Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2j14
(642 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-2265|AAF53230.1| 255|Drosophila melanogaster CG16800-P... 33 0.33
X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm... 30 3.1
AY129446-1|AAM76188.1| 1009|Drosophila melanogaster LD20608p pro... 30 3.1
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P... 30 3.1
AY061123-1|AAL28671.1| 611|Drosophila melanogaster LD10456p pro... 29 5.4
AE014134-3589|AAF57260.3| 611|Drosophila melanogaster CG3278-PA... 29 5.4
AY484701-1|AAR85347.1| 881|Drosophila melanogaster dysfusion pr... 29 7.1
AE014297-3920|AAF56569.3| 881|Drosophila melanogaster CG32474-P... 29 7.1
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA... 29 7.1
AB095028-1|BAE53416.1| 918|Drosophila melanogaster bHLH-PAS pro... 29 7.1
AE014296-517|AAF47693.2| 753|Drosophila melanogaster CG9973-PA ... 28 9.4
>AE014134-2265|AAF53230.1| 255|Drosophila melanogaster CG16800-PA
protein.
Length = 255
Score = 33.1 bits (72), Expect = 0.33
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2
Query: 107 RGHFSDAGADGEHARREHHEKFHYHS 30
+GH G GEH E HEK H HS
Sbjct: 78 KGHHDKEGKKGEHGEEEGHEKKHKHS 103
>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
transmembrane protein protein.
Length = 3004
Score = 29.9 bits (64), Expect = 3.1
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +3
Query: 189 RQSLEYENQGKGSIIQNVVNNLIIDKSRNTMEYCYKLWVGNGQHI-VRKYFPYNFRLIMA 365
R Y G+ S + N+ ++ N Y W +GQ + V P+ FR
Sbjct: 2340 RMEFSYGVHGRISQTRTYTRNMAVNSYTNVKNYT---WDCDGQLVGVEAQEPWGFRYDDN 2396
Query: 366 GNFVKLIYRNYNLALKLGPTLDPANERLA-YGDGKEK 473
GN + L YR + ++ A +R+ +G+G+ K
Sbjct: 2397 GNLLSLTYRGNTIPMEYN-----AQDRIVKFGEGQYK 2428
>AY129446-1|AAM76188.1| 1009|Drosophila melanogaster LD20608p
protein.
Length = 1009
Score = 29.9 bits (64), Expect = 3.1
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +3
Query: 189 RQSLEYENQGKGSIIQNVVNNLIIDKSRNTMEYCYKLWVGNGQHI-VRKYFPYNFRLIMA 365
R Y G+ S + N+ ++ N Y W +GQ + V P+ FR
Sbjct: 345 RMEFSYGVHGRISQTRTYTRNMAVNSYTNVKNYT---WDCDGQLVGVEAQEPWGFRYDDN 401
Query: 366 GNFVKLIYRNYNLALKLGPTLDPANERLA-YGDGKEK 473
GN + L YR + ++ A +R+ +G+G+ K
Sbjct: 402 GNLLSLTYRGNTIPMEYN-----AQDRIVKFGEGQYK 433
>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
protein.
Length = 3004
Score = 29.9 bits (64), Expect = 3.1
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +3
Query: 189 RQSLEYENQGKGSIIQNVVNNLIIDKSRNTMEYCYKLWVGNGQHI-VRKYFPYNFRLIMA 365
R Y G+ S + N+ ++ N Y W +GQ + V P+ FR
Sbjct: 2340 RMEFSYGVHGRISQTRTYTRNMAVNSYTNVKNYT---WDCDGQLVGVEAQEPWGFRYDDN 2396
Query: 366 GNFVKLIYRNYNLALKLGPTLDPANERLA-YGDGKEK 473
GN + L YR + ++ A +R+ +G+G+ K
Sbjct: 2397 GNLLSLTYRGNTIPMEYN-----AQDRIVKFGEGQYK 2428
>AY061123-1|AAL28671.1| 611|Drosophila melanogaster LD10456p
protein.
Length = 611
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 559 WLYLVLWILKYTLLFSHKVMNFQLMRSLFFSLPSP 455
+LY VLW+L+Y +F V L + L + +P
Sbjct: 208 YLYNVLWLLEYKPIFEELVFQLVLQKLLLLDVNAP 242
>AE014134-3589|AAF57260.3| 611|Drosophila melanogaster CG3278-PA,
isoform A protein.
Length = 611
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 559 WLYLVLWILKYTLLFSHKVMNFQLMRSLFFSLPSP 455
+LY VLW+L+Y +F V L + L + +P
Sbjct: 208 YLYNVLWLLEYKPIFEELVFQLVLQKLLLLDVNAP 242
>AY484701-1|AAR85347.1| 881|Drosophila melanogaster dysfusion
protein.
Length = 881
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +2
Query: 470 KEQRPHQLEVHY-----LVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRH 634
++Q PHQ + H L +QQ LQ QH +Q + T + + P + QH +
Sbjct: 27 QQQHPHQQQQHLQHVLQLQQQQQQHLQQQQHHLQHQMHTHHNFQQHETSPTVSQQQHMQQ 86
Query: 635 HQ 640
Q
Sbjct: 87 QQ 88
>AE014297-3920|AAF56569.3| 881|Drosophila melanogaster CG32474-PA
protein.
Length = 881
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +2
Query: 470 KEQRPHQLEVHY-----LVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRH 634
++Q PHQ + H L +QQ LQ QH +Q + T + + P + QH +
Sbjct: 27 QQQHPHQQQQHLQHVLQLQQQQQQHLQQQQHHLQHQMHTHHNFQQHETSPTVSQQQHMQQ 86
Query: 635 HQ 640
Q
Sbjct: 87 QQ 88
>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
protein.
Length = 2284
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 345 YRGSTF*QCAVRCRPTACSSTPWCS 271
Y GST +C R RPT +S P CS
Sbjct: 499 YPGSTDPECQPRTRPTITTSQPRCS 523
>AB095028-1|BAE53416.1| 918|Drosophila melanogaster bHLH-PAS
protein similar to humanNXF protein.
Length = 918
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +2
Query: 470 KEQRPHQLEVHY-----LVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRH 634
++Q PHQ + H L +QQ LQ QH +Q + T + + P + QH +
Sbjct: 63 QQQHPHQQQQHLQHVLQLQQQQQQHLQQQQHHLQHQMHTHHNFQQHETSPTVSQQQHMQQ 122
Query: 635 HQ 640
Q
Sbjct: 123 QQ 124
>AE014296-517|AAF47693.2| 753|Drosophila melanogaster CG9973-PA
protein.
Length = 753
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +2
Query: 158 HPHR*LRQRCPSELGIREPRQGLHHPECS*QPDH*QESEHHGVLLQAVGRQRTAHCQK 331
HPH +Q P + +++ +Q HH + Q Q+ + RQ+ H Q+
Sbjct: 64 HPHHHYQQHYPQQQHLQQQQQQQHHAQQQHQQQQQQQQQQQQQHWDYYARQQQQHQQQ 121
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,409,133
Number of Sequences: 53049
Number of extensions: 585359
Number of successful extensions: 2844
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2826
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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