Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2j11
(739 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 106 2e-23
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 99 2e-21
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 88 8e-18
11_01_0557 + 4394754-4396040 86 3e-17
01_06_1363 - 36681605-36681789,36681875-36681908,36682017-366821... 79 3e-15
12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106 64 8e-11
09_06_0242 - 21806370-21806483,21806574-21806660,21806865-218069... 62 4e-10
01_01_1157 - 9203448-9203560,9204725-9204768,9205345-9205433,920... 37 0.015
02_05_0156 + 26341904-26342801,26343469-26344148 36 0.025
05_03_0227 + 10655204-10655269,10656333-10656393,10656570-106566... 33 0.18
06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219... 33 0.24
08_01_0370 + 3275771-3275789,3275972-3276976,3277062-3277624 32 0.41
03_01_0204 + 1611837-1611840,1611926-1612048,1614570-1614659,161... 31 0.72
11_06_0291 + 22008412-22012284 30 2.2
06_03_1218 - 28488661-28488757,28488924-28488988,28489352-284894... 29 5.1
11_02_0063 + 7916048-7917135,7917225-7918690,7920177-7920238,792... 28 6.7
01_06_0959 - 33362810-33363125,33363309-33363475,33363583-333644... 28 6.7
02_04_0121 - 19943988-19944251,19944534-19944734,19944802-199451... 28 8.9
>09_06_0351 +
22466160-22466217,22466514-22467052,22467186-22467293,
22467391-22467546,22467916-22468131,22468639-22468776,
22468880-22468981,22469089-22469146,22469346-22469408,
22469543-22469640
Length = 511
Score = 106 bits (254), Expect = 2e-23
Identities = 60/186 (32%), Positives = 94/186 (50%)
Frame = +3
Query: 162 VQMICMSFCMIALYMARSSLGVAILAMTDVSRKNDTNVEVYNWDKKTQGLILSSFFWGYM 341
V ++C F + M R ++ +AIL M+ + W T GLI SSFFWGY+
Sbjct: 184 VVLLCF-FSFLLCNMDRVNMSIAILPMSSE----------FGWSPATVGLIQSSFFWGYL 232
Query: 342 TMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVASLGGWPMICLCRVLMGLTQACLF 521
QI G+ A ++GGK +L ++ VL P A + G P + + R MG+ +
Sbjct: 233 LTQILGGIWADRFGGKVVLGFGVVWWSIATVLTPLAAKI-GLPFLLVMRAFMGIGEGVAM 291
Query: 522 PASHTLLGRWLPANERTTLAGVVYGGAQMGTIIAMPVSGVLAETAMGWKLIFYATGGSMF 701
PA + +L +W+P +ER+ +VY G +G++ + S +L + GW +FYA G
Sbjct: 292 PAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLI-SRFGWPSVFYAFGSLGS 350
Query: 702 VTAGLW 719
V LW
Sbjct: 351 VWFALW 356
>01_01_1227 +
9912646-9913056,9913306-9913413,9913517-9913672,
9914110-9914325,9914436-9914645,9914722-9914859,
9915076-9915177,9915508-9915603
Length = 478
Score = 99 bits (238), Expect = 2e-21
Identities = 53/150 (35%), Positives = 80/150 (53%)
Frame = +3
Query: 282 YNWDKKTQGLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVASLG 461
+ W+ +T GLI SSFFWGY+ QI G+ A GGK +L ++ L P A L
Sbjct: 151 FGWNPQTVGLIQSSFFWGYLLTQIAGGIWADTVGGKTVLGFGVIWWSIATALTPFAAKL- 209
Query: 462 GWPMICLCRVLMGLTQACLFPASHTLLGRWLPANERTTLAGVVYGGAQMGTIIAMPVSGV 641
G P + + R MG+ + PA + +L +W+P +ER+ +VY G +G++ + S +
Sbjct: 210 GLPFLLVTRAFMGVGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPL 269
Query: 642 LAETAMGWKLIFYATGGSMFVTAGLWFWFS 731
L GW +FY+ GS+ V FWFS
Sbjct: 270 LIHN-FGWPSVFYSF-GSLGV-----FWFS 292
