Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2i15
(372 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 1.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 1.2
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 2.7
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 2.7
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 21 3.5
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 3.5
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 4.7
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 4.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 6.2
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 20 8.2
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 20 8.2
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 20 8.2
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 1.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 55 KICLLVLTLGYIHISVSIICNA 120
++CL+V TL + ++ I+C A
Sbjct: 434 RLCLIVFTLFTVLATIVILCRA 455
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 1.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 55 KICLLVLTLGYIHISVSIICNA 120
++CL+V TL + ++ I+C A
Sbjct: 434 RLCLIVFTLFTVLATIVILCRA 455
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 1.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 55 KICLLVLTLGYIHISVSIICNA 120
++CL+V TL + ++ I+C A
Sbjct: 434 RLCLIVFTLFTVLATIVILCRA 455
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 1.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 55 KICLLVLTLGYIHISVSIICNA 120
++CL+V TL + ++ I+C A
Sbjct: 434 RLCLIVFTLFTVLATIVILCRA 455
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 1.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 55 KICLLVLTLGYIHISVSIICNA 120
++CL+V TL + ++ I+C A
Sbjct: 434 RLCLIVFTLFTVLATIVILCRA 455
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 1.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 55 KICLLVLTLGYIHISVSIICNA 120
++CL+V TL + ++ I+C A
Sbjct: 434 RLCLIVFTLFTVLATIVILCRA 455
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 1.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 55 KICLLVLTLGYIHISVSIICNA 120
++CL+V TL + ++ I+C A
Sbjct: 502 RLCLIVFTLFTVLATIVILCRA 523
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 1.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 55 KICLLVLTLGYIHISVSIICNA 120
++CL+V TL + ++ I+C A
Sbjct: 502 RLCLIVFTLFTVLATIVILCRA 523
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 2.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 369 FFCFSIT*YIFYVHFS 322
F CF++ +I Y+H S
Sbjct: 416 FVCFNLMYWIIYLHIS 431
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 2.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 369 FFCFSIT*YIFYVHFS 322
F CF++ +I Y+H S
Sbjct: 416 FVCFNLMYWIIYLHIS 431
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 21.4 bits (43), Expect = 3.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -1
Query: 168 LNWMPYFTIY 139
L W+P+FT+Y
Sbjct: 20 LCWLPFFTMY 29
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 3.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -1
Query: 168 LNWMPYFTIY 139
L W+P+FT+Y
Sbjct: 468 LCWLPFFTMY 477
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.0 bits (42), Expect = 4.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 165 LNLRNRLMKLSGTNFNF 215
L L NR+ K+ +FNF
Sbjct: 382 LALSNRMQKIINNDFNF 398
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.0 bits (42), Expect = 4.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 165 LNLRNRLMKLSGTNFNF 215
L L NR+ K+ +FNF
Sbjct: 380 LALSNRMQKIVNNDFNF 396
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 20.6 bits (41), Expect = 6.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 248 ARTIPVHSTYQKIKI 204
A IPVH+T +K I
Sbjct: 439 ASNIPVHATLEKFMI 453
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 20.2 bits (40), Expect = 8.2
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 171 DLNWMPYFTIY 139
DLNW P T Y
Sbjct: 106 DLNWQPIATKY 116
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 20.2 bits (40), Expect = 8.2
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 171 DLNWMPYFTIY 139
DLNW P T Y
Sbjct: 121 DLNWQPIATKY 131
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 20.2 bits (40), Expect = 8.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 165 LNLRNRLMKLSGTNFNF 215
L L NR+ K+ +FNF
Sbjct: 377 LVLSNRMQKIVNDDFNF 393
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,203
Number of Sequences: 438
Number of extensions: 1891
Number of successful extensions: 21
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8928360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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