Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2h12
(723 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075505-1|AAL68314.1| 182|Drosophila melanogaster RE53508p pro... 156 3e-38
AY060871-1|AAL28419.1| 182|Drosophila melanogaster GM03767p pro... 156 3e-38
AE014296-1546|AAF50348.1| 182|Drosophila melanogaster CG5012-PA... 156 3e-38
DQ138692-1|ABA86298.1| 169|Drosophila melanogaster CG5012 protein. 145 5e-35
AY061107-1|AAL28655.1| 595|Drosophila melanogaster LD09531p pro... 34 0.23
AF219009-1|AAF27644.1| 595|Drosophila melanogaster multi-sex-co... 34 0.23
AE014298-1312|AAF46473.1| 595|Drosophila melanogaster CG12058-P... 34 0.23
AE014134-3185|AAF53863.1| 470|Drosophila melanogaster CG13966-P... 30 3.7
AY061272-1|AAL28820.1| 707|Drosophila melanogaster LD19634p pro... 29 8.5
AE014296-2322|AAF49789.1| 952|Drosophila melanogaster CG8833-PA... 29 8.5
>AY075505-1|AAL68314.1| 182|Drosophila melanogaster RE53508p
protein.
Length = 182
Score = 156 bits (378), Expect = 3e-38
Identities = 85/147 (57%), Positives = 98/147 (66%), Gaps = 1/147 (0%)
Frame = +3
Query: 201 LTIPVPEGVDKPVSPKIEKIVFEITNLNLLEVSELSQVLKKRLNLPDXXXXXXXXXXXXX 380
L P PEG KP +PK++ IV I LNLLEV+ELS +LK++LNLP+
Sbjct: 36 LVPPAPEGAAKPPNPKLDSIVNNIAALNLLEVAELSTLLKQKLNLPETAFAPQFAAGPAR 95
Query: 381 XXXXXXXXXXXXXXX-TSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTV 557
TSF VK+ KFD+KQKVALIKEVK LLEG NLVQAKKFVES PT+
Sbjct: 96 AAPAEDEEEAAPKKVQTSFKVKLVKFDEKQKVALIKEVKNLLEGMNLVQAKKFVESAPTI 155
Query: 558 VKADISKDEAEKLKEALTKVGAIIEIE 638
VK DI K+EAEKLKEAL+K GAIIEIE
Sbjct: 156 VKEDIPKEEAEKLKEALSKAGAIIEIE 182
>AY060871-1|AAL28419.1| 182|Drosophila melanogaster GM03767p
protein.
Length = 182
Score = 156 bits (378), Expect = 3e-38
Identities = 85/147 (57%), Positives = 98/147 (66%), Gaps = 1/147 (0%)
Frame = +3
Query: 201 LTIPVPEGVDKPVSPKIEKIVFEITNLNLLEVSELSQVLKKRLNLPDXXXXXXXXXXXXX 380
L P PEG KP +PK++ IV I LNLLEV+ELS +LK++LNLP+
Sbjct: 36 LVPPAPEGAAKPPNPKLDSIVNNIAALNLLEVAELSTLLKQKLNLPETAFAPQFAAGPAR 95
Query: 381 XXXXXXXXXXXXXXX-TSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTV 557
TSF VK+ KFD+KQKVALIKEVK LLEG NLVQAKKFVES PT+
Sbjct: 96 AAPAEDEEEAAPKKVQTSFKVKLVKFDEKQKVALIKEVKNLLEGMNLVQAKKFVESAPTI 155
Query: 558 VKADISKDEAEKLKEALTKVGAIIEIE 638
VK DI K+EAEKLKEAL+K GAIIEIE
Sbjct: 156 VKEDIPKEEAEKLKEALSKAGAIIEIE 182
>AE014296-1546|AAF50348.1| 182|Drosophila melanogaster CG5012-PA
protein.
Length = 182
Score = 156 bits (378), Expect = 3e-38
Identities = 85/147 (57%), Positives = 98/147 (66%), Gaps = 1/147 (0%)
Frame = +3
Query: 201 LTIPVPEGVDKPVSPKIEKIVFEITNLNLLEVSELSQVLKKRLNLPDXXXXXXXXXXXXX 380
L P PEG KP +PK++ IV I LNLLEV+ELS +LK++LNLP+
Sbjct: 36 LVPPAPEGAAKPPNPKLDSIVNNIAALNLLEVAELSTLLKQKLNLPETAFAPQFAAGPAR 95
Query: 381 XXXXXXXXXXXXXXX-TSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTV 557
TSF VK+ KFD+KQKVALIKEVK LLEG NLVQAKKFVES PT+
Sbjct: 96 AAPAEDEEEAAPKKVQTSFKVKLVKFDEKQKVALIKEVKNLLEGMNLVQAKKFVESAPTI 155
Query: 558 VKADISKDEAEKLKEALTKVGAIIEIE 638
VK DI K+EAEKLKEAL+K GAIIEIE
Sbjct: 156 VKEDIPKEEAEKLKEALSKAGAIIEIE 182
>DQ138692-1|ABA86298.1| 169|Drosophila melanogaster CG5012 protein.
