Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2j07
(714 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 38 0.006
09_04_0559 + 18516732-18516746,18516893-18517330 36 0.042
10_08_0015 + 14116129-14116691,14116810-14117128,14117588-141186... 33 0.30
03_05_0478 - 24712157-24712177,24712206-24712260,24712377-247124... 31 0.91
12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775 30 1.6
02_04_0143 + 20172128-20172355,20172452-20173174 30 1.6
11_01_0612 + 4902197-4902929,4903443-4904071 30 2.1
07_03_0873 + 22194172-22195434,22195534-22195670,22197531-221976... 30 2.1
04_04_1592 - 34649484-34649547,34650118-34650186,34650325-346504... 30 2.1
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 30 2.1
07_01_0513 + 3828196-3828309,3828408-3828722,3828823-3828879,382... 29 2.8
05_04_0395 - 20921606-20921869,20921971-20922112,20922206-209223... 29 2.8
08_02_1031 - 23796755-23797171,23797243-23797595,23797676-23797715 29 3.7
03_06_0157 - 32039020-32039175,32039267-32039338,32039478-320396... 29 3.7
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 29 3.7
02_01_0201 - 1347868-1347925,1348040-1348135,1348447-1348523,134... 29 3.7
08_02_1167 + 24847689-24848156 29 4.8
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 29 4.8
05_03_0066 + 7980038-7981468 29 4.8
07_03_1158 - 24424060-24424461 28 6.4
01_06_0599 - 30513858-30514079,30514157-30514588,30514683-30514823 28 6.4
11_01_0768 - 6442332-6443792 28 8.5
09_04_0247 + 16030543-16031324,16032812-16033088,16033374-160335... 28 8.5
07_03_1107 - 24024387-24024497,24025799-24026410 28 8.5
06_03_0854 + 25400855-25403741,25406174-25407708 28 8.5
>01_06_1519 +
37942389-37943702,37944142-37944266,37944358-37944499,
37944602-37944848,37946139-37946196,37947629-37947913,
37947988-37948120
Length = 767
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +3
Query: 423 SEIPDAEAKSADIKVEEP---AAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
+E P AEA S + K EEP AA E +K E +A A ++E KP+ + E
Sbjct: 167 TEEPKAEASSEEAKTEEPKAEAAADEPAKEESKAEAAP-AEEAKPAEPEPEEKTVVVTEE 225
Query: 594 PNMVKKIDLAPTVESDAAAIPEIKTPEAADAPK 692
K ++ AAA P E A AP+
Sbjct: 226 EAATKTVEAIEETVVPAAAAPAAAATEEAAAPE 258
>09_04_0559 + 18516732-18516746,18516893-18517330
Length = 150
Score = 35.5 bits (78), Expect = 0.042
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPA-----------AQPEDSKTEVQATVAEISKEEKPSATD 560
A + E AEA+ A+ K EPA A+PE ++ E + E++ E +A
Sbjct: 44 AVAEEAAPAEAEVAETKEAEPAAAEPAAEEVKEAEPEPAEPEAEPAKEEVAPEPAAAAEA 103
Query: 561 AEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAA 680
A+ AA + VK+ + AP A A E+K EAA
Sbjct: 104 EAKEAEPAAQVAEEVKEEEAAP-----APAAEEVKVEEAA 138
>10_08_0015 +
14116129-14116691,14116810-14117128,14117588-14118664,
14118754-14119056
Length = 753
Score = 32.7 bits (71), Expect = 0.30
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 435 DAEAKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 611
+++ S D ++ A +P D +TE++ TV ++ E + G D+ + +
Sbjct: 32 ESQGPSGDQTLDSDVANEPNDGETEIETTVDDVLSESTHEQVENHGDGDN---VDDSSVH 88
