Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2j12
(714 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme... 93 2e-19
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical pr... 48 9e-06
AL023828-1|CAA19448.1| 115|Caenorhabditis elegans Hypothetical ... 45 5e-05
Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a... 38 0.005
U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical pr... 34 0.088
>AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 1 protein.
Length = 86
Score = 92.7 bits (220), Expect = 2e-19
Identities = 45/82 (54%), Positives = 58/82 (70%)
Frame = +1
Query: 88 FDQAAANVKNLXALPTDAQLLNLYAHFKQATVGDADPANRPGLLXLKGKAKFDAWHKLAG 267
FD AAA VK L P++ +LL LYA FKQ TVGD + ++PG+ LKGKAK+ AW + G
Sbjct: 5 FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKG 63
Query: 268 TSKEDAQKAYIEIVEGLIASIG 333
+K+DAQKAY+ +VE LIA G
Sbjct: 64 LAKDDAQKAYVALVEELIAKYG 85
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/86 (40%), Positives = 53/86 (61%)
Frame = +1
Query: 67 NMSLQEKFDQAAANVKNLXALPTDAQLLNLYAHFKQATVGDADPANRPGLLXLKGKAKFD 246
+ S Q F++A N+K L P + L LY FKQAT GD RPG++ G+AK+D
Sbjct: 22 SFSAQADFEKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKRPGMMDFVGRAKYD 80
Query: 247 AWHKLAGTSKEDAQKAYIEIVEGLIA 324
AW+ L G ++++A+ Y ++V GLI+
Sbjct: 81 AWNTLKGQTQDEARANYAKLVGGLIS 106
>Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical
protein F47B10.7 protein.
Length = 116
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Frame = +1
Query: 70 MSLQEKFDQAAANVKNLX----ALPTDAQLLNLYAHFKQATVGDADPANRPGLLXLKGKA 237
MSLQEKFD A ++ L ++ Q L Y+ FKQA++GD + +RPG+ + +
Sbjct: 1 MSLQEKFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVN-TDRPGIFSIIERK 59
Query: 238 KFDAWHKLAGTSKEDAQKAYIEIVEGLIASI 330
K+D+W +L G S+++A++ YI+ + + I
Sbjct: 60 KWDSWKELEGVSQDEAKERYIKALNDMFDKI 90
>Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical
protein C18D11.2 protein.
Length = 266
Score = 47.6 bits (108), Expect = 9e-06
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +1
Query: 148 LNLYAHFKQATVGDADPANRPGLLXLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIAS 327
LN YA FKQAT G D +P ++G K++AW+KL + ++A++AY++ + I
Sbjct: 28 LNFYALFKQATHGKCD-LPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSIVQKIRE 86
Query: 328 IGLKE*KT 351
+ KE KT
Sbjct: 87 V-QKEYKT 93
>AL023828-1|CAA19448.1| 115|Caenorhabditis elegans Hypothetical
protein Y17G7B.1 protein.
Length = 115
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +1
Query: 88 FDQAAANVKNLXALPTDAQLLNLYAHFKQATVGD---ADPANRPGLLXLKGKAKFDAWHK 258
F+ AA ++ L + PTD + L LYA +KQA GD D P + G+ K+ AW
Sbjct: 15 FEIAAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEV-GRKKYAAWKS 73
Query: 259 LAGTSKEDAQKAYIEIVEGLIASIG 333
G + E + Y+ I E +I G
Sbjct: 74 QKGANSEKCRADYVAIAEEMIKKYG 98
>Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical
protein T12D8.3 protein.
Length = 274
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/88 (28%), Positives = 38/88 (43%)
Frame = +1
Query: 64 INMSLQEKFDQAAANVKNLXALPTDAQLLNLYAHFKQATVGDADPANRPGLLXLKGKAKF 243
I+ L+ KFD A + +L Y +KQA G AD P + KF
Sbjct: 24 IDTLLEAKFDAATTRLPGFLTKIDQKTILKFYGLYKQAVEGPADSKKGPYWFETVARKKF 83
Query: 244 DAWHKLAGTSKEDAQKAYIEIVEGLIAS 327
++W + S+ A +AY E++ L S
Sbjct: 84 NSWLANSQMSRSRAMEAYCELMAQLDTS 111
>U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 4 protein.
Length = 146
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +1
Query: 73 SLQEKFDQAA----ANVKNLXALPTDAQLLNLYAHFKQATVGDADPANRPGLLXLKGKAK 240
SL E+F+ A A KN + L +Y+ +KQAT G D +P ++ + K
Sbjct: 4 SLDEQFEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTI-QPYFFQIEQRMK 62
Query: 241 FDAWHKLAGTSKEDAQKAYIE 303
++AW++L + +A+ Y+E
Sbjct: 63 WNAWNQLGNMDEAEAKAQYVE 83
>U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical
protein F26A1.15 protein.
Length = 219
Score = 34.3 bits (75), Expect = 0.088
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 223 LKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 318
+ G K+ AW+K G +KE+A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,875,728
Number of Sequences: 27780
Number of extensions: 282833
Number of successful extensions: 587
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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