Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2k16
         (714 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    44   1e-06
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                39   4e-05
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    38   7e-05
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    28   0.076
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    28   0.076
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   0.94 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    25   0.94 
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              21   8.8  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 44.4 bits (100), Expect = 1e-06
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +3

Query: 465 QLISRIEDIHYRNFIHRDIKPDNFLMGLGKKGNLVYIIDFGLA 593
           Q++  +   H+   +HRD+KP+N L+    KG  V + DFGLA
Sbjct: 17  QILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 59


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 39.1 bits (87), Expect = 4e-05
 Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 1/150 (0%)
 Frame = +3

Query: 141 LRVGNKYRLGRKIGSGSFGDIYLGTNIVTREEVAIKLECIKTRHPQLHIESKFYKLMQGR 320
           L+ G   + G  +GSG FG +Y    +   E+VA K+  I+T      + S+ +      
Sbjct: 61  LKDGFPIKCGTFLGSGGFGIVYKA--LYKGEQVAAKI--IQTEKYSNMLNSEKHASFLKH 116

Query: 321 VGIPAIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTV-LLLADQLISRIEDIHY 497
             I  +         +++ MEL G +L+   N       +K   + +   +   ++  H 
Sbjct: 117 SNIVKVLMIEQGASLSLITMELCGTTLQ---NRLDEAILIKNERICILKSITCALQFCHN 173

Query: 498 RNFIHRDIKPDNFLMGLGKKGNLVYIIDFG 587
              +H D+KP N LM    K     + DFG
Sbjct: 174 AGIVHADVKPKNILM---SKNGQPKLTDFG 200


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 38.3 bits (85), Expect = 7e-05
 Identities = 18/44 (40%), Positives = 29/44 (65%)
 Frame = +3

Query: 468 LISRIEDIHYRNFIHRDIKPDNFLMGLGKKGNLVYIIDFGLAKK 599
           ++   + +H RN I+RD+KP+N L  L  +G  V ++DFG AK+
Sbjct: 475 VVEAFDYLHSRNIIYRDLKPENLL--LDSQG-YVKLVDFGFAKR 515


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 28.3 bits (60), Expect = 0.076
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +3

Query: 417 FCSRRFSLKTV--LLLADQLISRIEDIHYRNFIHRDIKPDNFLMGLGKKGNLVYIIDFG 587
           +C  R  L  +  + +A  ++  I  +H +  +HRD+K  N L+ +  +  L    DFG
Sbjct: 687 YCGIRAGLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLT---DFG 742


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 28.3 bits (60), Expect = 0.076
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +3

Query: 417 FCSRRFSLKTV--LLLADQLISRIEDIHYRNFIHRDIKPDNFLMGLGKKGNLVYIIDFG 587
           +C  R  L  +  + +A  ++  I  +H +  +HRD+K  N L+ +  +  L    DFG
Sbjct: 725 YCGIRAGLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLT---DFG 780


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 15/68 (22%), Positives = 33/68 (48%)
 Frame = +3

Query: 396 SLEDLFNFCSRRFSLKTVLLLADQLISRIEDIHYRNFIHRDIKPDNFLMGLGKKGNLVYI 575
           SL+        +F +  ++ +   + S ++ +   N++HRD+   N L+       +  I
Sbjct: 720 SLDTFLRANDGKFQVLQLVGMLRGIASGMQYLAEMNYVHRDLAARNVLVNAAL---VCKI 776

Query: 576 IDFGLAKK 599
            DFGL+++
Sbjct: 777 ADFGLSRE 784


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +3

Query: 387 LGPSLEDLFNFCSRRFSLK 443
           +G ++EDL +FC + +++K
Sbjct: 452 MGETIEDLLHFCRQMYAMK 470


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 336 LQEFQLFLALVCKICFLCVTVD 271
           L+EFQ+ L  V  IC +  ++D
Sbjct: 19  LEEFQIGLRAVVPICRIETSID 40


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,222
Number of Sequences: 438
Number of extensions: 4725
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)