Query: 612 IDLAPTVESDAAAIPEIKTPEAADA 686
IDL SD A PEI P D+
Sbjct: 89 IDLD---SSDTAFQPEIFDPRCWDS 110
>03_05_0478 -
24712157-24712177,24712206-24712260,24712377-24712473,
24712558-24713302,24713822-24714189,24714279-24714419,
24715480-24715849
Length = 598
Score = 31.1 bits (67), Expect = 0.91
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +3
Query: 420 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 599
SS P AE +A AA S A A+ S E P A++ + S +IP
Sbjct: 29 SSSAPPAEPPAAAAAAVAAAAAAASSAAAAAAQ-AQASSEGSPPASELSPGSLSPVMIPP 87
Query: 600 MVKKIDLAPTVESDAAAIPEIKTPEA-ADAPKLAD 701
LAP S AA+ E+ E+ + AP A+
Sbjct: 88 PRHADHLAPGSPSPAASPSELGDDESWSRAPSAAE 122
>12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775
Length = 1123
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/98 (22%), Positives = 43/98 (43%)
Frame = +3
Query: 420 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 599
SS + + + D K+ EP A ++TE++ +E S +P T+A + A++
Sbjct: 451 SSVVISEDDSTVDGKLVEPTASVSATETEIKEDSSEGSVTTEP--TEAASTEFVTAVVEE 508
Query: 600 MVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVD 713
T E D+ ++ P A+ + A++ D
Sbjct: 509 SAPTASSVETSEDDSTVDDKLVEPTASVSATEAESKED 546
>02_04_0143 + 20172128-20172355,20172452-20173174
Length = 316
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +3
Query: 438 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 617
+E ++ + E AA+PE ++ E+++EEK D+ A +A+ P+ D
Sbjct: 233 SEQETTGEEAEAAAAEPEAAQEGGGGGAQEVAEEEKRVDPDSVQVAAAASSTPSPPSSAD 292
Query: 618 LAPTVESDAAAIPEIKTPEAAD 683
+S A ++ P A D
Sbjct: 293 DDEEEKSKEEAAADVSAPAAPD 314
>11_01_0612 + 4902197-4902929,4903443-4904071
Length = 453
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +3
Query: 579 SAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLAD 701
+AA PN V ID+ AAA P + PEAA P L D
Sbjct: 25 AAAAAPNQVA-IDVVVVHHHGAAAAPGQQAPEAAPVPHLLD 64
>07_03_0873 +
22194172-22195434,22195534-22195670,22197531-22197639,
22197739-22197865,22197952-22198012,22199332-22199722
Length = 695
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE-GSADSAA 587
AK ++E ++ D++ +E A + E+ + E +A E E+K DAE G+A+ A
Sbjct: 63 AKEEGASESEGEAMDVEAKESADEKEEEEAEAEADGDE--GEDKSDEMDAEAGAAEEEA 119
>04_04_1592 -
34649484-34649547,34650118-34650186,34650325-34650444,
34650630-34650742,34650824-34650898,34651224-34651346,
34651427-34651446,34652354-34652410,34652922-34653860,
34653961-34654189,34654296-34654439,34654527-34654601,
34655363-34655433,34656103-34656205,34656407-34656633,
34656791-34656908,34657239-34657369,34657709-34657802
Length = 923
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +3
Query: 441 EAKSADIKVEEPAAQPEDSKTEVQATVAEI-SKEEK--PSATDA-EGSADSAAIIPNMVK 608
E++ V AA S+ EV A + SK + SATD+ + SAD A ++P
Sbjct: 552 ESRKESTDVASAAAPKTSSRMEVAPDSAPLLSKAGRRVESATDSRKESADVAPVVPRTTS 611
Query: 609 KIDLAPTVESDAAA 650
++++AP + +A
Sbjct: 612 RMEMAPDSRREISA 625
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Frame = +3
Query: 309 PAIPEAKK--------DDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIK 464
