LVL + +KHN+ + R + H++P+I
Sbjct: 72 WSDRGDSFLVIGHEDFAK-LVLPRYFKHNNFSSFVRQLNMYGFHKVPHI 119
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.4 bits (53), Expect = 8.0
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Frame = +2
Query: 5 SDSRLVMVYTVNCDRVVITKDVE----RGSVWRGVVIALIA-----SLGFFTHGIQTANL 157
S S L Y D +I K+V+ +++RG+ LI S+ FF++G L
Sbjct: 92 SKSPLTAAYRHFMDTCIILKNVKVHEGTRALFRGLGPNLIGTIPARSINFFSYGNGKRIL 151
Query: 158 TSTAHSGHFINTDHVPWSTTALVITAAIAGPVF 256
++G + H+ + A VIT+A P++
Sbjct: 152 ADLFNNGQENSQIHLMAAAIAGVITSAATNPIW 184
>SPAC3F10.10c |map3||pheromone M-factor receptor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 365
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 262 ETKHWTGYGCCDH*SSCTPRYVVC 191
ET W GYG CD T R V C
Sbjct: 61 ETIRWMGYGLCD----ITSRIVTC 80
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 11 SRLVMVYTVNCDRVVITKDVERGSVW 88
SR +++ V R TKDVE+ +W
Sbjct: 451 SRFEILFPVKLQREDFTKDVEKSDLW 476
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,943,771
Number of Sequences: 5004
Number of extensions: 62711
Number of successful extensions: 200
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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