Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2j11
(739 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr... 52 6e-08
SPCC18.02 |||membrane transporter|Schizosaccharomyces pombe|chr ... 43 5e-05
SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|c... 41 2e-04
SPAC11D3.18c |||nicotinic acid plasma membrane transporter |Schi... 41 2e-04
SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|... 41 2e-04
SPBC1773.15 |||membrane transporter|Schizosaccharomyces pombe|ch... 37 0.003
SPBC1683.12 |||nicotinic acid plasma membrane transporter |Schiz... 36 0.005
SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter |Schizosa... 36 0.008
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 30 0.30
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 28 1.6
SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces pom... 27 2.8
SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|ch... 27 3.7
SPBPB2B2.16c |||MFS family membrane transporter |Schizosaccharom... 27 3.7
SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 3.7
SPBC691.05c ||SPBP22H7.01c|membrane transporter |Schizosaccharom... 27 3.7
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|... 26 4.9
SPBC776.07 |||mitochondrial Mam33 family protein|Schizosaccharom... 25 8.5
SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 8.5
>SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 508
Score = 52.4 bits (120), Expect = 6e-08
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 4/178 (2%)
Frame = +3
Query: 168 MICMSFCMIALYMARSSLGVAILAMTDVSRKNDTNVEVYNWDKKTQGLILSSFFWGYMTM 347
++C+ +C+ L +S V + D+ + ++Y+W ++F+ GY+
Sbjct: 68 VMCLVYCIQFLDKTSNSYAVIMGLKEDLKMEG----QMYSWSG-------TAFYLGYLVF 116
Query: 348 QIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVASLGGWPMICLCRVLMGLTQACLFPA 527
+ PA LL +++ L V L+ G L + S+ +P RVL+G+ ++ P
Sbjct: 117 EFPASLLLQRFPLSKTLCVFLVIWGFLLCM----TSVANYPGFIALRVLLGMMESAASPG 172
Query: 528 SHTLLGRWLPANERTTLAGVVYGGAQMGTIIAMPVS-GVLAETAM---GWKLIFYATG 689
L +W +E+ V +G I+ ++ G+ T++ GWKLIF G
Sbjct: 173 FILLTAQWYKRSEQQLRTSVWVAFNGLGQILGSCMAYGLAKRTSLPMRGWKLIFIICG 230
>SPCC18.02 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 448
Score = 42.7 bits (96), Expect = 5e-05
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +3
Query: 354 PAGLLAKKYGGKPI-LLVALLANGSLCVLLPTVASLGGWPMICLCRVLMGLTQACLFPAS 530
P G LA K+ + + +L+ L+ S LL S+ PM+ + RVL GL+ A ++
Sbjct: 74 PIGFLADKFLTRKVPMLIGLIFLTSATALLTFGNSV---PMLIVARVLQGLSAAVVWTVG 130
Query: 531 HTLLGRWLPANERTTLAGVVYGGAQMGTIIAMPVSGVLAETAMGWKLIFYATGGSMFV 704
LL + A+ + G ++G +G IIA PV G + ++G +YA+ G F+
Sbjct: 131 LALLVDVVGADNVGSTMGGIFGFISLGEIIA-PVFGGIVYESLG----YYASFGVCFI 183
>SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 41.1 bits (92), Expect = 2e-04
Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 3/206 (1%)
Frame = +3
Query: 78 EKKFAK-MLRREPGRLSVSAKKFGFGIRHVQMICMSFCMIALYMARSSLGVAILAMTDVS 254