P IPE+K+ + +P++ DI +S +P++ + + DIK
Sbjct: 1272 PQIPESKELSQQSKILPESSPDNHDIKCEYSSPTPIPESKELSLQSKILPESSSDNQDIK 1331
Query: 465 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
E+P+ P EV + ++I E D E S+ +I
Sbjct: 1332 CEDPSPTPISKSKEV-SPQSKILSESYLDNQDVERECPSSILI 1373
>07_01_0513 +
3828196-3828309,3828408-3828722,3828823-3828879,
3829668-3829826,3829918-3830028,3830173-3830259,
3830359-3830591,3830808-3830886,3831173-3831316,
3831529-3831568,3831667-3831729,3832193-3832224,
3832320-3832361,3832444-3832557
Length = 529
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Frame = +3
Query: 441 EAKSADIKVEEPAAQPEDSKTE--VQATVAEISK--EEKPSAT 557
E++S DIK + +AQP +K E VQAT++ + K EEK T
Sbjct: 394 ESQSEDIKPADSSAQPISAKKEPLVQATLSSMFKKAEEKKRCT 436
>05_04_0395 -
20921606-20921869,20921971-20922112,20922206-20922330,
20922758-20923984
Length = 585
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAA 587
A ++E P AEA++ E AA E+ KTE T E +KEE+P A A + + A
Sbjct: 133 APAAEEPKAEAEA-----EAEAAATEEPKTEEPKT-EEPAKEEEPKAAAAAAAEEPKA 184
>08_02_1031 - 23796755-23797171,23797243-23797595,23797676-23797715
Length = 269
Score = 29.1 bits (62), Expect = 3.7
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +3
Query: 435 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI 614
D +A A+IK + ED+ A+ + + +EE P+A+DA+ A A P +
Sbjct: 124 DKDALLAEIKELKGKLGDEDAA----ASFSSVKEEEDPAASDADPPATGA---PQGSSES 176
Query: 615 DLAPTVESDAAAIPEIKTPEAA 680
D + V +DA +P P AA
Sbjct: 177 D-SSAVLNDAEILPHKPAPAAA 197
>03_06_0157 -
32039020-32039175,32039267-32039338,32039478-32039602,
32039678-32040559,32040623-32040692,32041248-32041739,
32041985-32042044,32042541-32042618,32043322-32044344
Length = 985
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 444 AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
A+ D E+ E+ + EVQ V E +P DAEG+A A ++
Sbjct: 255 AQDGDDVEEQKGEGEEEMEEEVQVEVQEKRGRGRPRKADAEGNALQARVL 304
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 471 EPAAQPEDSKTEVQATVAEISKEEKPSATDAEG 569
EP A PE + + Q + +K+ PSA D +G
Sbjct: 132 EPPAPPEPKQQQQQQQAGDAAKQAAPSADDEDG 164
>02_01_0201 -
1347868-1347925,1348040-1348135,1348447-1348523,
1349385-1349453,1349576-1349629,1350295-1350350,
1350487-1350694,1350978-1351066,1351163-1351187
Length = 243
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 514 ACTSVFESSG*AAGSSTLISADFASASGISDDF 416
+CT +F+SS +A + ++A FA AS D+F
Sbjct: 64 SCTYIFDSSDASASGAADVAATFAKASRKMDEF 96
>08_02_1167 + 24847689-24848156
Length = 155
Score = 28.7 bits (61), Expect = 4.8
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEI---SKEEKPSAT-DAEGSADSA 584
+ E A A +A +VEE + + TVAE +KE +P+A +AE A++A
Sbjct: 36 EEEEATAAAAAAAAAQVEETKPADDQAAAAPAETVAEAEAEAKEAEPAAAEEAEPEAETA 95
Query: 585 --AIIPNMV--KKIDLAPTVESDAAAIPEIKTPEAADAP 689
A I + + P E++AAA P EAA AP
Sbjct: 96 PPAAIAEAEAGEAKEPEPEAEAEAAAAP---VEEAAAAP 131
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQA 515
AK E P+AEA++A VEE AA P + E +A
Sbjct: 108 AKEPE-PEAEAEAAAAPVEEAAAAPVEVAEEAEA 140
