Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2j21
(790 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0398 + 3142934-3143110,3143697-3143930,3144180-3144353,314... 169 3e-42
03_02_0694 - 10448712-10448996,10449030-10449074,10449588-104496... 100 1e-21
08_01_0925 + 9117217-9117576,9117674-9117749,9118460-9118592,911... 43 2e-04
03_02_0865 - 11895257-11895340,11896004-11896069,11896297-118963... 43 3e-04
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 40 0.002
07_03_1586 - 27929947-27930056,27930143-27930286,27930377-279307... 35 0.085
09_06_0027 + 20318187-20318301,20318428-20318489,20318583-203186... 34 0.15
03_06_0418 + 33785482-33785870,33786098-33786173,33786985-337870... 34 0.15
09_02_0322 - 7240125-7241568,7242043-7243253,7245782-7246144,724... 33 0.20
03_06_0523 + 34499533-34499705,34499808-34499917,34500037-345002... 33 0.26
09_06_0028 + 20328599-20328821,20330659-20330735,20330806-203309... 33 0.34
09_06_0188 - 21441377-21442201 32 0.45
05_07_0125 + 27861368-27862282 32 0.60
01_05_0726 - 24630080-24630778,24630899-24631011,24631088-246311... 31 0.79
10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991,430... 31 1.0
08_02_0783 - 21166491-21166892,21167139-21167251,21168127-211682... 31 1.0
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549... 31 1.0
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 30 1.8
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 30 2.4
04_04_0979 - 29862280-29862444,29862718-29862999,29863831-298639... 30 2.4
10_05_0104 + 9190779-9191847,9192544-9193332,9193652-9194049 29 3.2
05_01_0166 + 1145829-1145971,1146211-1146235,1147330-1147425,114... 29 4.2
04_01_0107 - 1107976-1108033,1108411-1108638,1110109-1110422,111... 29 4.2
02_05_0544 + 29876337-29876524,29876850-29876882,29878390-298785... 29 4.2
01_06_0188 - 27310814-27311138,27311197-27311547,27311682-273116... 29 5.6
04_03_0876 + 20493213-20493339,20493574-20493642,20493745-20493890 28 7.4
01_04_0103 + 16046012-16046018,16046214-16046366,16046908-160471... 28 7.4
12_01_0234 + 1755704-1756120,1756203-1756313,1756923-1757063,175... 28 9.7
02_05_0627 + 30463452-30463774,30463841-30463956,30464125-304643... 28 9.7
>05_01_0398 + 3142934-3143110,3143697-3143930,3144180-3144353,
3144450-3144554,3145274-3145351,3146019-3146100,
3146519-3146681,3147100-3147435,3147511-3147641,
3147687-3147729,3147826-3148444,3148523-3148588,
3149103-3149265,3149557-3149635,3150232-3150431,
3150972-3151144,3151466-3151559,3152353-3152444,
3153146-3153436
Length = 1099
Score = 169 bits (410), Expect = 3e-42
Identities = 98/214 (45%), Positives = 126/214 (58%), Gaps = 16/214 (7%)
Frame = +3
Query: 189 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV 368
PN TIY SL A+FSQFG+ILD++A KTLK +GQA+V+F++++SAT
Sbjct: 867 PNVTIYINNLNEKIKLEELKKSLRAVFSQFGKILDVLAFKTLKHKGQAWVVFEDVASATE 926
Query: 369 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXXXXSR 548
AL+SMQ FPF++KPMRIQY+K SDIIAK+ GTF R +R
Sbjct: 927 ALKSMQDFPFHNKPMRIQYAKTKSDIIAKADGTFVPRERRKRNDEKPEKKQKREQHHDVS 986
Query: 549 LIGHGI---------------PGAGILNNVNAE-QPPNQILFLTNLPDETSEMMLSMLFN 680
+G G+ P AG + E PN ILF+ NLP ET+ MML MLF
Sbjct: 987 QVGLGVNAYPGVYGAPPLSQLPFAGAQKVMMPEIIVPNNILFVQNLPHETTPMMLQMLFC 1046
Query: 681 QFPGFKEVRLVPNRHDIAFVEFGNEMQSAAAKKH 782
Q+PGFKEVR+V + IAFVE+G+E Q+ AA H
