Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2i09
         (545 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001833-1|AAN71588.1|  263|Drosophila melanogaster RH48616p pro...    29   3.1  
AE014296-1181|AAF50619.1|  263|Drosophila melanogaster CG14823-P...    29   3.1  

>BT001833-1|AAN71588.1|  263|Drosophila melanogaster RH48616p
           protein.
          Length = 263

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
 Frame = +1

Query: 184 LSDLPQDIILEE---IVSQIAVENGQS-ITIFI---SRDPEPTLKVIVPQNATVRDLKKA 342
           L D  Q  +LEE   +V+   V+   S IT F    +  PEP+ K +     T  D   A
Sbjct: 93  LKDRGQVEVLEEDFPMVTAAGVDAQTSTITTFQPPPTSSPEPSAKCLDCMATTATDNIPA 152

Query: 343 TARHFELQQKRTGLKVKISWKYIWKTYHLAYDSL-ILDNDDQCIEDYGVC 489
             RH    ++  G+  +IS  Y W+      D+L I+D DD    DYG C
Sbjct: 153 ICRHRGRPEEPCGI-YRISHVY-WQ------DALRIIDPDDSLARDYGRC 194


>AE014296-1181|AAF50619.1|  263|Drosophila melanogaster CG14823-PA,
           isoform A protein.
          Length = 263

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
 Frame = +1

Query: 184 LSDLPQDIILEE---IVSQIAVENGQS-ITIFI---SRDPEPTLKVIVPQNATVRDLKKA 342
           L D  Q  +LEE   +V+   V+   S IT F    +  PEP+ K +     T  D   A
Sbjct: 93  LKDRGQVEVLEEDFPMVTAAGVDAQTSTITTFQPPPTSSPEPSAKCLDCMATTATDNIPA 152

Query: 343 TARHFELQQKRTGLKVKISWKYIWKTYHLAYDSL-ILDNDDQCIEDYGVC 489
             RH    ++  G+  +IS  Y W+      D+L I+D DD    DYG C
Sbjct: 153 ICRHRGRPEEPCGI-YRISHVY-WQ------DALRIIDPDDSLARDYGRC 194


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,105,013
Number of Sequences: 53049
Number of extensions: 373723
Number of successful extensions: 942
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)