Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2k02
         (809 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M59941-1|AAA18171.1|  897|Homo sapiens GM-CSF receptor beta chai...    31   6.5  
CR456428-1|CAG30314.1|  903|Homo sapiens CSF2RB protein.               31   6.5  
BC070085-1|AAH70085.1|  889|Homo sapiens CSF2RB protein protein.       31   6.5  
AL133392-1|CAI23586.1|  897|Homo sapiens colony stimulating fact...    31   6.5  
AL008637-2|CAI17999.1|  897|Homo sapiens colony stimulating fact...    31   6.5  

>M59941-1|AAA18171.1|  897|Homo sapiens GM-CSF receptor beta chain
           protein.
          Length = 897

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 540 WKCMFVSIYTLLIILLALRFCVIYIFKFSR 451
           W    + I+  + +LLALRFC IY ++  R
Sbjct: 443 WVLALIVIFLTIAVLLALRFCGIYGYRLRR 472


>CR456428-1|CAG30314.1|  903|Homo sapiens CSF2RB protein.
          Length = 903

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 540 WKCMFVSIYTLLIILLALRFCVIYIFKFSR 451
           W    + I+  + +LLALRFC IY ++  R
Sbjct: 449 WVLALIVIFLTIAVLLALRFCGIYGYRLRR 478


>BC070085-1|AAH70085.1|  889|Homo sapiens CSF2RB protein protein.
          Length = 889

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 540 WKCMFVSIYTLLIILLALRFCVIYIFKFSR 451
           W    + I+  + +LLALRFC IY ++  R
Sbjct: 443 WVLALIVIFLTIAVLLALRFCGIYGYRLRR 472


>AL133392-1|CAI23586.1|  897|Homo sapiens colony stimulating factor
           2 receptor, beta, low-affinity (granulocyte-macrophag
           protein.
          Length = 897

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 540 WKCMFVSIYTLLIILLALRFCVIYIFKFSR 451
           W    + I+  + +LLALRFC IY ++  R
Sbjct: 443 WVLALIVIFLTIAVLLALRFCGIYGYRLRR 472


>AL008637-2|CAI17999.1|  897|Homo sapiens colony stimulating factor
           2 receptor, beta, low-affinity (granulocyte-macrophag
           protein.
          Length = 897

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 540 WKCMFVSIYTLLIILLALRFCVIYIFKFSR 451
           W    + I+  + +LLALRFC IY ++  R
Sbjct: 443 WVLALIVIFLTIAVLLALRFCGIYGYRLRR 472


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,245,673
Number of Sequences: 237096
Number of extensions: 1938787
Number of successful extensions: 3236
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3236
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)