Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2k11
(820 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003130-8|AAB54130.2| 611|Caenorhabditis elegans Pip kinase pr... 188 6e-48
AC024798-4|AAK29922.1| 401|Caenorhabditis elegans Pip kinase pr... 47 2e-05
U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine rece... 33 0.25
Z67879-6|CAA91791.2| 1482|Caenorhabditis elegans Hypothetical pr... 32 0.57
AL023817-1|CAA19436.2| 1482|Caenorhabditis elegans Hypothetical ... 32 0.57
AF038621-4|AAK71387.2| 1064|Caenorhabditis elegans Hypothetical ... 31 1.3
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.3
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 30 2.3
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 29 5.3
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 29 5.3
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 29 5.3
AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone deace... 29 5.3
AF016442-3|AAB65917.2| 597|Caenorhabditis elegans Hypothetical ... 29 5.3
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 28 7.0
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 28 7.0
U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical pr... 28 7.0
U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical pr... 28 7.0
U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical pr... 28 7.0
U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 28 7.0
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 28 7.0
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 28 7.0
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 28 7.0
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr... 28 9.2
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 28 9.2
U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily ass... 28 9.2
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 28 9.2
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 28 9.2
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 28 9.2
>AF003130-8|AAB54130.2| 611|Caenorhabditis elegans Pip kinase
protein 1 protein.
Length = 611
Score = 188 bits (457), Expect = 6e-48
Identities = 83/137 (60%), Positives = 110/137 (80%)
Frame = +1
Query: 400 KIGHRRVGEGGEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDLLMQDFMTVETTNFP 579
K+GHRR+ E G ++YKK+ ++ +M +IQLGI ++IG LAS P RD+L+QDF V+ FP
Sbjct: 66 KLGHRRIDEQGGVSYKKVPTNALMQAIQLGISNSIGSLASLPNRDVLLQDFEKVDIVAFP 125
Query: 580 HEGSNHTPAHHYSEFKFKTYAPIAFRYFRDLFGIQPDDFLMSMCSAPLRELSNPGASGSI 759
GS TP+H + +F+F+TYAPIAFRYFR+LF I+P DFL S+C+ PL+ELSN GASGSI
Sbjct: 126 AAGSTITPSHSFGDFRFRTYAPIAFRYFRNLFHIKPADFLRSICTEPLKELSNAGASGSI 185
Query: 760 FYLTNDDEFIIKTVQHK 810
FY++ DD+FIIKTVQHK
Sbjct: 186 FYVSQDDQFIIKTVQHK 202
>AC024798-4|AAK29922.1| 401|Caenorhabditis elegans Pip kinase
protein 2 protein.
Length = 401
Score = 46.8 bits (106), Expect = 2e-05
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Frame = +1
Query: 466 IMGSIQLGIQHAIGGLASKPERDLLM-QDFMTVETTNFPHEGSNHT--PAHHYSEFKFKT 636
++ GI H + L P LLM DF + N P+H +K K
Sbjct: 31 VLSVFMWGINHTVDQLLHVPPPGLLMPDDFKAYSKVKIDNHNFNKDIMPSH----YKVKE 86
Query: 637 YAPIAFRYFRDLFGIQPDDFLMSMCS-APLRELSNPGASGSI--FYLTNDDEFIIKTV 801
Y P FR R+ FG+ ++L S+ S P +L + A S F+++ D +F+IK++
Sbjct: 87 YCPNVFRNLREQFGVDNFEYLRSLTSYEPEPDLLDGSAKDSTPRFFISYDKKFVIKSM 144
>U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein212 protein.
Length = 330
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -2
Query: 270 LRLFQNRTFHHFYVI*IARSHFCFTFTSLCIQVLFNSFMCTVTILMAHFALRGITTIQYS 91
L F N+ ++F VI ++ F T +CI V + F ++AH + +++++ S
Sbjct: 267 LLYFHNQAINNFIVIIVSSHGFFSTIVMICIHVPYREFTLRWLTVLAHVRMENLSSVRPS 326
>Z67879-6|CAA91791.2| 1482|Caenorhabditis elegans Hypothetical protein
VF11C1L.1 protein.
Length = 1482
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 652 FRYFRDLFGIQPDDFLMSMCSAPLRELSNPGASGSIFYLTNDDEFIIK 795
FR R+L + ++ + S G SGS FY T DD F++K
Sbjct: 1218 FRKLRELLIAEGEETFIRSLSNSTFWTPQGGKSGSFFYRTQDDRFVVK 1265
>AL023817-1|CAA19436.2| 1482|Caenorhabditis elegans Hypothetical
protein VF11C1L.1 protein.