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 87.8 bits (208), Expect = 8e-18
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Frame = +3
Query: 282 YNWDKKTQGLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVASLG 461
Y W G++ SSF WGY+ + G LA +YGGK ++ A A SL L A+
Sbjct: 154 YGWSSSFLGIVQSSFLWGYVFSSMVGGALADRYGGKKVMAGAA-ALWSLATFLTPWAASQ 212
Query: 462 GWPMICLCRVLMGLTQACLFPASHTLLGRWLPANERTTLAGVVYGGAQMGTIIA-MPVSG 638
M+ R L GL + FP T L +W P +ER T G+ GG +G +I+ +
Sbjct: 213 STIMLLAIRALFGLAEGVAFPTMSTFLPKWFPTHERATAVGISMGGFHLGNVISFLATPI 272
Query: 639 VLAETAMGWKLIFYATGGSMFVTAGLW 719
+++ + F+A+ G ++++ L+
Sbjct: 273 IMSHIGLAGTFAFFASLGYLWLSVWLF 299
>11_01_0557 + 4394754-4396040
Length = 428
Score = 85.8 bits (203), Expect = 3e-17
Identities = 54/194 (27%), Positives = 92/194 (47%)
Frame = +3
Query: 147 FGIRHVQMICMSFCMIALYMARSSLGVAILAMTDVSRKNDTNVEVYNWDKKTQGLILSSF 326
F R+ ++ C Y+ R +A D N N +G+ILS F
Sbjct: 3 FPKRYAIVLLTFMCTNVCYIERVGFSIAYTVAADAVGTNQAN----------KGMILSMF 52
Query: 327 FWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVASLGGWPMICLCRVLMGLT 506
++GY+ QIP G A++ GG+ +LL++ + S+C ++P ++ L R+L+G+
Sbjct: 53 YYGYVLSQIPGGWAAQRLGGRLVLLLSFVLWSSICAVVP--LDPNRVILLVLSRLLVGVA 110
Query: 507 QACLFPASHTLLGRWLPANERTTLAGVVYGGAQMGTIIAMPVSGVLAETAMGWKLIFYAT 686
Q +FP+ HT+L +W+P ER+ + G +G M + L + MG + +F
Sbjct: 111 QGLIFPSIHTVLAQWVPPQERSRSVSLTTSGMYLGAACGMLLLPSLVKN-MGPQSVFSVE 169
Query: 687 GGSMFVTAGLWFWF 728
+M A L WF
Sbjct: 170 --AMLGVAWLLIWF 181
>01_06_1363 -
36681605-36681789,36681875-36681908,36682017-36682154,
36682578-36682724,36682821-36682865,36683043-36683331,
36683443-36683669,36684109-36684528
Length = 494
Score = 79.4 bits (187), Expect = 3e-15
Identities = 37/127 (29%), Positives = 61/127 (48%)
Frame = +3
Query: 276 EVYNWDKKTQGLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVAS 455
+ Y W G++ SSF WGY+ I G L YGGK ++ + L P A+
Sbjct: 127 QAYGWTPSFAGVVQSSFLWGYLVSPIIGGALVDYYGGKRVMAYGVALWSLATFLSPWAAA 186
Query: 456 LGGWPMICLCRVLMGLTQACLFPASHTLLGRWLPANERTTLAGVVYGGAQMGTIIAMPVS 635
W + RVL+G+ + P+ + ++ RW P ER++ G+ G Q+G I + +S
Sbjct: 187 RSLW-LFLSTRVLLGMAEGVALPSMNNMVLRWFPRTERSSAVGIAMAGFQLGNTIGLLLS 245
Query: 636 GVLAETA 656
++ A
Sbjct: 246 PIIMSRA 252
>12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106
Length = 427
Score = 64.5 bits (150), Expect = 8e-11
Identities = 42/161 (26%), Positives = 78/161 (48%)
Frame = +3
Query: 252 SRKNDTNVEVYNWDKKTQGLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLC 431
SR+ ++ V + +K L++S G +IP G A++ GG+ +LL++ + +C
Sbjct: 25 SRRAPADLSVPRYGRKRGRLMVSP---GEYLWEIPGGWAAQRIGGRRVLLLSFVLWSLIC 81
Query: 432 VLLPTVASLGGWPMICLCRVLMGLTQACLFPASHTLLGRWLPANERTTLAGVVYGGAQMG 611
L+P ++ L R+ +G+ Q +FPA HT+L +W+P ER+ + G +G
Sbjct: 82 GLIPLDPKRE--VILVLSRLFVGVAQGFIFPAIHTVLAQWVPPQERSRSVSLTTSGMYLG 139
Query: 612 TIIAMPVSGVLAETAMGWKLIFYATGGSMFVTAGLWFWFSA 734
M L + MG + +F+ + +W FS+
Sbjct: 140 AAGGMLFFPSLVK-HMGAQSVFFVEAVLGVAWSVIWLKFSS 179
>09_06_0242 -
21806370-21806483,21806574-21806660,21806865-21806917,
21806999-21807140,21807406-21807501,21808617-21808785,
21808859-21808939,21809032-21809106,21810322-21810387,
