BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2k05
(716 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089659-1|AAL90397.1| 344|Drosophila melanogaster RH22417p pro... 101 1e-21
AE014298-1941|AAG22352.1| 344|Drosophila melanogaster CG11158-P... 101 1e-21
BT021941-1|AAX51646.1| 362|Drosophila melanogaster RE18811p pro... 97 2e-20
AE014298-1940|AAF48302.1| 362|Drosophila melanogaster CG12177-P... 97 2e-20
AE014134-2209|AAF53198.1| 355|Drosophila melanogaster CG5418-PA... 87 2e-17
AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1 pr... 37 0.024
AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA... 37 0.024
BT003447-1|AAO39450.1| 647|Drosophila melanogaster RH57538p pro... 31 1.6
AE013599-2716|AAM68462.1| 500|Drosophila melanogaster CG17725-P... 31 1.6
AE013599-2715|AAF57676.1| 647|Drosophila melanogaster CG17725-P... 31 1.6
Y00402-1|CAA68463.1| 647|Drosophila melanogaster protein ( Dros... 30 2.7
AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-P... 30 3.6
AY069289-1|AAL39434.1| 1137|Drosophila melanogaster GM14421p pro... 29 4.8
AE014298-2419|AAF48620.1| 1137|Drosophila melanogaster CG9902-PA... 29 4.8
AY135130-2|AAN17634.1| 945|Drosophila melanogaster corkscrew ph... 29 8.4
>AY089659-1|AAL90397.1| 344|Drosophila melanogaster RH22417p
protein.
Length = 344
Score = 101 bits (242), Expect = 1e-21
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 14/194 (7%)
Frame = +3
Query: 111 RKFVIDNDAGGDDA--MAIFLAALFEKYHAGP--QLIGVTTSNGNTNEDNVSYNNQRILK 278
R V D D G DDA +A+ L A G +++ +TT +GNT+ DN + N R+L
Sbjct: 6 RLVVYDCDIGTDDAWGLAMLLRAEELTLREGRTCKVLAITTVHGNTDADNGTLNALRVLH 65
Query: 279 VAKRQDVPIYRGSKSSLV-KTPEITDYF-GKDGLGDSG-----DVYPDLVPPHTENAVNA 437
R+DVP++RG S+V +T E T+ F G+DGL D G DV +L P H AVNA
Sbjct: 66 TLNRRDVPVFRGCYESIVPRTWEYTNCFHGQDGLNDVGNYPVVDVEQELQPEH---AVNA 122
Query: 438 LIQLSKTHEGNLTIITIGALTNLALAIKT-DPAFLGRLAHVYIGAGHIHTEEYPT--AEF 608
+ +L++ + G + + G LTN A I +FL + VYI G+I + T AEF
Sbjct: 123 MYRLARANPGQVDFLLCGPLTNFANCINLYGNSFLTNIGRVYIMGGNIFGKGNVTKSAEF 182
Query: 609 NAHMDVEAYHVVTE 650
N MD EA H+ E
Sbjct: 183 NFMMDPEAAHITLE 196
>AE014298-1941|AAG22352.1| 344|Drosophila melanogaster CG11158-PA
protein.
Length = 344
Score = 101 bits (242), Expect = 1e-21
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 14/194 (7%)
Frame = +3
Query: 111 RKFVIDNDAGGDDA--MAIFLAALFEKYHAGP--QLIGVTTSNGNTNEDNVSYNNQRILK 278
R V D D G DDA +A+ L A G +++ +TT +GNT+ DN + N R+L
Sbjct: 6 RLVVYDCDIGTDDAWGLAMLLRAEELTLREGRTCKVLAITTVHGNTDADNGTLNALRVLH 65
Query: 279 VAKRQDVPIYRGSKSSLV-KTPEITDYF-GKDGLGDSG-----DVYPDLVPPHTENAVNA 437
R+DVP++RG S+V +T E T+ F G+DGL D G DV +L P H AVNA
Sbjct: 66 TLNRRDVPVFRGCYESIVPRTWEYTNCFHGQDGLNDVGNYPVVDVEQELQPEH---AVNA 122
Query: 438 LIQLSKTHEGNLTIITIGALTNLALAIKT-DPAFLGRLAHVYIGAGHIHTEEYPT--AEF 608
+ +L++ + G + + G LTN A I +FL + VYI G+I + T AEF
Sbjct: 123 MYRLARANPGQVDFLLCGPLTNFANCINLYGNSFLTNIGRVYIMGGNIFGKGNVTKSAEF 182
Query: 609 NAHMDVEAYHVVTE 650
N MD EA H+ E
Sbjct: 183 NFMMDPEAAHITLE 196
>BT021941-1|AAX51646.1| 362|Drosophila melanogaster RE18811p
protein.
