Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2k11
         (820 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    27   0.69 
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    27   0.69 
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   2.8  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   4.9  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   8.6  

>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 27.1 bits (57), Expect = 0.69
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 188 HFVFKYYSILLCAQ*RFSWLTSHFAVSPLFSILSNL 81
           HF+F+Y +  +  +  +SW T    +   F+IL NL
Sbjct: 27  HFLFRYVTGPILIRKVYSWWTLAMVLIQFFAILGNL 62


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 27.1 bits (57), Expect = 0.69
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 188 HFVFKYYSILLCAQ*RFSWLTSHFAVSPLFSILSNL 81
           HF+F+Y +  +  +  +SW T    +   F+IL NL
Sbjct: 27  HFLFRYVTGPILIRKVYSWWTLAMVLIQFFAILGNL 62


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 477 RSHDLRG-LYLLVCDLSALADAPVSDLPVRLVNFADRAHWA 358
           R H L G L LLVC L A+   PVS  P   +   +  +WA
Sbjct: 14  RRHLLTGSLLLLVCLLLAIDPTPVSADPDEDIPHNEVRNWA 54


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 19/59 (32%), Positives = 26/59 (44%)
 Frame = +3

Query: 345  RPSRRPNGRDQQSSQVGPEDRTPAXXXXXXDHIQEDTVLADHGIDTARHPARYRRPSVE 521
            R S   NG  +QSS  G      A       +  +D    ++  D AR   +YRRP+VE
Sbjct: 1178 RSSATNNGGGRQSSNNG----LGAGGRTNFAYQVDDDFDDNYSDDDAREEMQYRRPTVE 1232


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = +2

Query: 398 GRSDTG-ASARAERSHTRRYSPRRSWDR 478
           GR  TG     AER   RR  PRR  DR
Sbjct: 319 GRLRTGPVPGAAERHRRRRPPPRRRHDR 346


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,575
Number of Sequences: 2352
Number of extensions: 17345
Number of successful extensions: 39
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)