Length = 1482
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 652 FRYFRDLFGIQPDDFLMSMCSAPLRELSNPGASGSIFYLTNDDEFIIK 795
FR R+L + ++ + S G SGS FY T DD F++K
Sbjct: 1218 FRKLRELLIAEGEETFIRSLSNSTFWTPQGGKSGSFFYRTQDDRFVVK 1265
>AF038621-4|AAK71387.2| 1064|Caenorhabditis elegans Hypothetical
protein M116.5 protein.
Length = 1064
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 238 VMESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGPMGAISK 381
++E S +SE+ VA+ R S+ EK Y P VGP + K
Sbjct: 1017 IVEPSSPSQSESRASPEVADRQKRISLSLKEKGKRYSPQVGPSSSTPK 1064
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 37 YTTDSFRKVIDFFL-IKLERILNSGDTAKCEVSHENRYCAHKRIE*YLNTK*CKSETKMA 213
Y+ +F V F L I L + N D K +++HE ++C H + + +S K A
Sbjct: 15 YSAVTFSVVAVFSLCITLPLVYNYVDGIKTQINHEIKFCKHSARDIFAEVNHIRSSPKNA 74
Query: 214 S 216
S
Sbjct: 75 S 75
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 260 KSLRTLRSSQSPRTMIATGVRSPKKMYLTTQPSAQWARSAKFTSRTGRSDTGAS-ARAER 436
+SL + + R + +G R+P + + S RS + + RS R R
Sbjct: 305 RSLSKSPARRRSRHLSRSGSRTPAQRHSRRSESTSRRRSGRHSRSRSRSPPRKRPVRRSR 364
Query: 437 SHTRRYSPRRSWDR 478
S +R +P R+W R
Sbjct: 365 SRSRSRTPNRNWTR 378
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 241 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 363
++ S + S TE + EDDD + S NVP VGP
Sbjct: 620 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 660
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 241 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 363
++ S + S TE + EDDD + S NVP VGP
Sbjct: 654 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 694
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 241 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 363
++ S + S TE + EDDD + S NVP VGP
Sbjct: 750 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 790
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 37 YTTDSFRKVIDFFL-IKLERILNSGDTAKCEVSHENRYCAHKRIE*YLNTK*CKSETKMA 213
Y+ +F V F L I L + N D K +++HE ++C H + + + K A
Sbjct: 15 YSAVTFSTVAVFSLCITLPLVYNYVDGIKTQINHEIKFCKHSARDIFAEVNHIRGSPKNA 74
Query: 214 S 216
S
Sbjct: 75 S 75
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 241 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 363
++ S + S TE + EDDD + S NVP VGP
Sbjct: 620 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 660
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 241 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 363
++ S + S TE + EDDD + S NVP VGP
Sbjct: 654 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 694
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 241 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 363
++ S + S TE + EDDD + S NVP VGP
Sbjct: 750 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 790
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 28.7 bits (61), Expect = 5.3
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Frame = +1
Query: 157 KRIE*YLNTK*CKSETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDRD---RSSIA 327
K+I LN K K E K S + + E LKK + + V EDDD D
Sbjct: 162 KKITDRLNEKAVKEEPK--SKNDQILNPRELRKLKKQQKTAKVEVVEDDDDDDDEDDDDV 219
Query: 328 EKNVPYDPAVGPMGAISKVHKSDRKIGHRRVGE 426
E P +P+ + K D+ ++ V E
Sbjct: 220 EAPAPQEPSRKQKAHNQREEKKDKNKKYQPVKE 252
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 28.7 bits (61), Expect = 5.3
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Frame = +1
Query: 157 KRIE*YLNTK*CKSETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDRD---RSSIA 327
K+I LN K K E K S + + E LKK + + V EDDD D
Sbjct: 162 KKITDRLNEKAVKEEPK--SKNDQILNPRELRKLKKQQKTAKVEVVEDDDDDDDEDDDDV 219
Query: 328 EKNVPYDPAVGPMGAISKVHKSDRKIGHRRVGE 426
E P +P+ + K D+ ++ V E
Sbjct: 220 EAPAPQEPSRKQKAHNQREEKKDKNKKYQPVKE 252
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 241 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 363
++ S + S TE + EDDD + S NVP VGP
Sbjct: 654 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 694
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 241 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 363
++ S + S TE + EDDD + S NVP VGP
Sbjct: 750 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 790
>AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone
deacetylase protein 4 protein.