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Frame = +3
Query: 423 SEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKE--EKPSATDAEGSADSAAIIP 596
S + K DI + + P+D ++ + +KE EK A D + A+S +I
Sbjct: 464 SAVDKGTGKKQDITITGASTLPKDEVEKMVEEAEKFAKEDKEKRDAIDTKNQAES--VIY 521
Query: 597 NMVKKI-DLAPTVESDAAAIPEIKTPEAADA 686
K++ +L V D E K E DA
Sbjct: 522 QTEKQLKELGDKVPGDVKGKVEAKLTELKDA 552
>05_03_0066 + 7980038-7981468
Length = 476
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 596
K+ ++ D + K KVE + E SK E+ + E SKEE S A+SA+ +
Sbjct: 388 KAKKVLDRKLKEK--KVESNSTVTEKSK-ELTSRETEESKEELTSRKTDANDAESASSVA 444
Query: 597 NMVKK 611
+KK
Sbjct: 445 EAIKK 449
>07_03_1158 - 24424060-24424461
Length = 133
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +3
Query: 477 AAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIP 656
AA E+ + V EI K E P ++P + K +L E A+P
Sbjct: 39 AAAAEEEEHPAHPAVPEIPKPELPELPKVPELPHP--VVPELPKP-ELPKIPEVPHLAVP 95
Query: 657 EIKTPEAADAPK 692
E+ PE + PK
Sbjct: 96 ELPKPEVPEIPK 107
>01_06_0599 - 30513858-30514079,30514157-30514588,30514683-30514823
Length = 264
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 486 PEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAA 647
P K E VA + +E+ A D E D ++ +++K L P+VE DAA
Sbjct: 177 PTGDKVEFYG-VAVLKVDEQLRAEDVEVYYDPGELLGDLLKGPLLVPSVEKDAA 229
>11_01_0768 - 6442332-6443792
Length = 486
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
A + P AE+ +AD K PAA+ A KE P+A +A SAA
Sbjct: 292 ADKNAYPAAES-TAD-KETSPAAESTADTATSAAAGPTADKETSPAAESTADTATSAAAG 349
Query: 594 PNMVKKIDLA--PTVESDAAAI 653
K+ LA PT ++ +A+
Sbjct: 350 STADKETSLAAEPTADTATSAV 371
>09_04_0247 + 16030543-16031324,16032812-16033088,16033374-16033559,
16033714-16033866,16034277-16034702,16035922-16037668,
16037687-16038183,16038519-16038709,16038786-16038941,
16040077-16040311,16040416-16040723,16041279-16041439,
16041852-16041895,16041975-16042067
Length = 1751
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 435 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSA 584
D + K++ +K EE + SKTE A + KEEK A D+ +A++A
Sbjct: 1268 DPDFKNSYLKKEE-STDDASSKTEETTNNASLQKEEK--ANDSSKNAENA 1314
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/84 (26%), Positives = 31/84 (36%)
Frame = +3
Query: 447 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 626
K+ PA P S + A A + P+A+ +A + P + AP
Sbjct: 23 KATPTPAAAPATTPPASSKKTPAPAAAPTTTTPPAASTPPAAAPTTPATPAPAE----AP 78
Query: 627 TVESDAAAIPEIKTPEAADAPKLA 698
T + A P T A APK A
Sbjct: 79 TTPAPTKAPPTKSTKAPAPAPKAA 102
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +3
Query: 519 VAEISKEEKPSATDAEGSADSAAIIPN----MVKKIDLAPTVESDAAAIPEIKTPEAA 680
V + PSA A A + ++ PN V LAP + AAA P + P AA
Sbjct: 609 VVTVGAPPPPSAAPAPAPASAPSLEPNDIIAPVVSSTLAPGASAAAAAAPAVAPPAAA 666
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,206,218
Number of Sequences: 37544
Number of extensions: 230791
Number of successful extensions: 783
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -