Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2j08
(727 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 2.2
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 23 3.9
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 5.1
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 5.1
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 22 5.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 5.1
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 6.8
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 6.8
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 6.8
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 6.8
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 9.0
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.4 bits (48), Expect = 2.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 551 TRNTLYFNTXYSNY*NHQKYYS 616
+ T++ N Y+NY N + YY+
Sbjct: 308 SNKTIHNNNNYNNYNNKKLYYN 329
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = -1
Query: 337 NVLNSLCNFFEMKFHIIKCRFGINQNLYGINNNPKIVLIQFIGKF 203
NV +C+ + ++F + ++GI QN +I ++ G F
Sbjct: 48 NVPTFMCHKYGLRFEEVSEKYGILQNWMDKFRGEEIAILYDPGMF 92
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 512 N*KYKSHIYSYNSTRNTLYFNTXYSNY*NHQKYYSTW 622
N KY S+ +YN+ N Y N Y+N N++K Y +
Sbjct: 88 NYKY-SNYNNYNNNYNNNY-NNNYNN--NYKKLYKNY 120
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 512 N*KYKSHIYSYNSTRNTLYFNTXYSNY*NHQKYYSTW 622
N KY S+ +YN+ N Y N Y+N N++K Y +
Sbjct: 88 NYKY-SNYNNYNNNYNNNY-NNNYNN--NYKKLYKNY 120
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 539 SYNSTRNTLYFNTXYSNY 592
S+ T N YF+ Y NY
Sbjct: 209 SWRITHNFFYFDPRYGNY 226
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 5.1
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +2
Query: 521 YKSHIYSYNSTRNTLYFNTXYSNY*NHQK--YYSTWN 625
+ ++ Y YN N N +NY N+ K YY+ N
Sbjct: 324 HNNNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYNIIN 360
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 512 N*KYKSHIYSYNSTRNTLYFNTXY 583
N KY + +YN+ LY+N Y
Sbjct: 95 NYKYNYNNNNYNNNCKKLYYNINY 118
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 512 N*KYKSHIYSYNSTRNTLYFNTXY 583
N KY + +YN+ LY+N Y
Sbjct: 95 NYKYNYNNNNYNNNCKKLYYNINY 118
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 512 N*KYKSHIYSYNSTRNTLYFNTXY 583
N KY + +YN+ LY+N Y
Sbjct: 95 NYKYNYNNNNYNNNCKKLYYNINY 118
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 512 N*KYKSHIYSYNSTRNTLYFNTXY 583
N KY + +YN+ LY+N Y
Sbjct: 95 NYKYNYNNNNYNNNCKKLYYNINY 118
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 557 NTLYFNTXYSNY*NHQKYYST 619
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 557 NTLYFNTXYSNY*NHQKYYST 619
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 557 NTLYFNTXYSNY*NHQKYYST 619
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 557 NTLYFNTXYSNY*NHQKYYST 619
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 557 NTLYFNTXYSNY*NHQKYYST 619
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 557 NTLYFNTXYSNY*NHQKYYST 619
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 557 NTLYFNTXYSNY*NHQKYYST 619
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 536 YSYNSTRNTLYFNTXY 583
Y+YN+ LY+N Y
Sbjct: 98 YNYNNNCKKLYYNINY 113
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,914
Number of Sequences: 438
Number of extensions: 2099
Number of successful extensions: 23
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -