Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2h13
         (705 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025823-1|ABF85723.1|   81|Drosophila melanogaster IP05417p pro...    69   5e-12
AE014296-657|AAF47770.2|  122|Drosophila melanogaster CG12012-PA...    69   5e-12
EF057934-1|ABL84869.1|  668|Drosophila melanogaster Nup75 protein.     29   8.1  
BT025193-1|ABF17884.1|  837|Drosophila melanogaster FI01127p pro...    29   8.1  
BT015953-1|AAV36838.1|  837|Drosophila melanogaster SD09647p pro...    29   8.1  
AY070708-1|AAL48179.1|  725|Drosophila melanogaster SD01032p pro...    29   8.1  
AY061138-1|AAL28686.1|  142|Drosophila melanogaster LD11861p pro...    29   8.1  
AE014298-753|AAF46044.1|  837|Drosophila melanogaster CG4136-PA ...    29   8.1  

>BT025823-1|ABF85723.1|   81|Drosophila melanogaster IP05417p
           protein.
          Length = 81

 Score = 69.3 bits (162), Expect = 5e-12
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = +1

Query: 589 VGACPACRVGILEDDFTCLGILCAILFFPLGILCCLALK 705
           +G CPACR+G LED F+  G+ CAI FFPLGILCCLA++
Sbjct: 32  IGGCPACRIGYLEDTFSACGLCCAIFFFPLGILCCLAMR 70


>AE014296-657|AAF47770.2|  122|Drosophila melanogaster CG12012-PA
           protein.
          Length = 122

 Score = 69.3 bits (162), Expect = 5e-12
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = +1

Query: 589 VGACPACRVGILEDDFTCLGILCAILFFPLGILCCLALK 705
           +G CPACR+G LED F+  G+ CAI FFPLGILCCLA++
Sbjct: 73  IGGCPACRIGYLEDTFSACGLCCAIFFFPLGILCCLAMR 111


>EF057934-1|ABL84869.1|  668|Drosophila melanogaster Nup75 protein.
          Length = 668

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -2

Query: 665 RMAHKIPRHVKSSSK-MPTRHAGQAPTVI 582
           R+A    RHVK SS+  PT +AGQ P +I
Sbjct: 32  RIALSAYRHVKHSSRDEPTENAGQVPVLI 60


>BT025193-1|ABF17884.1|  837|Drosophila melanogaster FI01127p
           protein.
          Length = 837

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +2

Query: 443 HTHRHLIRQVHLFPH-HLRAIVHMVLLLHKQALYQATEPQTL*YHQL 580
           H H H   + H   H H +A  H  +LLH Q   Q  + Q   +H L
Sbjct: 565 HHHHHHHHKGHHHAHVHAQAQAHAHMLLHHQQQQQQQQQQQQHHHHL 611


>BT015953-1|AAV36838.1|  837|Drosophila melanogaster SD09647p
           protein.
          Length = 837

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +2

Query: 443 HTHRHLIRQVHLFPH-HLRAIVHMVLLLHKQALYQATEPQTL*YHQL 580
           H H H   + H   H H +A  H  +LLH Q   Q  + Q   +H L
Sbjct: 565 HHHHHHHHKGHHHAHVHAQAQAHAHMLLHHQQQQQQQQQQQQHHHHL 611


>AY070708-1|AAL48179.1|  725|Drosophila melanogaster SD01032p
           protein.
          Length = 725

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +2

Query: 443 HTHRHLIRQVHLFPH-HLRAIVHMVLLLHKQALYQATEPQTL*YHQL 580
           H H H   + H   H H +A  H  +LLH Q   Q  + Q   +H L
Sbjct: 453 HHHHHHHHKGHHHAHVHAQAQAHAHMLLHHQQQQQQQQQQQQHHHHL 499


>AY061138-1|AAL28686.1|  142|Drosophila melanogaster LD11861p
           protein.
          Length = 142

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = -1

Query: 573 WYYNVCGSVAWYKACLWRRSTIWTIARRWWGKRCTWRIRCLW 448
           W + VC S A   +C W    +      WW ++  W    LW
Sbjct: 92  WLF-VCPSSAVLSSCFWLALLVLFAFSIWWDEKFHWNWILLW 132


>AE014298-753|AAF46044.1|  837|Drosophila melanogaster CG4136-PA
           protein.
          Length = 837

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +2

Query: 443 HTHRHLIRQVHLFPH-HLRAIVHMVLLLHKQALYQATEPQTL*YHQL 580
           H H H   + H   H H +A  H  +LLH Q   Q  + Q   +H L
Sbjct: 565 HHHHHHHHKGHHHAHVHAQAQAHAHMLLHHQQQQQQQQQQQQHHHHL 611


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,517,317
Number of Sequences: 53049
Number of extensions: 731599
Number of successful extensions: 2910
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2890
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)