Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2j22
         (725 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical pr...   309   1e-84
Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical pr...   267   5e-72
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical pr...    29   4.5  
X75331-1|CAA53080.1|  620|Caenorhabditis elegans acetylcholinest...    29   4.5  
U58731-1|AAB00593.1|  620|Caenorhabditis elegans Abnormal acetyl...    29   4.5  
U40417-9|AAA81417.2|  120|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF043704-3|AAK21473.2|  823|Caenorhabditis elegans Sulfate perme...    28   5.9  

>Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical
           protein F59B8.2 protein.
          Length = 412

 Score =  309 bits (759), Expect = 1e-84
 Identities = 145/205 (70%), Positives = 167/205 (81%), Gaps = 1/205 (0%)
 Frame = +1

Query: 109 KIKAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEA 288
           KI+ G +V++ GDEMTRIIWDLIKEKLILP++D+ +H +DLG+E+RD TDDQVTID A A
Sbjct: 5   KIQGGDIVEMQGDEMTRIIWDLIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDAANA 64

Query: 289 IKKYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTG 468
             KYNV +KCATITPDE RVEEFKLKKMWKSPNGTIRNILGGTVFRE II KN+PRLV  
Sbjct: 65  TLKYNVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIIVKNVPRLVNT 124

Query: 469 WDKPIIIGRHAHADQYKATDFVVPGAGTLEIIFKPESG-EAIKHVVHEYKGAGVALAMFN 645
           W KPIIIGRHAHADQYKATDFVVPGAG LEI F    G + I+  V ++KG GV+L+M+N
Sbjct: 125 WSKPIIIGRHAHADQYKATDFVVPGAGKLEIKFVSADGTQTIQETVFDFKGPGVSLSMYN 184

Query: 646 TDASIIDFAHSSFKVXFGQKIPSVL 720
           TD SI DFAH+SFK    +K P  L
Sbjct: 185 TDDSIRDFAHASFKYALQRKFPLYL 209


>Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical
           protein C34F6.8 protein.
          Length = 435

 Score =  267 bits (655), Expect = 5e-72
 Identities = 128/206 (62%), Positives = 154/206 (74%), Gaps = 2/206 (0%)
 Frame = +1

Query: 109 KIKA-GPVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAE 285
           KIK   PVVD+ GDEMTRIIW  IK KLILP+LD+++  YDLG+E RD+T+DQVTID A 
Sbjct: 26  KIKVDNPVVDLDGDEMTRIIWKEIKNKLILPYLDLDIKYYDLGLEYRDETNDQVTIDAAH 85

Query: 286 AIKKYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVT 465
           AI +++VGIKCATITPDE R++EF LKKMW SPNGTIRNILGGTVFRE I+CKNIPRLV 
Sbjct: 86  AILEHSVGIKCATITPDEARIKEFNLKKMWLSPNGTIRNILGGTVFREPILCKNIPRLVP 145

Query: 466 GWDKPIIIGRHAHADQYKATDFVVPGAGTLEIIFKPESGEAIKHVVHEY-KGAGVALAMF 642
           GW +PI IGRHA  DQYK TD V+P   TL+++     G    H V+++ K  GV LAM+
Sbjct: 146 GWTQPITIGRHAFGDQYKCTDLVIPSGSTLQLLVNKPDGSKDVHNVYDFKKSGGVGLAMY 205

Query: 643 NTDASIIDFAHSSFKVXFGQKIPSVL 720
           NTD SI  FAHS F+    ++ P  L
Sbjct: 206 NTDESIKGFAHSCFQYALMKQWPLYL 231


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = +1

Query: 196  PFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKKMW 375
            P +D    V ++    R +   +  +      KK+    +  T+ PDE+ VE  KL K  
Sbjct: 2175 PDVDDSEDVEEIMRRPRKRIGPKEEVVLLSVTKKHPHSYRTKTV-PDEEPVEIVKLVKNR 2233

Query: 376  KSPNGTIRNI 405
            + PN T+R +
Sbjct: 2234 RLPNATLREV 2243


>Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical
           protein T26H8.4 protein.
          Length = 561

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = -3

Query: 354 FFNSLLIRSYGRTFDAHIVFLYGLSTINCNLIISLITIFH 235
           F+NSL I S   TF    +F+   STI+ + +I LI IFH
Sbjct: 59  FYNSLSISS---TFP--FIFMTEFSTISTSFLILLIAIFH 93


>X75331-1|CAA53080.1|  620|Caenorhabditis elegans
           acetylcholinesterase protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -2

Query: 292 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 182
           +WP++N + +++ +   +  YPS + +   PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560


>U58731-1|AAB00593.1|  620|Caenorhabditis elegans Abnormal
           acetylcholinesterase protein1 protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -2

Query: 292 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 182
           +WP++N + +++ +   +  YPS + +   PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560


>U40417-9|AAA81417.2|  120|Caenorhabditis elegans Hypothetical
           protein T08A9.13 protein.
          Length = 120

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = +1

Query: 235 MENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKK 369
           ++   + + +  ++C +A+ +Y+V  K  T+T  E++  E   KK
Sbjct: 44  LQKAKELEQRTRVECQQALDQYDVLKKIPTLTEQERKENETLTKK 88


>AF043704-3|AAK21473.2|  823|Caenorhabditis elegans Sulfate permease
           family protein 6 protein.
          Length = 823

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +1

Query: 505 ADQYKATDFVVPGAGTLEIIFKPESGE-AIKHVVHEYKGAGVALAMFNTDASI 660
           ADQY+    ++    T  II+    G+ A+K V ++YK  G+++   NT+  +
Sbjct: 650 ADQYERLTHIIIDCST--IIYVDLMGQGALKDVYNDYKTIGISVLFANTNEHV 700


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,525,896
Number of Sequences: 27780
Number of extensions: 363583
Number of successful extensions: 977
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)