Sbjct: 1047 QYPGFKEVRMVEAKPGIAFVEYGDEGQATAAMNH 1080
>03_02_0694 -
10448712-10448996,10449030-10449074,10449588-10449647,
10449817-10449890,10451056-10451149,10451851-10452023,
10452526-10452598
Length = 267
Score = 100 bits (240), Expect = 1e-21
Identities = 49/103 (47%), Positives = 66/103 (64%)
Frame = +3
Query: 180 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 359
DI PN T+Y SLYA+ SQ+G+ILD+VA+KT K+RGQA+V+F EI++
Sbjct: 5 DIPPNQTVYLRNLNEKVKKEELKRSLYALCSQYGRILDVVALKTPKLRGQAWVVFSEITA 64
Query: 360 ATVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKR 488
AT A R +Q F FY K MR+QY+K SD +A G+ + KR
Sbjct: 65 ATNAFRGLQEFDFYGKRMRVQYAKTRSDCLATEDGSTAPKEKR 107
Score = 71.7 bits (168), Expect = 6e-13
Identities = 31/56 (55%), Positives = 42/56 (75%)
Frame = +3
Query: 606 PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNEMQSAAA 773
PPN ILF+ NLP ET+ MML +LF Q+PGF+EVR++ + IAFVE+ ++ QS A
Sbjct: 190 PPNNILFIQNLPAETTSMMLQILFQQYPGFREVRMIEAKPGIAFVEYEDDSQSMVA 245
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 324 GQAFVIFKEISSATVALRSMQGFPFYD-KPMRIQYSK 431
G AFV +++ S + VA++++QGF PM I Y+K
Sbjct: 230 GIAFVEYEDDSQSMVAMQALQGFKITPYNPMAISYAK 266
>08_01_0925 +
9117217-9117576,9117674-9117749,9118460-9118592,
9118684-9118795,9119121-9119180,9119425-9119516,
9119628-9119697,9119776-9119880
Length = 335
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Frame = +3
Query: 558 HGIPGAGILNNVNA-EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDI 731
+ + + NN N + PP LF+ NL + E L LF+ PG+K+++++ +R+ +
Sbjct: 236 YNFSSSSLKNNQNTKDNPPCNTLFIGNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTV 295
Query: 732 AFVEFGNEMQSAAAKKH 782
F+EF ++ +A+A H
Sbjct: 296 CFIEF-EDVNAASAVHH 311
>03_02_0865 -
11895257-11895340,11896004-11896069,11896297-11896355,
11896470-11896557,11897158-11897328,11897406-11897564,
11897653-11897835,11897931-11898012,11898753-11898959,
11899099-11899170,11901948-11902055,11902460-11902506
Length = 441
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +3
Query: 288 LDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 431
L I M+ +MRGQAFV F + A AL + GF F KPM IQ+ +
Sbjct: 386 LSIKLMQEGRMRGQAFVTFPSVELAQRALNLVHGFVFKGKPMIIQFGR 433
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +3
Query: 255 LYAIFSQFGQILDIVAMKTLKMR---GQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 425
LY +FSQ GQ++ + + + R G A+V F A AL + P KP+R+ Y
Sbjct: 55 LYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALELLNFAPLNGKPIRVMY 114
Query: 426 SKID 437
S D
Sbjct: 115 SNRD 118
>07_03_1586 -
27929947-27930056,27930143-27930286,27930377-27930704,
27931189-27931404,27932099-27932284,27932439-27932521,
27932621-27932752,27932943-27932999,27933352-27933412,
27933807-27933889,27933975-27934134
Length = 519
Score = 34.7 bits (76), Expect = 0.085
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +3
Query: 567 PGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV----PNRHDIA 734
P +G+ N AEQ LF+ LP + E +S LF+Q+ ++++++ R A
Sbjct: 112 PQSGVQGNAAAEQK----LFIGMLPRDVKENEVSALFSQYGNIRQLKVLRSPQKTRKACA 167
Query: 735 FVEFGNEMQSAAA 773
+EFG++ + AA
Sbjct: 168 ILEFGSKEHARAA 180
>09_06_0027 +
20318187-20318301,20318428-20318489,20318583-20318661,
20319096-20319168,20319860-20319939,20320283-20320404
Length = 176
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Frame = +3