Length = 755
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 250 SVLKKSENATEQSVAEDDDRDR-SSIAEKNVPYDPAVGPMGAISKVHKS 393
S+ + ++ + + E DD R SS+A +++P AV + + +HKS
Sbjct: 670 SISEAAQQCVQALIGESDDAGRLSSVALESLPNPSAVETLQKVIAIHKS 718
>AF016442-3|AAB65917.2| 597|Caenorhabditis elegans Hypothetical
protein K12B6.2 protein.
Length = 597
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +1
Query: 85 LERILNSGDTAKCEVSHENRYCAHKRIE*YLNTK*CKSETKMA--SGDSDHIEVMESSVL 258
+E+++ G A VS E R +E L T+ K + K+ G + IE + +L
Sbjct: 164 IEKLMAKGIRAMKAVSRETRALITPFME-LLKTEKTKIDKKIEIERGQLEDIEKRKQRIL 222
Query: 259 KKSENATEQSVAEDDDRDRS 318
K E + +S+ E+D R+
Sbjct: 223 KMWEKSMNRSLTEEDKMSRN 242
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 37 YTTDSFRKVIDFFL-IKLERILNSGDTAKCEVSHENRYCAHKRIE*YLNTK*CKSETKMA 213
Y+ +F V F L I L + N D K +++HE ++C H + + + K A
Sbjct: 15 YSAVTFSVVAVFSLCITLPLVYNYVDGIKTQINHEIKFCKHSARDIFAEVNHIRGSPKNA 74
Query: 214 S 216
S
Sbjct: 75 S 75
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 37 YTTDSFRKVIDFFL-IKLERILNSGDTAKCEVSHENRYCAHKRIE*YLNTK*CKSETKMA 213
Y+ +F V F L I L + N D K +++HE ++C H + + + K A
Sbjct: 15 YSAVTFSVVAVFSLCITLPLVYNYVDGIKTQINHEIKFCKHSARDIFAEVNHIRGSPKNA 74
Query: 214 S 216
S
Sbjct: 75 S 75
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +1
Query: 184 K*CKSETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDRDRSSIAEKN 336
K KS+ +S + + EV E S KKS +T+++ ++DD+ + +K+
Sbjct: 191 KSAKSKDDDSSDEEEEEEVKEKSP-KKSSKSTKRAASDDDEEEEPVATKKS 240
>U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical
protein C17C3.12c protein.
Length = 220
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 367 GAISKVHKSDRKIGHRRV----GEGGEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERD 534
G I++VH + ++ + G+G + + + +S+I+ Q+G+QH I + ++ E
Sbjct: 71 GTIAQVHLNSVRVPKTSIVGEYGKGYKYAIEVLNASRIVIGAQMGLQHQIAKIQTEIEAA 130
Query: 535 LLM 543
LM
Sbjct: 131 RLM 133
>U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical
protein C17C3.12b protein.
Length = 307
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 367 GAISKVHKSDRKIGHRRV----GEGGEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERD 534
G I++VH + ++ + G+G + + + +S+I+ Q+G+QH I + ++ E
Sbjct: 158 GTIAQVHLNSVRVPKTSIVGEYGKGYKYAIEVLNASRIVIGAQMGLQHQIAKIQTEIEAA 217
Query: 535 LLM 543
LM
Sbjct: 218 RLM 220
>U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical
protein C05D10.4b protein.
Length = 597
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 480 TARHPARYRRPSVEART-RSTHAGLHDRRDDEFPPRGIEPHARP 608
++ HP+ YR S++A RS+ A H FP RG++ + P
Sbjct: 65 SSAHPS-YRSHSIDAAVNRSSSACFHSPHRPSFPSRGLQKYDYP 107
>U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical
protein C05D10.4a protein.
Length = 565
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 480 TARHPARYRRPSVEART-RSTHAGLHDRRDDEFPPRGIEPHARP 608
++ HP+ YR S++A RS+ A H FP RG++ + P
Sbjct: 33 SSAHPS-YRSHSIDAAVNRSSSACFHSPHRPSFPSRGLQKYDYP 75
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 374 SAKFTSRTGRSDTGASARAERSHTRRYSPRRS 469
S + TSR R D + R +RSH+R SP S
Sbjct: 51 SRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSS 82
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 374 SAKFTSRTGRSDTGASARAERSHTRRYSPRRS 469
S + TSR R D + R +RSH+R SP S
Sbjct: 79 SRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSS 110
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 374 SAKFTSRTGRSDTGASARAERSHTRRYSPRRS 469
S + TSR R D + R +RSH+R SP S
Sbjct: 137 SRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSS 168
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 374 SAKFTSRTGRSDTGASARAERSHTRRYSPRRS 469
S + TSR R D + R +RSH+R SP S
Sbjct: 138 SRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSS 169
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical protein
Y6B3B.1 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +3
Query: 345 RPSRRPNGRDQQSSQVGPEDRTPAXXXXXXDHIQEDTVLADHGIDTA 485
RPS RP R Q+ SQ E DH D + D IDT+
Sbjct: 1622 RPSFRPYRRPQERSQGSHEAAQACRRCSEADHHPSDDSIIDLMIDTS 1668
>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical
protein E03G2.2 protein.
Length = 1503
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 256 LKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGPMGAISKVHKSDRKI 405
LK++E A E+ V DD R+R+ + P GA++ + DR I
Sbjct: 247 LKQTEKAREKQVKLDDKRERARTGSEKAPLLGTFNNYGAVN-LDDKDRVI 295
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform e protein.
Length = 2702
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/109 (17%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Frame = +1
Query: 193 KSETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDR-----DRSSIAEKNVPYDPAV 357
K T + + + +++ E ++ E AE ++ D+S + ++ +PA
Sbjct: 2342 KKTTVIETEQASEVKMREKGEERRKEEKRVSFAAEVQEKTMEAIDKSLGLDTSMEVEPAF 2401
Query: 358 GPMGAISKVHKSDRKIGHRRVGEGGEITYKKIQSSQIMGSIQLGIQHAI 504
I K K +R+ R + + +K ++ + ++ ++ +G H I
Sbjct: 2402 QKPSIIKKPMKKERERRSRDLRQNAAPAFKPVRRNSLLQALAIGSPHNI 2450
>U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform a protein.
Length = 1633
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/109 (17%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Frame = +1
Query: 193 KSETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDR-----DRSSIAEKNVPYDPAV 357
K T + + + +++ E ++ E AE ++ D+S + ++ +PA
Sbjct: 1273 KKTTVIETEQASEVKMREKGEERRKEEKRVSFAAEVQEKTMEAIDKSLGLDTSMEVEPAF 1332
Query: 358 GPMGAISKVHKSDRKIGHRRVGEGGEITYKKIQSSQIMGSIQLGIQHAI 504
I K K +R+ R + + +K ++ + ++ ++ +G H I
Sbjct: 1333 QKPSIIKKPMKKERERRSRDLRQNAAPAFKPVRRNSLLQALAIGSPHNI 1381
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/109 (17%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Frame = +1
Query: 193 KSETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDR-----DRSSIAEKNVPYDPAV 357
K T + + + +++ E ++ E AE ++ D+S + ++ +PA
Sbjct: 7188 KKTTVIETEQASEVKMREKGEERRKEEKRVSFAAEVQEKTMEAIDKSLGLDTSMEVEPAF 7247
Query: 358 GPMGAISKVHKSDRKIGHRRVGEGGEITYKKIQSSQIMGSIQLGIQHAI 504
I K K +R+ R + + +K ++ + ++ ++ +G H I
Sbjct: 7248 QKPSIIKKPMKKERERRSRDLRQNAAPAFKPVRRNSLLQALAIGSPHNI 7296
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 27.9 bits (59), Expect = 9.2
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 6/114 (5%)
Frame = +3
Query: 309 RQEFDRRKKCTLRPSRRPNGRDQQSSQVGPEDRTPAXXXXXXDHIQEDTVLADHGIDTAR 488
R+ +R+ + R RR + D + + PEDRT Q + R
Sbjct: 272 RRSVERQDQREDRRDRRRSPEDPRERRRSPEDRTVRRRSPERRRQQRSPSVERRKSPQRR 331
Query: 489 HPARYRRPSVEARTRSTHAGLHDRRDDEF-----PPRGIEPH-ARPSLFRVQIQ 632
R R S E RST R DE PP E + A+ +L ++++
Sbjct: 332 DERRRRHDSSENERRSTATASKKSRMDELEVKQEPPSDSEDYIAKTNLAPIRVE 385
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +3
Query: 345 RPSRRPNGRDQQSSQVGPEDRTPAXXXXXXDHIQEDTVLADHGIDTA 485
RPS RP R Q+ SQ E DH D + D IDT+
Sbjct: 1622 RPSFRPYRRPQERSQGSHEAAQACRRCSEADHHPSDDSIIDLMIDTS 1668
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,439,736
Number of Sequences: 27780
Number of extensions: 406207
Number of successful extensions: 1343
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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