Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2j22
(725 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0109 - 26526691-26526775,26526894-26527019,26527228-265273... 258 3e-69
05_07_0194 + 28327328-28327376,28327699-28327742,28327852-283279... 255 3e-68
01_01_1031 + 8169505-8169553,8169831-8169905,8170395-8170438,817... 230 1e-60
04_04_0457 + 25359486-25359571,25360690-25360782,25361561-253616... 116 1e-33
02_05_0979 + 33268294-33269595 31 1.2
02_05_0597 + 30245455-30245767,30246693-30246760,30246851-302469... 29 2.8
12_02_0316 + 17432346-17432520,17432604-17433211 29 3.8
11_06_0291 + 22008412-22012284 29 3.8
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 29 5.0
08_02_0103 - 12400494-12400626,12400882-12400958 29 5.0
03_05_0786 + 27691451-27691688,27692376-27692479,27692600-276926... 29 5.0
11_06_0286 + 21945699-21946213,21946255-21947542 28 6.6
07_03_1062 + 23668334-23669644,23670676-23670764,23671494-23671584 28 6.6
05_01_0111 - 752045-752641 28 8.7
>01_06_0109 -
26526691-26526775,26526894-26527019,26527228-26527370,
26527521-26527555,26527676-26527791,26527868-26527936,
26528070-26528173,26528253-26528338,26528429-26528530,
26528609-26528662,26528763-26528840,26528936-26528973,
26529235-26529344,26529463-26529506,26530232-26530280
Length = 412
Score = 258 bits (632), Expect = 3e-69
Identities = 126/206 (61%), Positives = 155/206 (75%), Gaps = 2/206 (0%)
Frame = +1
Query: 109 KIK-AGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAE 285
KIK A P+V++ GDEMTRI W IK+KLI PFLD+++ YDLG+ +RD TDD+VT++ AE
Sbjct: 5 KIKVANPIVEMDGDEMTRIFWQSIKDKLIFPFLDLDIKYYDLGVLHRDATDDKVTVEAAE 64
Query: 286 AIKKYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVT 465
A KYNV IKCATITPDE RV+EF LK+MWKSPNGTIRNI+ GTVFRE IICKN+PRLV
Sbjct: 65 ATLKYNVAIKCATITPDEARVKEFNLKQMWKSPNGTIRNIINGTVFREPIICKNVPRLVP 124
Query: 466 GWDKPIIIGRHAHADQYKATDFVVPGAGTLEIIFKPESGEAIKHVVHEYKGA-GVALAMF 642
GW KPI IGRHA DQY+ATD V+ G G L+++F+ + E I V + GA GVAL+M+
Sbjct: 125 GWTKPICIGRHAFGDQYRATDAVLKGPGKLKLVFEGKD-EQIDLEVFNFTGAGGVALSMY 183
Query: 643 NTDASIIDFAHSSFKVXFGQKIPSVL 720
NTD SI FA +S + +K P L
Sbjct: 184 NTDESIRAFAEASMTTAYEKKWPLYL 209
>05_07_0194 +
28327328-28327376,28327699-28327742,28327852-28327961,
28328250-28328287,28328371-28328448,28328527-28328580,
28328663-28328764,28329152-28329237,28329327-28329430,
28329542-28329610,28329689-28329804,28329949-28329983,
28330152-28330294,28330473-28330598,28330700-28330784
Length = 412
Score = 255 bits (624), Expect = 3e-68
Identities = 123/207 (59%), Positives = 155/207 (74%), Gaps = 2/207 (0%)
Frame = +1
Query: 106 SKIK-AGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCA 282
+KIK A P+V++ GDEMTR+ W IK+KLI PFL++++ +DLG+ RD+TDD+VT++ A
Sbjct: 4 TKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPYRDQTDDKVTVEAA 63
Query: 283 EAIKKYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLV 462
EA KYNV IKCATITPDE RV+EF LK MWKSPNGTIRNIL GTVFRE IICKNIPRLV
Sbjct: 64 EATLKYNVAIKCATITPDEARVKEFSLKSMWKSPNGTIRNILNGTVFREPIICKNIPRLV 123