Query: 597 AEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV--PNRHD-----IAFVEFGNE 755
A + ++ L++ LP ++ ++ +F F GF+EVRLV +RH + FV+F +
Sbjct: 15 ATRTESRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCNLLCFVDFSSP 74
Query: 756 MQSAAA 773
++ AA
Sbjct: 75 PEARAA 80
>03_06_0418 +
33785482-33785870,33786098-33786173,33786985-33787071,
33788096-33788143
Length = 199
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 255 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 425
+Y IF ++G I I RG AFV++++I A A+ + GF ++ + + Y
Sbjct: 35 MYDIFGKYGAIRQIRLGNAKDTRGTAFVVYEDIYDAKNAVDHLSGFNVANRYLIVLY 91
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 582 LNNVNAEQPP--NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL--VPNRHDIAFVEFG 749
L NA PP N++L++ NLP S + +F ++ +++RL + AFV +
Sbjct: 6 LRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTAFVVYE 65
Query: 750 NEMQSAAAKKH 782
+ + A H
Sbjct: 66 DIYDAKNAVDH 76
>09_02_0322 -
7240125-7241568,7242043-7243253,7245782-7246144,
7246502-7246522
Length = 1012
Score = 33.5 bits (73), Expect = 0.20
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +3
Query: 252 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 431
+L+ FS FG+++ I T R AFV + I++A A ++QG F + + I +S+
Sbjct: 193 TLWEAFSPFGEVVKIT---TFPGRTYAFVQYTTIAAACRAKETLQGNIFNNPRVSICFSR 249
Query: 432 IDSDIIAKSKGT 467
DS KG+
Sbjct: 250 SDSVSAEFGKGS 261
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 321 RGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKID 437
R AFV F A A+R +QG P+RI++SK D
Sbjct: 91 RSFAFVTFAREEDAVAAVRELQGIHLRGAPIRIEFSKGD 129
>03_06_0523 +
34499533-34499705,34499808-34499917,34500037-34500224,
34500984-34501451
Length = 312
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/60 (25%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +3
Query: 255 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 425
L A+F+Q+G+++D+ ++ T K +G AF+ +++ S +A+ ++ G + +R+ +
Sbjct: 52 LLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIVRVDH 111
>09_06_0028 +
20328599-20328821,20330659-20330735,20330806-20330968,
20331095-20331156,20331250-20331328,20331818-20331898,
20332068-20332216,20332254-20332319,20332495-20332643,
20332722-20332761,20333001-20333015
Length = 367
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = +3
Query: 588 NVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPN--RHD-----IAFVEF 746
N A ++ L++ LP ++ ++ +F F GF+EVRLV RH + FV+F
Sbjct: 128 NHGATITESRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKEIRHAGSCNLLCFVDF 187
Query: 747 GNEMQSAAA 773
+ ++ AA
Sbjct: 188 SSPPEARAA 196
>09_06_0188 - 21441377-21442201
Length = 274
Score = 32.3 bits (70), Expect = 0.45
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +3
Query: 255 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQG 389
L+ +FS+FG++ + +K + + RG AFV+F A A M G
Sbjct: 86 LHTLFSRFGRVARVTVLKDRDSRRSRGVAFVLFVRREDAAAAAAEMHG 133
>05_07_0125 + 27861368-27862282
Length = 304
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 255 LYAIFSQFGQILDIVAMKTLK--MRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 428
+Y S+FG++ + L M G +V F+E A A ++QG + +P+ ++YS
Sbjct: 85 IYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAHNALQGRFYSGRPIIVEYS 144
Query: 429 KI 434
+
Sbjct: 145 PV 146
>01_05_0726 -
24630080-24630778,24630899-24631011,24631088-24631169,