Length = 362
Score = 97.5 bits (232), Expect = 2e-20
Identities = 72/201 (35%), Positives = 100/201 (49%), Gaps = 9/201 (4%)
Frame = +3
Query: 111 RKFVIDNDAGGDDAMAIFLAALFEKYHAGPQLIGVTTSN-GNTNEDNVSYNNQRILKVAK 287
R ++D D G DDA A+ L K H G L+ +TT GNT+ +N + N +RIL K
Sbjct: 25 RYAILDCDGGSDDAWALLLLLHAAKSH-GIHLLAITTMGCGNTSRENAARNMRRILDACK 83
Query: 288 RQDVPIYRGSKSSLVKTPE-ITDYF-GKDGLGD--SGDVYPDLVP-PHTENAVNALIQLS 452
R D+PIY G+ +L+ + E YF G+DG GD + D L E+AV A+ L
Sbjct: 84 RTDIPIYLGAVDALIPSLEDEKKYFHGRDGFGDCLTDDCALQLEDIVQAEHAVTAIHDLC 143
Query: 453 KTHEGNLTIITIGALTNLALAIKT-DPAFLGRLAHVYIGAGHIH--TEEYPTAEFNAHMD 623
++ +TI +G LTNLAL P F ++I G+ +AEFN H D
Sbjct: 144 RSRPKQITIFAVGPLTNLALGYTMYGPEFGNNFRDLFIMGGNYQGVGNSSRSAEFNFHSD 203
Query: 624 VEAYHVVTENANPEKVTIFPF 686
EA H V +TI P+
Sbjct: 204 PEAAHTVLLRTRC-PITILPW 223
>AE014298-1940|AAF48302.1| 362|Drosophila melanogaster CG12177-PA
protein.
Length = 362
Score = 97.5 bits (232), Expect = 2e-20
Identities = 72/201 (35%), Positives = 100/201 (49%), Gaps = 9/201 (4%)
Frame = +3
Query: 111 RKFVIDNDAGGDDAMAIFLAALFEKYHAGPQLIGVTTSN-GNTNEDNVSYNNQRILKVAK 287
R ++D D G DDA A+ L K H G L+ +TT GNT+ +N + N +RIL K
Sbjct: 25 RYAILDCDGGSDDAWALLLLLHAAKSH-GIHLLAITTMGCGNTSRENAARNMRRILDACK 83
Query: 288 RQDVPIYRGSKSSLVKTPE-ITDYF-GKDGLGD--SGDVYPDLVP-PHTENAVNALIQLS 452
R D+PIY G+ +L+ + E YF G+DG GD + D L E+AV A+ L
Sbjct: 84 RTDIPIYLGAVDALIPSLEDEKKYFHGRDGFGDCLTDDCALQLEDIVQAEHAVTAIHDLC 143
Query: 453 KTHEGNLTIITIGALTNLALAIKT-DPAFLGRLAHVYIGAGHIH--TEEYPTAEFNAHMD 623
++ +TI +G LTNLAL P F ++I G+ +AEFN H D
Sbjct: 144 RSRPKQITIFAVGPLTNLALGYTMYGPEFGNNFRDLFIMGGNYQGVGNSSRSAEFNFHSD 203
Query: 624 VEAYHVVTENANPEKVTIFPF 686
EA H V +TI P+
Sbjct: 204 PEAAHTVLLRTRC-PITILPW 223
>AE014134-2209|AAF53198.1| 355|Drosophila melanogaster CG5418-PA
protein.