EK+ +K +++ E L V +K + H +++ + A M ++ LG +I +
Sbjct: 17 EKESSKDLVQNEDTPLPV--QKISMSLFH-EIVFVFIACTAQLMTQAGLGQSIAPNNIIG 73
Query: 255 RK-NDTNVEVYNWDKKTQGLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLC 431
+ TN +W + L + +F + AG L YG K + ++ +
Sbjct: 74 KSLGTTNPGQLSWFPASYSLTVGTFI-------LIAGRLGDIYGHKKMFVLGYIWFCIWS 126
Query: 432 VLLPTVASLGGWPMICLCRVLMGLTQACLFPASHTLLGRWLPANERTTLAGVVYGG-AQM 608
++ M +CR L G+ A L P + LLGR P ++ L ++G A
Sbjct: 127 LISGFSYYAKSVIMFDVCRALTGIAPAFLLPNALALLGRVYPPGKKKNLIFALFGATAPN 186
Query: 609 GTIIAMPVSGVLAETAMGWKLIFYAT 686
G ++ SG+ A+ + W ++ T
Sbjct: 187 GFLLGSVFSGIFAQLSW-WPWTYWTT 211
>SPAC11D3.18c |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 41.1 bits (92), Expect = 2e-04
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 5/181 (2%)
Frame = +3
Query: 177 MSFCMIALYMARSSLG-VAILAMTDVSRKNDTNVEVYNWDKKTQGLILSSFFWGYMTMQI 353
+ F + ++ RS++G A+ MT+ + +Y + + +S F+ Y+ ++
Sbjct: 65 IGFLYLMAFLDRSNIGNAAVAGMTEA-------LSLYG---ERLNVAVSIFYVLYILVET 114
Query: 354 PAGLLAKKYGGKPILLVALLANGSLCVLLPTVASLGGWPMICLCRVLMGLTQACLFPASH 533
P+ +L K+ +L A + ++S GG + R+++GL + CLFPA +
Sbjct: 115 PSVVLVKRIKASRMLAFISFAWSMTVLFSGFMSSYGG---LIATRLILGLLEGCLFPALN 171
Query: 534 TLLGRWLPANERTTLAGVVYGGAQM----GTIIAMPVSGVLAETAMGWKLIFYATGGSMF 701
L E+ ++ A + G + A + V A GW+ I+ G F
Sbjct: 172 LYLTTHYTRKEQCQRLSYLFASAGLAGAFGGLFAYALEQVHAGNKEGWQWIYIVEGLVSF 231
Query: 702 V 704
+
Sbjct: 232 I 232
>SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 570
Score = 40.7 bits (91), Expect = 2e-04
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Frame = +3
Query: 324 FFWGYMTMQIPAGLLAKKYG-GKPILLVALLANGSLCVLLPTVA-SLGGWPMICLCRVLM 497
F+ GY+ Q P + + + GK + LV + S+ V L A + GG +I L R +
Sbjct: 146 FYVGYIVGQFPGHYIMQTFPLGKFVGLVTF--SWSVIVFLHCCAYNYGG--LIAL-RFFL 200
Query: 498 GLTQACLFPASHTLLGRWLPANERTTLAGVVYGGA-QMGTIIAMPVSGV--LAETAMGWK 668
G T++CL PA +G + E+ L V + G G+ + ++ WK
Sbjct: 201 GFTESCLLPAMEATMGMFFTHQEQAFLQPVFWISCLSCGIPAGFIAYGLEFVTKSIAPWK 260
Query: 669 LIFYATGG-SMFVTAGLWFWF 728
L TGG + F++ L+F++
Sbjct: 261 LFMIITGGITFFLSIFLFFYY 281
>SPBC1773.15 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 497
Score = 36.7 bits (81), Expect = 0.003
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Frame = +3
Query: 318 SSFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVASLGGWPMICLCRVLM 497
+SF+ G+M +P L +K+ + ++A G L L V S + R L+
Sbjct: 94 TSFYLGFMVFSLPLSTLLQKFPLSKVTSAFIVAWGILMTLTCLVHSYASY---IATRTLL 150
Query: 498 GLTQACLFPASHTLLGRWLPANERTTLAGVVYGGAQMGTIIAMPVSGVLAE-------TA 656
G+ ++ + PA + +W E+ + +G +I +S L + T
Sbjct: 151 GILESVITPAFVLFIAQWYRKEEQFFRMAFLVAWNGLGGLIGGSMSYGLYKRELENNLTM 210
Query: 657 MGWKLIFYATG 689
W+++F TG
Sbjct: 211 SPWRILFIITG 221
>SPBC1683.12 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 36.3 bits (80), Expect = 0.005
Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 8/184 (4%)
Frame = +3