Query: 463 TGWDKPIIIGRHAHADQYKATDFVVPGAGTLEIIFKPESGEAIKHVVHEYKGA-GVALAM 639
GW KPI IGRHA DQY+ATD V+ G G L+++++ + E I+ V + GA GVA +M
Sbjct: 124 PGWTKPICIGRHAFGDQYRATDAVIKGPGKLKLVYEGKD-EEIELEVFNFTGAGGVAQSM 182
Query: 640 FNTDASIIDFAHSSFKVXFGQKIPSVL 720
+NTD SI FA +S + +K P L
Sbjct: 183 YNTDESIRSFAEASMATAYEKKWPLYL 209
>01_01_1031 +
8169505-8169553,8169831-8169905,8170395-8170438,
8170633-8170742,8170960-8170997,8171055-8171186,
8171298-8171351,8171424-8171525,8172679-8172764,
8172870-8172973,8173056-8173124,8173156-8173209,
8173210-8173325,8173420-8173454,8173637-8173779,
8174105-8174227,8174305-8174398
Length = 475
Score = 230 bits (562), Expect = 1e-60
Identities = 121/212 (57%), Positives = 144/212 (67%), Gaps = 19/212 (8%)
Frame = +1
Query: 142 GDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCA 321
GDEMTR+IW IK+KLI PFLD+++ YDLG+ NRD T D+VTI+ AEA KYNV IKCA
Sbjct: 42 GDEMTRVIWKWIKDKLIFPFLDLDIKYYDLGLPNRDATGDKVTIESAEATLKYNVAIKCA 101
Query: 322 TITP------------------DEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKN 447
TITP DE RV+EF L MWKSPNGTIRNIL GTVFRE IICKN
Sbjct: 102 TITPVLDTQFKFDFGRTIHEPTDEGRVKEFNLSAMWKSPNGTIRNILNGTVFREPIICKN 161
Query: 448 IPRLVTGWDKPIIIGRHAHADQYKATDFVVPGAGTLEIIFKPESGEAIKHVVHEYKGA-G 624
IPRLV GW KPI IGRHA DQY+ATD V+ G G L+++F E I+ V + GA G
Sbjct: 162 IPRLVPGWIKPICIGRHAFGDQYRATDTVIKGPGKLKLVFDGRE-EQIELDVFNFTGAGG 220
Query: 625 VALAMFNTDASIIDFAHSSFKVXFGQKIPSVL 720
VAL+M+NTD SI FA +S + + ++ P L
Sbjct: 221 VALSMYNTDESIWAFAEASMNMAYQKRWPLYL 252
>04_04_0457 +
25359486-25359571,25360690-25360782,25361561-25361622,
25361758-25361816,25363624-25363733,25364795-25364829,
25365469-25365546,25365952-25366005,25366277-25366362,
25366468-25366571,25366986-25367054,25367135-25367250,
25367387-25367421,25367512-25367654,25367808-25367930,
25368463-25368556
Length = 448
Score = 116 bits (279), Expect(2) = 1e-33
Identities = 53/95 (55%), Positives = 72/95 (75%)
Frame = +1
Query: 181 EKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFK 360
+ LI P+L++++ +DLG+ NRD TDD+VT++ AEA T+T DE RV+EFK
Sbjct: 99 DDLIFPYLELDVKYFDLGLLNRDATDDKVTVESAEATLDLYSNSFFMTLT-DETRVKEFK 157
Query: 361 LKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVT 465
LK MW+SPNGTIRNIL GTVFRE I+CKN+PR+++
Sbjct: 158 LKSMWRSPNGTIRNILNGTVFREPILCKNVPRILS 192
Score = 44.8 bits (101), Expect(2) = 1e-33
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +1
Query: 559 IIFKPESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKVXFGQKIPSVL 720
I+ P+ E ++ V+ +KG GVAL+M+N D SI FA SS + +K P L
Sbjct: 190 ILSVPDGAEPVELNVYNFKGPGVALSMYNVDESIRAFAESSMAMALSKKWPLYL 243
>02_05_0979 + 33268294-33269595
Length = 433
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 538 PGAGTLEIIFKPESGEAIKHVVHEYKGAGVA-LAMFNTDASIIDFAHSSFKVXFGQ 702
P GTLEIIF PE EA+ H+Y V+ L +F +++ ++S + F Q
Sbjct: 381 PSVGTLEIIFSPED-EAVGE-YHDYSNNEVSTLGLFEESLALV--GNTSENIVFSQ 432
>02_05_0597 +
30245455-30245767,30246693-30246760,30246851-30246939,
30247047-30247212,30247296-30247585,30247692-30247896,