24631248-24631337,24631412-24631469,24631661-24631756,
24631835-24631908,24632006-24632068,24634111-24634320,
24634869-24635048
Length = 554
Score = 31.5 bits (68), Expect = 0.79
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 603 QPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL-VPNRHDIAFVEFGNEMQSAAAKK 779
QPP++++ L NLP + +E L L + F + V + AFVEF ++ Q+ A
Sbjct: 12 QPPSKVIHLRNLPWDCTEEELVELGSPFGKVVNTKCNVGANRNQAFVEFADQNQAIAMIS 71
Query: 780 HY 785
++
Sbjct: 72 YF 73
>10_02_0023 +
4306350-4306908,4308429-4308814,4308917-4308991,
4309330-4309539,4309649-4309961,4310035-4310130,
4310220-4310357,4310436-4310536,4310645-4310712,
4310800-4310849,4311790-4311848,4312399-4312530
Length = 728
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 621 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNEMQSAAAKKHYK 788
LF+ LP + E + ++F+Q + +R+V R IAFV + + + A +K
Sbjct: 256 LFVGGLPKDCVEEDIRVVFSQCGEVESIRIVKKRKRIAFVRYADISATKKALTEFK 311
>08_02_0783 -
21166491-21166892,21167139-21167251,21168127-21168208,
21168298-21168416,21168471-21168528,21168954-21169016,
21169641-21169850,21171549-21171731
Length = 409
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 255 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYD 404
L+ +FS FG + I AM QA + + +I++A VA ++++G YD
Sbjct: 209 LHTVFSAFGTVQKI-AMFEKNGGMQALIQYPDITTAAVAKQALEGHCIYD 257
>06_03_0614 -
22753092-22753349,22754059-22754277,22754712-22754960,
22755186-22755275,22755379-22755456,22755562-22756337,
22757042-22757384
Length = 670
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 252 SLYAIFSQFGQILD--IVAMKTLKMRGQAFVIFKEISSATVALRSMQG 389
SLY +FS FG IL + K +G F+ F+ SSA A+ + G
Sbjct: 164 SLYEMFSSFGTILSSKVATDFNGKSKGYGFIQFESESSAKDAINGLNG 211
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +3
Query: 255 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKI 434
L+ Q Q +V T +G FV F + SA VAL M G+P + ++ + +
Sbjct: 719 LFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGV 778
Query: 435 DSDIIAKSKGTF 470
D ++ F
Sbjct: 779 HPDAMSSYMAHF 790
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 261 AIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 431
A FS G LD V M R AFV+F+ + A AL ++QG +R+++++
Sbjct: 64 ASFSPHGA-LDCV-MARAGPRSYAFVLFRSVPEARAALDALQGSKVKGSVVRLEFAR 118
>04_04_0979 -
29862280-29862444,29862718-29862999,29863831-29863929,
29864037-29864366
Length = 291
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 264 IFSQFGQILDIVAMKTL--KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 431
+F+Q G + D+ +K K +G AFV A A+ + + +R+++SK
Sbjct: 99 LFAQCGAVKDVEVIKGKDGKKKGFAFVTMATAEEAAAAVEKLNSLDVMGRTIRVEFSK 156
>10_05_0104 + 9190779-9191847,9192544-9193332,9193652-9194049
Length = 751
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 585 NNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFG 749
NN+ + PN FLT+L + + + L + FN+ GF LV ++ ++ G
Sbjct: 278 NNILEAKTPNDRDFLTSLTNCSELVTLDLQFNRLSGFIPNTLVNLSQELIWIGLG 332
>05_01_0166 +
1145829-1145971,1146211-1146235,1147330-1147425,
1147544-1147645,1147767-1147889,1147996-1148622,
1148710-1148883,1148965-1149181,1149312-1149394,
1149478-1149573,1149676-1149724,1149850-1150088,
1150547-1150618,1150694-1150804,1150930-1151282,
1151377-1151464,1151691-1151789,1151860-1151991,
1152119-1152222,1153179-1153215,1153334-1153367,
1153451-1153467
