Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2j16
         (668 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35093-1|CAA84476.1|  300|Homo sapiens SURF-1 protein.                144   3e-34
BC071658-1|AAH71658.1|  300|Homo sapiens surfeit 1 protein.           144   3e-34
BC028314-1|AAH28314.1|  300|Homo sapiens surfeit 1 protein.           144   3e-34
AL158826-12|CAI12837.1|  300|Homo sapiens surfeit 1 protein.          144   3e-34
AL158826-11|CAI12836.1|  270|Homo sapiens surfeit 1 protein.          122   9e-28

>Z35093-1|CAA84476.1|  300|Homo sapiens SURF-1 protein.
          Length = 300

 Score =  144 bits (349), Expect = 3e-34
 Identities = 72/167 (43%), Positives = 106/167 (63%)
 Frame = +3

Query: 168 KEEPTEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEK 347
           K E     +W+LL+IPVT+F LG+WQV R +WKL LI  ++++  A P+ +P D  EL+ 
Sbjct: 55  KAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKN 114

Query: 348 MEYLPVKVKGEFLHEKEILIGPRALIEESSITNRVGSLVSDPKKNQGWLVITPFKXADTG 527
           +EY PVKV+G F H KE+ + PR +++      R G L+S   ++ G  V+TPF   D G
Sbjct: 115 LEYRPVKVRGCFDHSKELYMMPRTMVDPVR-EAREGGLISSSTQS-GAYVVTPFHCTDLG 172

Query: 528 EVILINRGWIHQNLRPKEKREPSLIKGPVELTGVVRLTEKRAPFMPK 668
             IL+NRG++ +     E R+   I+G V+L G+VRLTE R PF+P+
Sbjct: 173 VTILVNRGFVPRKKVNPETRQKGQIEGEVDLIGMVRLTETRQPFVPE 219


>BC071658-1|AAH71658.1|  300|Homo sapiens surfeit 1 protein.
          Length = 300

 Score =  144 bits (349), Expect = 3e-34
 Identities = 72/167 (43%), Positives = 106/167 (63%)
 Frame = +3

Query: 168 KEEPTEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEK 347
           K E     +W+LL+IPVT+F LG+WQV R +WKL LI  ++++  A P+ +P D  EL+ 
Sbjct: 55  KAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKN 114

Query: 348 MEYLPVKVKGEFLHEKEILIGPRALIEESSITNRVGSLVSDPKKNQGWLVITPFKXADTG 527
           +EY PVKV+G F H KE+ + PR +++      R G L+S   ++ G  V+TPF   D G
Sbjct: 115 LEYRPVKVRGCFDHSKELYMMPRTMVDPVR-EAREGGLISSSTQS-GAYVVTPFHCTDLG 172

Query: 528 EVILINRGWIHQNLRPKEKREPSLIKGPVELTGVVRLTEKRAPFMPK 668
             IL+NRG++ +     E R+   I+G V+L G+VRLTE R PF+P+
Sbjct: 173 VTILVNRGFVPRKKVNPETRQKGQIEGEVDLIGMVRLTETRQPFVPE 219


>BC028314-1|AAH28314.1|  300|Homo sapiens surfeit 1 protein.
          Length = 300

 Score =  144 bits (349), Expect = 3e-34
 Identities = 72/167 (43%), Positives = 106/167 (63%)
 Frame = +3

Query: 168 KEEPTEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEK 347
           K E     +W+LL+IPVT+F LG+WQV R +WKL LI  ++++  A P+ +P D  EL+ 
Sbjct: 55  KAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKN 114

Query: 348 MEYLPVKVKGEFLHEKEILIGPRALIEESSITNRVGSLVSDPKKNQGWLVITPFKXADTG 527
           +EY PVKV+G F H KE+ + PR +++      R G L+S   ++ G  V+TPF   D G
Sbjct: 115 LEYRPVKVRGCFDHSKELYMMPRTMVDPVR-EAREGGLISSSTQS-GAYVVTPFHCTDLG 172

Query: 528 EVILINRGWIHQNLRPKEKREPSLIKGPVELTGVVRLTEKRAPFMPK 668
             IL+NRG++ +     E R+   I+G V+L G+VRLTE R PF+P+
Sbjct: 173 VTILVNRGFVPRKKVNPETRQKGQIEGEVDLIGMVRLTETRQPFVPE 219


>AL158826-12|CAI12837.1|  300|Homo sapiens surfeit 1 protein.
          Length = 300

 Score =  144 bits (349), Expect = 3e-34
 Identities = 72/167 (43%), Positives = 106/167 (63%)
 Frame = +3

Query: 168 KEEPTEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEK 347
           K E     +W+LL+IPVT+F LG+WQV R +WKL LI  ++++  A P+ +P D  EL+ 
Sbjct: 55  KAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKN 114

Query: 348 MEYLPVKVKGEFLHEKEILIGPRALIEESSITNRVGSLVSDPKKNQGWLVITPFKXADTG 527
           +EY PVKV+G F H KE+ + PR +++      R G L+S   ++ G  V+TPF   D G
Sbjct: 115 LEYRPVKVRGCFDHSKELYMMPRTMVDPVR-EAREGGLISSSTQS-GAYVVTPFHCTDLG 172

Query: 528 EVILINRGWIHQNLRPKEKREPSLIKGPVELTGVVRLTEKRAPFMPK 668
             IL+NRG++ +     E R+   I+G V+L G+VRLTE R PF+P+
Sbjct: 173 VTILVNRGFVPRKKVNPETRQKGQIEGEVDLIGMVRLTETRQPFVPE 219


>AL158826-11|CAI12836.1|  270|Homo sapiens surfeit 1 protein.
          Length = 270

 Score =  122 bits (295), Expect = 9e-28
 Identities = 68/167 (40%), Positives = 100/167 (59%)
 Frame = +3

Query: 168 KEEPTEIYKWILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEK 347
           K E     +W+LL+IPVT+F LG+WQV R +WKL LI  ++++  A P+ +P D  EL+ 
Sbjct: 37  KAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKN 96

Query: 348 MEYLPVKVKGEFLHEKEILIGPRALIEESSITNRVGSLVSDPKKNQGWLVITPFKXADTG 527
           +EY PVKV+G F H KE+ + PR +++      R G L+S   ++ G  V+TPF   D G
Sbjct: 97  LEYRPVKVRGCFDHSKELYMMPRTMVDPVR-EAREGGLISSSTQS-GAYVVTPFHCTDLG 154

Query: 528 EVILINRGWIHQNLRPKEKREPSLIKGPVELTGVVRLTEKRAPFMPK 668
                      + + P E R+   I+G V+L G+VRLTE R PF+P+
Sbjct: 155 -----------KKVNP-ETRQKGQIEGEVDLIGMVRLTETRQPFVPE 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,350,794
Number of Sequences: 237096
Number of extensions: 1803029
Number of successful extensions: 3959
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3954
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)