Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2i22
         (554 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30670-1|CAA83150.1|   88|Homo sapiens Ig heavy chain (VH4) V re...    29   8.3  
DQ524138-1|ABI35650.1|  120|Homo sapiens immunoglobulin heavy ch...    29   8.3  

>Z30670-1|CAA83150.1|   88|Homo sapiens Ig heavy chain (VH4) V
           region (VDJ) protein.
          Length = 88

 Score = 29.5 bits (63), Expect = 8.3
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 242 GITNTGPS-KSSASLNLTPDGNHDSLRTSGV*LSDLRLKATLRVEHFDAFDKNG 400
           G TN  PS +S  +++L    N  SLR S V  +D  +       H DAFD  G
Sbjct: 26  GSTNYNPSLQSRVTISLDTSKNQFSLRLSSVTAADTAVYYCAGSAHSDAFDMWG 79


>DQ524138-1|ABI35650.1|  120|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 120

 Score = 29.5 bits (63), Expect = 8.3
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 242 GITNTGPS-KSSASLNLTPDGNHDSLRTSGV*LSDLRLKATLRVEH 376
           G TN  PS KS  ++++    NH SL  S V  +D  +   +R EH
Sbjct: 55  GSTNYNPSLKSRVTISVDKSKNHFSLNLSSVTAADTAVYYCVRAEH 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,330,613
Number of Sequences: 237096
Number of extensions: 1431829
Number of successful extensions: 2393
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2393
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)