Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2j22
         (725 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          25   2.4  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    25   2.4  
AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding pr...    25   3.2  
AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding pr...    25   3.2  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.2  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   9.6  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         23   9.6  

>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 556 QEYQHLGQQSQLLCIDQHEHDVQ**WV-CPTLLQVS 452
           +E + +   ++++C+DQH   +   W+ C TL  +S
Sbjct: 293 EEMRKVRLAARVVCVDQHRPSIPSRWIACDTLHAIS 328


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 487 IGRHAHADQYKATDFVVPGAGTLEIIFKPESGEAIKHVVH 606
           +GR  +AD+Y A D+ +  AG   ++   E    +KH+VH
Sbjct: 500 LGRPTYADRYDANDYHL-HAGRNAMV--KEFAAKLKHLVH 536


>AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding
           protein AgamOBP4 protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -1

Query: 212 SMSKKGRISFSLIRSQIILVISSPRMST 129
           +M+KKG ISFS   +QI  ++  P M T
Sbjct: 83  TMTKKGEISFSKTMAQIEAML-PPEMKT 109


>AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding
           protein protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -1

Query: 212 SMSKKGRISFSLIRSQIILVISSPRMST 129
           +M+KKG ISFS   +QI  ++  P M T
Sbjct: 83  TMTKKGEISFSKTMAQIEAML-PPEMKT 109


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 534  NKVSCFVLISMSMTSNDDGFV 472
            ++V+C  L+SM+M  N DG V
Sbjct: 1485 HRVACKRLVSMNMPLNSDGTV 1505


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +1

Query: 112 IKAG-PVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEA 288
           + AG P   ILG  +  I++D + +  + P +++  +  DL +     T D+V     EA
Sbjct: 682 VTAGVPQGSILGPTLWNIMYDGVLDVPLPPDVEVIGYADDLALLVPATTTDEVRARAEEA 741

Query: 289 I 291
           +
Sbjct: 742 V 742


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = -2

Query: 382 GFSTFSSV*ILQLSSHQELWSHI*CPHCISLWPQHNQL*LDHQSYHDFPYPSRRHV 215
           G S  + +  +QL+   E W  I     ++LW ++ Q   +H  Y    +  RR V
Sbjct: 209 GESEMTEISSMQLTGDYEGWLEINVTGAVNLWLKNRQ--ANHGLYIGAYFGERREV 262


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,270
Number of Sequences: 2352
Number of extensions: 15185
Number of successful extensions: 41
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)