Length = 355
Score = 87.4 bits (207), Expect = 2e-17
Identities = 65/195 (33%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Frame = +3
Query: 105 IKRKFVIDNDAGGDDAMAIFLAALFEKYHAGP----QLIGVTTSNGNTNEDNVSYNNQRI 272
++R V D D G DDA A+ L E+ +LI +T GNT+ N + N +I
Sbjct: 8 LERLVVFDCDIGTDDAWALALLLRGEQLSLASGRRYKLIAITCVQGNTDVVNGAQNALKI 67
Query: 273 LKVAKRQDVPIYRGSKSSLVKTP--EITDYFGKDGLGDSGDVYPDL----VPPHTENAVN 434
L++ +R+DVP++RG + +V +I+ + G DGL D G YPD+ E+AVN
Sbjct: 68 LRLLERRDVPVFRGCANPIVTRTWLDISRFHGTDGLNDIGG-YPDVSDLQEQLQQEHAVN 126
Query: 435 ALIQLSKTHEGNLTIITIGALTNLALAIKT-DPAFLGRLAHVYIGAGHIHTEE--YPTAE 605
A+ +L + + + G LTN A I FL ++ ++I G+I+ AE
Sbjct: 127 AMYRLVCQYPKQVDFLLCGPLTNFASCINLYGDDFLDKIGGIFIMGGNIYGRGNIMKCAE 186
Query: 606 FNAHMDVEAYHVVTE 650
FN MD EA H E
Sbjct: 187 FNFMMDPEAAHTTLE 201
>AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1
protein.
Length = 1795
Score = 37.1 bits (82), Expect = 0.024
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +1
Query: 352 TTSVKTASETVGMS--TQIWYRRIQKMPSTLLYNCLRHMKATLPSSL*AR*PT*LWPLKR 525
TT+ K ++ T S T+ R P T T PS+ P+ P
Sbjct: 539 TTTQKRSTTTHNTSPDTKTTIRSTTLSPKTTTTPSTTTPSTTTPSTTT---PSTTTPSTT 595
Query: 526 TPPFSADSHTSTSEPDTYIPKNTRQQSSTLTWMLKRTTS*PKT 654
TP + S T+T + T+ P+ T Q+++T + K+TT+ PKT
Sbjct: 596 TPSTTTPSTTTTVKVSTHRPRTTSQKTTTASTTTKKTTTSPKT 638
>AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA
protein.
Length = 1795
Score = 37.1 bits (82), Expect = 0.024
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +1
Query: 352 TTSVKTASETVGMS--TQIWYRRIQKMPSTLLYNCLRHMKATLPSSL*AR*PT*LWPLKR 525
TT+ K ++ T S T+ R P T T PS+ P+ P
Sbjct: 539 TTTQKRSTTTHNTSPDTKTTIRSTTLSPKTTTTPSTTTPSTTTPSTTT---PSTTTPSTT 595
Query: 526 TPPFSADSHTSTSEPDTYIPKNTRQQSSTLTWMLKRTTS*PKT 654
TP + S T+T + T+ P+ T Q+++T + K+TT+ PKT
Sbjct: 596 TPSTTTPSTTTTVKVSTHRPRTTSQKTTTASTTTKKTTTSPKT 638
>BT003447-1|AAO39450.1| 647|Drosophila melanogaster RH57538p
protein.
Length = 647
Score = 31.1 bits (67), Expect = 1.6
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 216 TTSNGNTNEDNVSYNNQRILKVAKRQDVPIY-RGSKSSLVKTPEITDYFGKDGLGDSG 386
T+ N N + N VA D ++ G +SSL +ITD+ GK DSG
Sbjct: 365 TSMETNPIAMNTVFKNTIFTNVASTSDGGVFWEGMESSLAPNVQITDWLGKPWTKDSG 422
>AE013599-2716|AAM68462.1| 500|Drosophila melanogaster CG17725-PB,
isoform B protein.
