Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2i24
(782 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase... 26 7.0
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 26 7.0
SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr... 25 9.3
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 25 9.3
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||... 25 9.3
SPAC25B8.16 |||RNase P and RNase MRP subunit |Schizosaccharomyce... 25 9.3
SPAC17G8.13c |mst2||histone acetyltransferase Mst2|Schizosacchar... 25 9.3
SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Sch... 25 9.3
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 25 9.3
SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces p... 25 9.3
>SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase
Gpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1448
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 100 VFTKEPMVNLDMKMKELCIMKLLDHILQPTMFEDIKEIAKEYNIE 234
+ TK + + D K+K +++ L P+ I IAK+YN E
Sbjct: 1174 IMTKSVIEHTDKKVK----FWFIENFLSPSFKSSIPAIAKKYNFE 1214
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 25.8 bits (54), Expect = 7.0
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +1
Query: 112 EPMVNLDMKMKE-LCIMKLLDHILQPTMFEDIKEIAKEY-NIEKSCDKYMN-----VDVV 270
+P+ +L +++KE L +K L Q E I + ++ N+ K K + +D+V
Sbjct: 298 QPLYDLTIQLKEELQSLKRLSSEQQNLQHEQILQWKSDFLNVSKDHLKVLQQLRPLIDIV 357
Query: 271 KQFMEMYKMGM 303
++FM +Y G+
Sbjct: 358 EKFMNVYFKGL 368
>SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 541
Score = 25.4 bits (53), Expect = 9.3
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 714 IGHNIVLG*RAADSLTPVN--HYQIVVSNRDAVVFPEDRV 601
IG IVL A + TP+ HY V + R+ V+ PEDR+
Sbjct: 374 IGIGIVL----AGACTPIIYVHYNRVYTRRNGVMSPEDRL 409
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 25.4 bits (53), Expect = 9.3
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -1
Query: 353 SSIWSSLVWTKVSPRGSMPILYISMNCLTTSTFMYLSQLFSMLY 222
SS +S ++T + + I Y+S+NCL + + L F + +
Sbjct: 314 SSSRNSWIFTLLLTFTQLTIFYLSLNCLIENPYRMLRNTFPIWF 357
>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 25.4 bits (53), Expect = 9.3
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 625 GITVTDDNLVVIDWRKGVRRSLSQNDVMSYFMEDV 729
G + T N ++DW + V+++ + D++ +ED+
Sbjct: 354 GTSATLFNSFLLDWNENVKKNDTYYDILHAILEDL 388
>SPAC25B8.16 |||RNase P and RNase MRP subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 698
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = +1
Query: 613 WKYY-GITVTDDNLVVIDWR 669
W Y GI V DD + + DWR
Sbjct: 317 WNYLSGIAVLDDRIAMHDWR 336
>SPAC17G8.13c |mst2||histone acetyltransferase
Mst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 25.4 bits (53), Expect = 9.3
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 214 AKEYNIEKSCDKYMNVDVVKQFMEMYKMGMLPRGETFVHTNELQMEE 354
AK I +SC KYMN D V Q +M P G+ + + E
Sbjct: 128 AKNLYICESCLKYMNSDHVLQRHKMKCSWSYPPGDEIYRDKNISIFE 174
>SPBC577.05c |rec27|mug41|meiotic recombination protein
Rec27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 134
Score = 25.4 bits (53), Expect = 9.3
Identities = 9/36 (25%), Positives = 22/36 (61%)
Frame = +1
Query: 121 VNLDMKMKELCIMKLLDHILQPTMFEDIKEIAKEYN 228
VNL K ++ ++++H+L+ ++I+ K+Y+
Sbjct: 12 VNLKKKQLQITSSEIIEHVLEELNLKNIERRVKKYD 47
>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 673
Score = 25.4 bits (53), Expect = 9.3
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 625 GITVTDDNLVVIDWRKGVRRSLSQNDVMSYFMEDV 729
G + T N ++DW + V+++ + D++ +ED+
Sbjct: 354 GTSATLFNSFLLDWNENVKKNDTYYDILHAILEDL 388
>SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 9.3
Identities = 16/70 (22%), Positives = 30/70 (42%)
Frame = -3
Query: 606 RVLGGFSHLHHKGFTDDMAVNEEVGIDLVRSGQVETLAVGSVEARGSKSVDEHASVDPFS 427
++LGG SH+ D AV +E + L ET+ S++ + + P +
Sbjct: 264 QILGGHSHIR------DFAVYDEASVSLEGGRYCETVGWLSIDGLSASNATRQYVGRPVT 317
Query: 426 HPARSPHENI 397
+ R + N+
Sbjct: 318 NETRQSYPNL 327
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,856,933
Number of Sequences: 5004
Number of extensions: 55733
Number of successful extensions: 179
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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