21811013-21811158,21811898-21812344
Length = 491
Score = 62.1 bits (144), Expect = 4e-10
Identities = 34/103 (33%), Positives = 52/103 (50%)
Frame = +3
Query: 144 GFGIRHVQMICMSFCMIALYMARSSLGVAILAMTDVSRKNDTNVEVYNWDKKTQGLILSS 323
G R+ + S + M + +L VAI+ M+ Y W+ T GL+ SS
Sbjct: 127 GLAERYKLIGATSLAFVICNMDKVNLSVAIIPMS----------HQYGWNSSTAGLVQSS 176
Query: 324 FFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVA 452
FFWGY Q+P G LAK +GG+ +L + ++A ++P VA
Sbjct: 177 FFWGYALSQLPGGWLAKLFGGRRVLEIGVVAWSLATAIIPAVA 219
>01_01_1157 -
9203448-9203560,9204725-9204768,9205345-9205433,
9205565-9205609,9205805-9205912,9206003-9206088,
9206492-9206579,9206725-9206910,9207181-9207256,
9207332-9207381,9207715-9207777,9207882-9207962,
9208028-9208130,9208246-9208348,9208489-9208549,
9209059-9209154,9209185-9209225,9209848-9209922,
9210412-9210562
Length = 552
Score = 37.1 bits (82), Expect = 0.015
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 8/132 (6%)
Frame = +3
Query: 306 GLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVASLGGWPMICLC 485
G + +S+ +G + G++A KYG KPI+++ L+ S+ + + M
Sbjct: 139 GFVGASYMFGRALSSVIWGIVADKYGRKPIIIITLI---SIIIFNTLFGLSSSYWMALTS 195
Query: 486 RVLMGLTQACLFPASHTLLGRWLPA-------NERTTLA-GVVYGGAQMGTIIAMPVSGV 641
R L+GL L P H L A E L +V +G I+ + G
Sbjct: 196 RGLLGLMCGILGPIKHYFLISVFQAYATEVCRKEHGHLGLSLVSSSRGIGLIVGPAIGGY 255
Query: 642 LAETAMGWKLIF 677
LA+ A + IF
Sbjct: 256 LAQPADKYPSIF 267
>02_05_0156 + 26341904-26342801,26343469-26344148
Length = 525
Score = 36.3 bits (80), Expect = 0.025
Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 2/120 (1%)
Frame = +3
Query: 321 SFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPT--VASLGGWPMICLCRVL 494
+F Y AG L + + L V ++ +G+ L SL +V+
Sbjct: 77 AFLAFYSLGMFVAGHLGDRLDLRLFLAVGMIGSGTAVALFGVGYFLSLHSLAFYLAAQVI 136
Query: 495 MGLTQACLFPASHTLLGRWLPANERTTLAGVVYGGAQMGTIIAMPVSGVLAETAMGWKLI 674
GL Q+ +P+ ++G W R + G+ +G I ++ + GW I
Sbjct: 137 AGLLQSTGWPSVVAIVGNWFRGRRRGLIMGIWNAHTSIGNISGSLIAAAVLRYGWGWSFI 196
>05_03_0227 +
10655204-10655269,10656333-10656393,10656570-10656672,
10656768-10656870,10656951-10657004,10657124-10657186,
10657884-10658105,10658249-10658336,10658561-10658646,
10659003-10659110,10659201-10659245,10659511-10659601,
10659662-10659765
Length = 397
Score = 33.5 bits (73), Expect = 0.18
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 306 GLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLA 416
G + +S+F +P G+ A KYG KP +++++L+
Sbjct: 40 GFVAASYFLARTFSSVPWGIFADKYGRKPCIVISILS 76
>06_03_0980 +
26520832-26520922,26521021-26521409,26521612-26521927,
26522869-26523769,26524103-26524184
Length = 592
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +1
Query: 490 YSWA*RKLASFQPVTRSWE----DGYQQTNVLPWLALYTEEH 603
Y W R+LA FQPV R W+ G + NV PW +T +H
Sbjct: 176 YEWVERELA-FQPVVRGWQAAVRAGLLEANVTPWNG-FTMDH 215
>08_01_0370 + 3275771-3275789,3275972-3276976,3277062-3277624
Length = 528
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +3
Query: 486 RVLMGLTQACLFPASHTLLGRWLPANERTTLAGVVYGGAQMGTIIAMPVSGVLAETAMGW 665
+++ GL QA +P+ ++G W ++R + G+ +G I ++ L + GW
