Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2i08
         (795 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...   112   4e-27
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.          112   4e-27
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    64   1e-12
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    64   1e-12
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        61   1e-11
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           53   3e-09

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score =  112 bits (269), Expect = 4e-27
 Identities = 72/168 (42%), Positives = 93/168 (55%), Gaps = 12/168 (7%)
 Frame = +2

Query: 326 QPAPEVVIEQGILSG--KISPDGSFFE-YVGIPYATSNINT-RFKAPLPPPSWNGVFKAV 493
           + AP V    G + G  KIS +G  +E Y GIPYA   +   RFKAP   P+W G   A 
Sbjct: 20  EDAPRVKTPLGAIKGYYKISGNGKQYEAYEGIPYALPPVGKFRFKAPQKIPAWIGELSAT 79

Query: 494 EETSMCPQASIIG------IIGSEDCLTINVYIPA--LARKPLPVMVYVHGGAFVLGSGG 649
           +    C Q + +       I G+EDCL +NVY+PA     + LPV+ ++HGGAF  GSG 
Sbjct: 80  KFGFPCLQYTQLPVNPRDKIEGAEDCLYLNVYVPADRTPSQSLPVIFWIHGGAFQFGSG- 138

Query: 650 KLLYAPDFLVKHDVILVTFNYRLGALGFMCLGIKDAPGNAGLKDQIAA 793
            +     +L+  DVI VT NYRLG LGF+    +  PGN GLKDQ  A
Sbjct: 139 -IPMGAKYLMDSDVIFVTINYRLGILGFLSTEDEVVPGNMGLKDQSMA 185


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score =  112 bits (269), Expect = 4e-27
 Identities = 72/168 (42%), Positives = 93/168 (55%), Gaps = 12/168 (7%)
 Frame = +2

Query: 326 QPAPEVVIEQGILSG--KISPDGSFFE-YVGIPYATSNINT-RFKAPLPPPSWNGVFKAV 493
           + AP V    G + G  KIS +G  +E Y GIPYA   +   RFKAP   P+W G   A 
Sbjct: 20  EDAPRVKTPLGAIKGYYKISGNGKQYEAYEGIPYALPPVGKFRFKAPQKIPAWIGELSAT 79

Query: 494 EETSMCPQASIIG------IIGSEDCLTINVYIPA--LARKPLPVMVYVHGGAFVLGSGG 649
           +    C Q + +       I G+EDCL +NVY+PA     + LPV+ ++HGGAF  GSG 
Sbjct: 80  KFGFPCLQYTQLPVNPRDKIEGAEDCLYLNVYVPADRTPSQSLPVIFWIHGGAFQFGSG- 138

Query: 650 KLLYAPDFLVKHDVILVTFNYRLGALGFMCLGIKDAPGNAGLKDQIAA 793
            +     +L+  DVI VT NYRLG LGF+    +  PGN GLKDQ  A
Sbjct: 139 -IPMGAKYLMDSDVIFVTINYRLGILGFLSTEDEVVPGNMGLKDQSMA 185


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 64.5 bits (150), Expect = 1e-12
 Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 37/168 (22%)
 Frame = +2

Query: 401 YVGIPYATSNINT-RFKAPLPPPSWNGVFKAVEETSMCPQAS---IIGIIG--------- 541
           + GIP+A   I   RF+ PLP   W+GV  A    + C Q       G  G         
Sbjct: 62  FYGIPFAKPPIGPLRFRKPLPIEPWHGVLNATVLPNSCYQERYEYFPGFPGEEMWNPNTN 121

Query: 542 -SEDCLTINVYIPALAR-------KP----------LPVMVYVHGGAFVLGSGGKLLYAP 667
            SEDCL +N+++P   R        P          LP++V+++GG F+ G+    +Y  
Sbjct: 122 ISEDCLYLNIWVPQKYRLRHKGDGSPGGNGGPRNGLLPLLVWIYGGGFMSGTATLDVYNA 181

Query: 668 DFL-VKHDVILVTFNYRLGALGFMCL-----GIKDAPGNAGLKDQIAA 793
           D +    +VI+ +  YR+GA GF+ L       ++APGN GL DQ  A
Sbjct: 182 DIMAATSNVIIASMQYRVGAFGFLYLNKHFTNSEEAPGNMGLWDQALA 229


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 64.5 bits (150), Expect = 1e-12
 Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 37/168 (22%)
 Frame = +2

Query: 401 YVGIPYATSNINT-RFKAPLPPPSWNGVFKAVEETSMCPQAS---IIGIIG--------- 541
           + GIP+A   I   RF+ PLP   W+GV  A    + C Q       G  G         
Sbjct: 62  FYGIPFAKPPIGPLRFRKPLPIEPWHGVLNATVLPNSCYQERYEYFPGFPGEEMWNPNTN 121

Query: 542 -SEDCLTINVYIPALAR-------KP----------LPVMVYVHGGAFVLGSGGKLLYAP 667
            SEDCL +N+++P   R        P          LP++V+++GG F+ G+    +Y  
Sbjct: 122 ISEDCLYLNIWVPQKYRLRHKGDGSPGGNGGPRNGLLPLLVWIYGGGFMSGTATLDVYNA 181

Query: 668 DFL-VKHDVILVTFNYRLGALGFMCL-----GIKDAPGNAGLKDQIAA 793
           D +    +VI+ +  YR+GA GF+ L       ++APGN GL DQ  A
Sbjct: 182 DIMAATSNVIIASMQYRVGAFGFLYLNKHFTNSEEAPGNMGLWDQALA 229


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 61.3 bits (142), Expect = 1e-11
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = +2

Query: 542 SEDCLTINVYIPALARKPLPVMVYVHGGAFVLGSGGKLLYAPDFLVKHDVILVTFNYRLG 721
           +EDCL ++VY  +L +   PVM YVH GAF+ G+       PD+L+  DV++V+ NYR+G
Sbjct: 1   TEDCLYLDVYTNSLDQSK-PVMFYVHEGAFISGTSSFHEMRPDYLLPKDVVVVSSNYRVG 59

Query: 722 ALG 730
           A G
Sbjct: 60  AFG 62


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 53.2 bits (122), Expect = 3e-09
 Identities = 29/56 (51%), Positives = 34/56 (60%)
 Frame = +2

Query: 626 AFVLGSGGKLLYAPDFLVKHDVILVTFNYRLGALGFMCLGIKDAPGNAGLKDQIAA 793
           AF LGSG  +     +L+  DVI VT NYRLG LGF+    +  PGN GLKDQ  A
Sbjct: 3   AFQLGSGTPM--GAKYLMDSDVIFVTINYRLGILGFLSTEDEVVPGNMGLKDQSMA 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,642
Number of Sequences: 438
Number of extensions: 4754
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)