Query: 201 YMARSSLGVAILAMTDVSRKNDTNVEVYNWDKKTQGLILSSFFWGYMTMQIPAGLLAKKY 380
++ R+++G A + V K D ++ Y + +S F+ Y+T + P+ LL KK+
Sbjct: 56 FLDRANIGNAAV----VGLKEDLKLQAYQYSAA-----VSVFYATYITAETPSVLLVKKF 106
Query: 381 GGKPILLVALLANGSLCVLLPTVASLGGWPMICLCRVLMGLTQACLFPASHTLLGRWLPA 560
G P ++ + G V + T W ++ L R+L+G+ + FP +
Sbjct: 107 G--PHYYLSAMIIGWSLVTIFTCFVRHYWSLV-LTRLLLGICEGGFFPCLSLYISMTYKR 163
Query: 561 NERTTLAGVVY-----GGAQMGTIIAMPVSGVLAETAM---GWKLIFYATGGSMFVTAGL 716
E+ +Y GA G +IA ++ + + + GW Y G + + L
Sbjct: 164 EEQGKRLAYLYVCSCFSGA-FGGLIATGLTKIPKSSGLPNWGW---LYIIEGLISAISAL 219
Query: 717 WFWF 728
W F
Sbjct: 220 WILF 223
>SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 35.5 bits (78), Expect = 0.008
Identities = 23/100 (23%), Positives = 42/100 (42%)
Frame = +3
Query: 324 FFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVASLGGWPMICLCRVLMGL 503
F GY+ Q+P ++ + V + G + + V S+ + + R M +
Sbjct: 76 FTCGYIIGQLPGSYALQRVPARLWFSVMNILWGLMTIFSFAVHSVRA---LMILRFFMAV 132
Query: 504 TQACLFPASHTLLGRWLPANERTTLAGVVYGGAQMGTIIA 623
+A F +H +LG W +E AG+ +GT+ A
Sbjct: 133 AEASTFAGTHYILGAWYKESELCKRAGIFSASGLVGTMFA 172
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 30.3 bits (65), Expect = 0.30
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 435 LLPTVASLGGWPMICLCRVLMGLTQACLFPASHTLLGRWLPA-NERTTLAGVVYGGAQMG 611
L+ + L P++ LC M + L+ T W +ER ++AG+ Y + +G
Sbjct: 266 LMRPIRMLFTQPIVILCSTYMAIQYGILYLVLTTYPTLWTEEYHERPSIAGLNYIASGIG 325
Query: 612 TIIAMPVSGVLAE 650
I SG+ +
Sbjct: 326 LIFGSQASGIFID 338
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 27.9 bits (59), Expect = 1.6
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Frame = +3
Query: 306 GLILSSFFWGYMTMQIPAGLLAKKYGGKPI----LLVALLANGSLCVLLPTVAS-LGGWP 470
GL+ ++ G + QI G + +G K + ++V ++A + L ++ + LG
Sbjct: 91 GLVNAAANIGNVFGQILFGFMGDFFGRKFVYGKEMIVVIIATVLVIALPKSIPTPLGKMM 150
Query: 471 MICLCRVLMGLTQACLFPASHTLLGRWLPANERTTLAGVVYGGAQMGTIIAMPVSGVL 644
I R L+GL +P S T+ + R TL +V+ GT+ V+ +L
Sbjct: 151 WIFAWRWLLGLGIGGDYPMSATITSERSLLSRRGTLLSIVFSFQGFGTLAGAIVTIIL 208
>SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 703
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -1
Query: 520 KRQACVKPMSTRQRHIIGQPPKLATVGNSTQSDPFANNATSSI 392
KR C K + + + + G S+Q+D FA+N ++S+
Sbjct: 65 KRDLCTKTKHIEELQTLLSNANIMSDGASSQNDAFAHNPSTSV 107
>SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 26.6 bits (56), Expect = 3.7
Identities = 21/105 (20%), Positives = 45/105 (42%)
Frame = +3
Query: 366 LAKKYGGKPILLVALLANGSLCVLLPTVASLGGWPMICLCRVLMGLTQACLFPASHTLLG 545
L++++G +PI L+ L + + +L M + R GL + L
Sbjct: 101 LSEQFGRRPIYLIGYSVFALLQIPIALSVNLA---MFLVFRFFSGLFGSVGLSNGSGSLA 157
Query: 546 RWLPANERTTLAGVVYGGAQMGTIIAMPVSGVLAETAMGWKLIFY 680
+R + + +G IA +SG ++++++GW+ F+
Sbjct: 158 DLFEKKDRGKYMVIYFTVLSIGPGIAPIISGFISQSSIGWQWEFW 202
>SPBPB2B2.16c |||MFS family membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 26.6 bits (56), Expect = 3.7