Length = 1006
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 730 ISCLFGTRRTSLKPGN*LNNIDNIISEVSSGRF 632
+ C F T S KPG L+N D+++ E S+ F
Sbjct: 846 VHCKFFTFGDSFKPGGELSNFDDLLKERSATNF 878
>04_01_0107 -
1107976-1108033,1108411-1108638,1110109-1110422,
1110568-1110680,1111740-1111845
Length = 272
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 264 IFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPF 398
+F ++G+I D + MK+ G AFV F++ A+R++ G+PF
Sbjct: 21 LFYRYGRI-DRIDMKS----GFAFVYFEDERDGDEAIRALDGYPF 60
>02_05_0544 +
29876337-29876524,29876850-29876882,29878390-29878577,
29879755-29879811,29879909-29880061,29880812-29881278,
29881477-29881635,29881718-29881834,29881966-29882117,
29883436-29883530,29883619-29884525,29884604-29884688,
29884775-29884843,29885045-29885224,29885367-29885495
Length = 992
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 621 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNEMQSAAA 773
L + NL S + +F + KE+R PN+ F+EF + + AA
Sbjct: 428 LVIFNLDPSVSNEEVRQIFGTYGEVKEIRETPNKKHHKFIEFYDVRAAEAA 478
>01_06_0188 -
27310814-27311138,27311197-27311547,27311682-27311693,
27313598-27313662,27314945-27314968
Length = 258
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 255 LYAIFSQFGQILDIVAMKTLK--MRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 428
++ S+FG+I ++ L M G +V F+E A A ++QG + +P+ + +S
Sbjct: 80 IFEELSKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGRFYSGRPIIVDFS 139
Query: 429 KI 434
+
Sbjct: 140 PV 141
>04_03_0876 + 20493213-20493339,20493574-20493642,20493745-20493890
Length = 113
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +3
Query: 252 SLYAIFSQFGQILD--IVAMK-TLKMRGQAFVIFKEISSATVALRSMQG 389
SL FSQ+GQ+L+ IV K T + +G FV F +A A M G
Sbjct: 52 SLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEEMNG 100
>01_04_0103 +
16046012-16046018,16046214-16046366,16046908-16047158,
16047509-16047631,16047818-16047931,16048153-16048315,
16048867-16049462
Length = 468
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 209 DINGMVGSYIHCHFDYKT 156
D NG V S +HCH D KT
Sbjct: 208 DGNGSVASEVHCHHDAKT 225
>12_01_0234 +
1755704-1756120,1756203-1756313,1756923-1757063,
1757142-1757312,1757412-1757616,1757738-1757910,
1758021-1758103,1758250-1758389,1758569-1758645,
1758711-1758810,1759978-1760606
Length = 748
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +3
Query: 585 NNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR--HD--IAFVEFGN 752
NN +A + +++ NLP ++ L LF ++V L P+R HD FV F +
Sbjct: 272 NNDSASTSQVKSVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSRGGHDNRYGFVHFKD 331
Query: 753 EMQSAAA 773
+ A
Sbjct: 332 RSMAMRA 338
>02_05_0627 +
30463452-30463774,30463841-30463956,30464125-30464371,
30464458-30464555,30465216-30465284,30465752-30465820,
30465913-30466028
Length = 345
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = +3
Query: 621 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR-----HDIAFVEFGNEMQSAAAKK 779
LF+T L TSE L F F EV+++ ++ AF+E+ E AA K
Sbjct: 281 LFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAALK 338
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,554,881
Number of Sequences: 37544
Number of extensions: 368883
Number of successful extensions: 738
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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