Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2h13
         (705 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062370-1|AAH62370.1|  125|Homo sapiens brain protein I3 protein.     63   1e-09
BC018737-1|AAH18737.1|  125|Homo sapiens brain protein I3 protein.     63   1e-09
AF106966-1|AAD05167.1|  125|Homo sapiens I3 protein protein.           63   1e-09
AF041430-1|AAF18565.2|  125|Homo sapiens pRGR2 protein.                63   1e-09
AB055977-1|BAB32785.1|  125|Homo sapiens I3 protein protein.           63   1e-09
AK125511-1|BAC86188.1|  559|Homo sapiens rome) (ELN).  protein.        30   7.0  

>BC062370-1|AAH62370.1|  125|Homo sapiens brain protein I3 protein.
          Length = 125

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = +1

Query: 589 VGACPACRVGILEDDFTCLGILCAILFFPLGILCCLALK 705
           VG CP CRVG+LED FT LGI  AI+ FP G +CC AL+
Sbjct: 75  VGGCPVCRVGVLEDCFTFLGIFLAIILFPFGFICCFALR 113


>BC018737-1|AAH18737.1|  125|Homo sapiens brain protein I3 protein.
          Length = 125

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = +1

Query: 589 VGACPACRVGILEDDFTCLGILCAILFFPLGILCCLALK 705
           VG CP CRVG+LED FT LGI  AI+ FP G +CC AL+
Sbjct: 75  VGGCPVCRVGVLEDCFTFLGIFLAIILFPFGFICCFALR 113


>AF106966-1|AAD05167.1|  125|Homo sapiens I3 protein protein.
          Length = 125

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = +1

Query: 589 VGACPACRVGILEDDFTCLGILCAILFFPLGILCCLALK 705
           VG CP CRVG+LED FT LGI  AI+ FP G +CC AL+
Sbjct: 75  VGGCPVCRVGVLEDCFTFLGIFLAIILFPFGFICCFALR 113


>AF041430-1|AAF18565.2|  125|Homo sapiens pRGR2 protein.
          Length = 125

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = +1

Query: 589 VGACPACRVGILEDDFTCLGILCAILFFPLGILCCLALK 705
           VG CP CRVG+LED FT LGI  AI+ FP G +CC AL+
Sbjct: 75  VGGCPVCRVGVLEDCFTFLGIFLAIILFPFGFICCFALR 113


>AB055977-1|BAB32785.1|  125|Homo sapiens I3 protein protein.
          Length = 125

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = +1

Query: 589 VGACPACRVGILEDDFTCLGILCAILFFPLGILCCLALK 705
           VG CP CRVG+LED FT LGI  AI+ FP G +CC AL+
Sbjct: 75  VGGCPVCRVGVLEDCFTFLGIFLAIILFPFGFICCFALR 113


>AK125511-1|BAC86188.1|  559|Homo sapiens rome) (ELN).  protein.
          Length = 559

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
 Frame = -1

Query: 558 CGSVAWYKACLWRRSTIWTIARRWWGKR-CTW------RIRCLWVCMRLKPGSEFS 412
           CGS +W  +  WR S  W  + RW G R   W      +IRC   C    P   ++
Sbjct: 466 CGSWSWLGSWSWRGSWSWCGSWRWRGSRHWPWWSCSCSKIRCQGGCQSPAPSCSWA 521


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,389,466
Number of Sequences: 237096
Number of extensions: 2400338
Number of successful extensions: 10236
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10208
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)