Identities = 21/105 (20%), Positives = 45/105 (42%)
Frame = +3
Query: 366 LAKKYGGKPILLVALLANGSLCVLLPTVASLGGWPMICLCRVLMGLTQACLFPASHTLLG 545
L++++G +PI L+ L + + +L M + R GL + L
Sbjct: 101 LSEQFGRRPIYLIGYSVFALLQIPIALSVNLA---MFLVFRFFSGLFGSVGLSNGSGSLA 157
Query: 546 RWLPANERTTLAGVVYGGAQMGTIIAMPVSGVLAETAMGWKLIFY 680
+R + + +G IA +SG ++++++GW+ F+
Sbjct: 158 DLFEKKDRGKYMVIYFTVLSIGPGIAPIISGFISQSSIGWQWEFW 202
>SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 26.6 bits (56), Expect = 3.7
Identities = 21/105 (20%), Positives = 45/105 (42%)
Frame = +3
Query: 366 LAKKYGGKPILLVALLANGSLCVLLPTVASLGGWPMICLCRVLMGLTQACLFPASHTLLG 545
L++++G +PI L+ L + + +L M + R GL + L
Sbjct: 101 LSEQFGRRPIYLIGYSVFALLQIPIALSVNLA---MFLVFRFFSGLFGSVGLSNGSGSLA 157
Query: 546 RWLPANERTTLAGVVYGGAQMGTIIAMPVSGVLAETAMGWKLIFY 680
+R + + +G IA +SG ++++++GW+ F+
Sbjct: 158 DLFEKKDRGKYMVIYFTVLSIGPGIAPIISGFISQSSIGWQWEFW 202
>SPBC691.05c ||SPBP22H7.01c|membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 668
Score = 26.6 bits (56), Expect = 3.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 527 QSHAPGKMVTSKRTYYPGWRCIRRST 604
QS+ ++ + R YYP W I RST
Sbjct: 257 QSYRVDSLLGTARPYYPQWEIIVRST 282
>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 699
Score = 26.2 bits (55), Expect = 4.9
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = -3
Query: 254 RNIGHGQNRDSKTAARHVQSYHAERHAYHLYMTNAEAEFLSRNTESSRFPTQHLSKF 84
+NI +G NRD+ + + ++ E L NTE + PT +S+F
Sbjct: 126 KNIENGGNRDTSSRIEELSEEEINDSTKNINYKAPEMGSLPSNTEFTSTPTLGVSEF 182
>SPBC776.07 |||mitochondrial Mam33 family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 25.4 bits (53), Expect = 8.5
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Frame = -1
Query: 487 RQRHIIGQPPKLATVGNSTQSDPFANNATSSIGFPP--YFFARSPAGICIVM*PQKNDDN 314
R H G P S++ D N S I PP Y +V+ + D+N
Sbjct: 49 RSSHTAGNPRSKLINALSSEIDYEKNQVLSEISLPPVNYDIEDVQGSAVVVLKAKHGDEN 108
Query: 313 IRP*VFLSQ 287
IR + +SQ
Sbjct: 109 IRITMNVSQ 117
>SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 547
Score = 25.4 bits (53), Expect = 8.5
Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 1/160 (0%)
Frame = +3
Query: 204 MARSSLGVAILAMTDV-SRKNDTNVEVYNWDKKTQGLILSSFFWGYMTMQIPAGLLAKKY 380
+ S + + I A + + S + Y+ L ++F G+ + L++ Y
Sbjct: 112 LVASFIAIVITANSSIFSDGGGIAAQQYHVGATVGDLCSATFLLGFAAGSVLFAPLSEVY 171
Query: 381 GGKPILLVALLANGSLCVLLPTVASLGGWPMICLCRVLMGLTQACLFPASHTLLGRWLPA 560
G P+ V L+ + + S W ++ + R G A +
Sbjct: 172 GRLPLYSVTLVI--FVVFQIGGGCSKNIWSLV-IFRFFHGFFGCTPMSACGGTISDLFNP 228
Query: 561 NERTTLAGVVYGGAQMGTIIAMPVSGVLAETAMGWKLIFY 680
+RT V A +G ++ + G + E+ +GW+ F+
Sbjct: 229 IQRTGALLVFCAAAFVGPLVGPVMGGYITESKLGWRWDFW 268
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,279,579
Number of Sequences: 5004
Number of extensions: 70793
Number of successful extensions: 235
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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