Length = 500
Score = 31.1 bits (67), Expect = 1.6
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 216 TTSNGNTNEDNVSYNNQRILKVAKRQDVPIY-RGSKSSLVKTPEITDYFGKDGLGDSG 386
T+ N N + N VA D ++ G +SSL +ITD+ GK DSG
Sbjct: 218 TSMETNPIAMNTVFKNTIFTNVASTSDGGVFWEGMESSLAPNVQITDWLGKPWTKDSG 275
>AE013599-2715|AAF57676.1| 647|Drosophila melanogaster CG17725-PA,
isoform A protein.
Length = 647
Score = 31.1 bits (67), Expect = 1.6
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 216 TTSNGNTNEDNVSYNNQRILKVAKRQDVPIY-RGSKSSLVKTPEITDYFGKDGLGDSG 386
T+ N N + N VA D ++ G +SSL +ITD+ GK DSG
Sbjct: 365 TSMETNPIAMNTVFKNTIFTNVASTSDGGVFWEGMESSLAPNVQITDWLGKPWTKDSG 422
>Y00402-1|CAA68463.1| 647|Drosophila melanogaster protein (
Drosophila melanogastermRNA for phosphoenolpyruvate
carboxykinase (GTP) (PEPCK,EC 4.1.1.32). ).
Length = 647
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 216 TTSNGNTNEDNVSYNNQRILKVAKRQDVPIY-RGSKSSLVKTPEITDYFGKDGLGDSG 386
T+ N N + N VA D ++ G +SSL ITD+ GK DSG
Sbjct: 365 TSMETNPIAMNTVFKNTIFTNVASTSDGGVFWEGMESSLAPNVRITDWLGKPWTKDSG 422
>AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-PA
protein.
Length = 1317
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 364 KTASETVGMSTQIWYRRIQKMPSTLLYNCLR 456
K S+T+ +S IW R P + LY C R
Sbjct: 498 KPVSKTLSISNSIWERFCDNKPKSTLYKCAR 528
>AY069289-1|AAL39434.1| 1137|Drosophila melanogaster GM14421p
protein.
Length = 1137
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +3
Query: 105 IKRKFVIDNDAGGDDAMAIFLAALFEKYHAGPQLIGVTTSNGNTNEDNVS 254
+KRKFV N A D + +L + KY PQL T G NE N+S
Sbjct: 641 LKRKFVSLNMAESCDDLK-YLQIDYAKYRDRPQLDYGTIEEGYENETNLS 689
>AE014298-2419|AAF48620.1| 1137|Drosophila melanogaster CG9902-PA
protein.
Length = 1137
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +3
Query: 105 IKRKFVIDNDAGGDDAMAIFLAALFEKYHAGPQLIGVTTSNGNTNEDNVS 254
+KRKFV N A D + +L + KY PQL T G NE N+S
Sbjct: 641 LKRKFVSLNMAESCDDLK-YLQIDYAKYRDRPQLDYGTIEEGYENETNLS 689
>AY135130-2|AAN17634.1| 945|Drosophila melanogaster corkscrew
phosphatase splice variantB protein.
Length = 945
Score = 28.7 bits (61), Expect = 8.4
Identities = 25/90 (27%), Positives = 38/90 (42%)
Frame = +3
Query: 213 VTTSNGNTNEDNVSYNNQRILKVAKRQDVPIYRGSKSSLVKTPEITDYFGKDGLGDSGDV 392
+ +N NT ++N +YNNQR + + + + GSK + E + F K G V
Sbjct: 33 INNNNNNTLKNNNAYNNQRNFEYERA--IQAHYGSKGRRSEERERSGKF-KASKGRKAKV 89
Query: 393 YPDLVPPHTENAVNALIQLSKTHEGNLTII 482
P P T A + TH+ II
Sbjct: 90 IP---PTETPEAQEPACKNCMTHDELAQII 116
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,440,146
Number of Sequences: 53049
Number of extensions: 674387
Number of successful extensions: 2350
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2330
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -