Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2k08
         (764 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       29   0.12 
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.48 
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      26   1.1  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    25   3.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.4  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    23   7.8  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    23   7.8  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   7.8  

>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 29.5 bits (63), Expect = 0.12
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 476 LTRLSRHCWNSKPNTRLPPDKI 541
           +++L R CW+  PN RLP  +I
Sbjct: 413 MSKLMRECWHMNPNVRLPALRI 434


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.5 bits (58), Expect = 0.48
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = +2

Query: 449 KRLRPKNRKLTRLSRHCWNSKPNTRLPPDKIGSQDPRLQQWPPPHRPMTSPLSIVTSPRR 628
           +++ P  R   R S       P+ R PP +  S+  R   W P  RP + P  +   PRR
Sbjct: 248 RKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPTSW-PRSRPTSKPKRL---PRR 303


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 275 STFVFSALAALRDLTRSPCFVIWSFKS 195
           ST+++  + ALR +T  PCF + +F S
Sbjct: 34  STYLYRTILALRLVTLLPCFNVLTFIS 60


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 124 SITIHLVYNLLQSTQKLNIFLIQHTHTRILIL 29
           S+ +HL   LL  T ++  FL  HT T +L L
Sbjct: 178 SMLLHLAGLLLPITLQMLTFLKNHTKTALLYL 209


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 527 PPDKIGSQDPRLQQWPPPHRP 589
           PP   G Q P +   PPP RP
Sbjct: 248 PPSAQGMQRPPMMGQPPPIRP 268


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 464 KNRKLTRLSRHCWNS 508
           KNRK  R++RH W++
Sbjct: 203 KNRKSRRVTRHNWSA 217


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 464 KNRKLTRLSRHCWNS 508
           KNRK  R++RH W++
Sbjct: 204 KNRKSRRVTRHNWSA 218


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 264  LFGFSSFERSHQISLFCDLVVQI 196
            L G ++ +RSH +SLF + V+ I
Sbjct: 1038 LNGINAGKRSHILSLFANYVIHI 1060


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.129    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,909
Number of Sequences: 2352
Number of extensions: 10358
Number of successful extensions: 83
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)