30248013-30248170,30248352-30248595
Length = 510
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -1
Query: 476 LSHPVTSLGIFLQIIASLKTVPPRILRMVPLGLFH 372
+ H +TSL ++I L+ +PPR+ R V LG+FH
Sbjct: 165 VEHFITSLRDEVRI---LRELPPRVKRRVELGMFH 196
>12_02_0316 + 17432346-17432520,17432604-17433211
Length = 260
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 463 TGWDKPIIIGRHAHADQYKATDFVVPGAGTLEIIF-KPESGEAIKHVVHEYKGAGVALA 636
TG +KP+ + A A + +A VV +L KP +G+ V+HEY+ AG LA
Sbjct: 93 TGKEKPVAVSVAA-APRSQAAAVVVGMKRSLVFYRGKPPTGKKTDWVMHEYRLAGAGLA 150
>11_06_0291 + 22008412-22012284
Length = 1290
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = -3
Query: 657 RCISVKHSQCYTCTLVLMNYMFYCLTRFRFEDYFKSTSTWDNKVSC 520
+C+ ++H C L+ F CL E + + T++N+ +C
Sbjct: 1190 QCVRLRHISCTESMLIFKKDDFKCLKYLLIEGFNLTNITFENRSAC 1235
>10_06_0105 -
10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +1
Query: 358 KLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDK 477
K++ W+ P I VFR NIP TGWDK
Sbjct: 69 KMEAFWRVPKWKIEKAKVKVVFRLQFHATNIPS--TGWDK 106
>08_02_0103 - 12400494-12400626,12400882-12400958
Length = 69
Score = 28.7 bits (61), Expect = 5.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 157 WSFHHQGCQQQVQP 116
WS HHQGCQ + P
Sbjct: 12 WSLHHQGCQPRALP 25
>03_05_0786 +
27691451-27691688,27692376-27692479,27692600-27692671,
27693231-27693404,27693603-27693726,27695154-27695200,
27695381-27695593
Length = 323
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 714 RGYFLSKANFE*RMSKVNNRCISVKHSQCYTCTLVLMNY 598
+GY L++ F+ + + NRCI K + Y C L + Y
Sbjct: 237 KGYGLNRYGFDFKPEMMVNRCIIEKVALVYECDLCVEKY 275
>11_06_0286 + 21945699-21946213,21946255-21947542
Length = 600
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 657 RCISVKHSQCYTCTLVLMNYMFYCLTRFRFEDYFKSTSTWDNKVSC----FVLISMSMTS 490
+C+ ++H C L+ F CL E + + T+++ +C VL S S+ S
Sbjct: 500 QCVRLQHISCIVSELIFKEENFKCLKYLLIEGFNLTNITFEDGSACELEKMVLSSTSIES 559
Query: 489 NDDGFVPPCYKSRYILANNS 430
V P +K + NNS
Sbjct: 560 VSGVDVLPKFKE--LELNNS 577
>07_03_1062 + 23668334-23669644,23670676-23670764,23671494-23671584
Length = 496
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +1
Query: 562 IFKPESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKVXFGQKIPSVL 720
+ +P+S HV Y AG M N S+IDF S G P+ +
Sbjct: 38 LLQPDSCPGSPHVAAAYDAAGADSDMENLTDSVIDFHLSELAATAGPAHPAAV 90
>05_01_0111 - 752045-752641
Length = 198
Score = 27.9 bits (59), Expect = 8.7
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = +1
Query: 394 IRNILGGTVFREAIICKNIPRLVTGWDKPIIIGRHAHADQYKATDFVVPGAGTLEIIFKP 573
I LGG + R + +PR + KP ++ H H + + G L++ P
Sbjct: 103 IGQALGGHMRRHRAMTGGMPRAIVVDKKPDVVDVHVHG--HDDDGGIKRGGLWLDLNHPP 160
Query: 574 --ESGEAIKHVVHEYKGAGVALAMF-NTDASIID 666
++G+ H GAG+ F +T A +D
Sbjct: 161 CDDAGDDDAECGHNAAGAGITFHQFLDTGAMAVD 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,943,952
Number of Sequences: 37544
Number of extensions: 401066
Number of successful extensions: 953
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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