Sbjct: 184 QMIAGLFQAIGWPSVVAIVGNWFGKSKRGLIMGIWNAHTSVGNISGSLLAAFLLKFGWGW 243
Query: 666 -----KLIFYATGGSMFV 704
LI A G +FV
Sbjct: 244 SFAIPSLIMVAVGLLVFV 261
>03_01_0204 +
1611837-1611840,1611926-1612048,1614570-1614659,
1615529-1616095,1616235-1616959,1617065-1617252,
1617331-1617778
Length = 714
Score = 31.5 bits (68), Expect = 0.72
Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 1/150 (0%)
Frame = +3
Query: 258 KNDTNVEVYNWDKKTQGLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVL 437
KN+ N++ D +GLIL+ G + +G++ G +P+L VA + S+ L
Sbjct: 79 KNEFNLQN---DPMMEGLILAMSLIGATIITALSGMITNSIGKRPLLSVAAILY-SISAL 134
Query: 438 LPTVASLGGWPMICLCRVLMGLTQACLFPASHTLLGRWLPANERTTLAGVVYGGAQMGTI 617
+ AS M+ L R++ G + + + P N R L + +G +
Sbjct: 135 IMFQAS--NEYMLLLARLIYGFGSGLVVTYAPLYISETAPTNMRGLLNTLPQFNGSLGML 192
Query: 618 IAMPVSGVLAETA-MGWKLIFYATGGSMFV 704
++ + +++ T W+++ + FV
Sbjct: 193 LSYIMVFLMSLTLNPNWRIMLGSLSIPSFV 222
>11_06_0291 + 22008412-22012284
Length = 1290
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 116 KTQCFC*EIRLRHSSCTDDMHVFLHDSF 199
K QC +RLRH SCT+ M +F D F
Sbjct: 1188 KLQC----VRLRHISCTESMLIFKKDDF 1211
>06_03_1218 -
28488661-28488757,28488924-28488988,28489352-28489448,
28489647-28489852,28489853-28490152
Length = 254
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 127 TLSLPGSLRNILANFFSSTIFLSEPKIIK 41
+LSLP + NI +NFF TI +S +++K
Sbjct: 94 SLSLPLQVMNISSNFFHRTISISSTEMMK 122
>11_02_0063 + 7916048-7917135,7917225-7918690,7920177-7920238,
7921808-7922407
Length = 1071
Score = 28.3 bits (60), Expect = 6.7
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Frame = +3
Query: 111 PGRLSVSAKKFGFGIRHVQMICMSFCMIALYMARSSLGVAILAMTDVSRKNDTNVEVYNW 290
PG S A GF I + + SF + SSL VA + + ++R D + ++
Sbjct: 939 PGGYSSDAGNLGFPIMARKFVFQSFLIADTLAMCSSLVVAFICI--IARWEDLQF-LLHY 995
Query: 291 DKKTQGLILSSFFWGYMTMQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVAS-LGGW 467
T+ L+ F + T+ GL P LL + L VLLP + +G W
Sbjct: 996 RSFTKKLMW--FAYMATTVAFATGLYTVL---APRLLWLAIGICLLSVLLPAITKVIGEW 1050
Query: 468 PMICLCRVLMGLT 506
P++ L R +G T
Sbjct: 1051 PVLKL-RFRLGKT 1062
>01_06_0959 -
33362810-33363125,33363309-33363475,33363583-33364410,
33364483-33364719,33365455-33365871,33365951-33366412,
33367197-33367382
Length = 870
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 561 NERTTLAGVVYGGAQMGTIIAMPVSGVLAET 653
N L G V+G A T ++ P+SG +A T
Sbjct: 527 NGGNLLKGAVHGAAAFATGVSSPISGAIAST 557
>02_04_0121 -
19943988-19944251,19944534-19944734,19944802-19945124,
19945283-19945316,19945479-19945856,19946425-19946678,
19946791-19946938,19947052-19947198,19947287-19947664
Length = 708
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 438 LPTVASLGGWPMICLCRVLMGLTQACLFPASHTLLGRWL 554
LP + SL P+I LC +M + LFP S +G W+
Sbjct: 115 LPFLTSL---PVINLCAHVMAMAVQKLFPNSKVTIGPWI 150
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,250,547
Number of Sequences: 37544
Number of extensions: 505128
Number of successful extensions: 1458
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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