Length = 169
Score = 145 bits (352), Expect = 5e-35
Identities = 79/141 (56%), Positives = 92/141 (65%), Gaps = 1/141 (0%)
Frame = +3
Query: 201 LTIPVPEGVDKPVSPKIEKIVFEITNLNLLEVSELSQVLKKRLNLPDXXXXXXXXXXXXX 380
L P PEG KP +PK++ IV I LNLLEV+ELS +LK++LNLP+
Sbjct: 29 LVPPAPEGAAKPPNPKLDSIVNNIAALNLLEVAELSTLLKQKLNLPETAFAPQFAAGPAR 88
Query: 381 XXXXXXXXXXXXXXX-TSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTV 557
TSF VK+ KFD+KQKVALIKEVK LLEG NLVQAKKFVES PT+
Sbjct: 89 AAPAEDEEEAAPKKVQTSFKVKLVKFDEKQKVALIKEVKNLLEGMNLVQAKKFVESAPTI 148
Query: 558 VKADISKDEAEKLKEALTKVG 620
VK DI K+EAEKLKEAL+K G
Sbjct: 149 VKEDIPKEEAEKLKEALSKAG 169
>AY061107-1|AAL28655.1| 595|Drosophila melanogaster LD09531p
protein.
Length = 595
Score = 33.9 bits (74), Expect = 0.23
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +3
Query: 84 KNKTRNMNGIRIIKNVNLQWRSLSRCSVLRQEVTQT-VTPLTIPVPEGVDKPVSPKIEKI 260
K K N IR +LS+ LR+ V Q PL I + K ++ +++I
Sbjct: 54 KRKRHLFNSIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLTQDVQQI 113
Query: 261 VFEITNLNLLEVSELSQVLKKRLNLPD 341
++N LLE+ E +K+R LPD
Sbjct: 114 AKALSNSQLLELDETELKVKRRTKLPD 140
>AF219009-1|AAF27644.1| 595|Drosophila melanogaster multi-sex-combs
protein.
Length = 595
Score = 33.9 bits (74), Expect = 0.23
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +3
Query: 84 KNKTRNMNGIRIIKNVNLQWRSLSRCSVLRQEVTQT-VTPLTIPVPEGVDKPVSPKIEKI 260
K K N IR +LS+ LR+ V Q PL I + K ++ +++I
Sbjct: 54 KRKRHLFNSIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLTQDVQQI 113
Query: 261 VFEITNLNLLEVSELSQVLKKRLNLPD 341
++N LLE+ E +K+R LPD
Sbjct: 114 AKALSNSQLLELDETELKVKRRTKLPD 140
>AE014298-1312|AAF46473.1| 595|Drosophila melanogaster CG12058-PA
protein.
Length = 595
Score = 33.9 bits (74), Expect = 0.23
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +3
Query: 84 KNKTRNMNGIRIIKNVNLQWRSLSRCSVLRQEVTQT-VTPLTIPVPEGVDKPVSPKIEKI 260
K K N IR +LS+ LR+ V Q PL I + K ++ +++I
Sbjct: 54 KRKRHLFNSIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLTQDVQQI 113
Query: 261 VFEITNLNLLEVSELSQVLKKRLNLPD 341
++N LLE+ E +K+R LPD
Sbjct: 114 AKALSNSQLLELDETELKVKRRTKLPD 140
>AE014134-3185|AAF53863.1| 470|Drosophila melanogaster CG13966-PA
protein.
Length = 470
Score = 29.9 bits (64), Expect = 3.7
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +3
Query: 153 SRCSVLRQEVTQTVTPLTIPVPEGVDKPVSPKIEKIVFEITNLNLLEVSELSQVLKKRLN 332
S C+ L +V Q P P +GV P + K + + LN V++ V KR+N
Sbjct: 370 SPCTTLSVKVPQLQPPSPTPSTQGVQDPPNGKTQVTNYNRVMLNHRSVTKPKDVKYKRIN 429
>AY061272-1|AAL28820.1| 707|Drosophila melanogaster LD19634p
protein.
Length = 707
Score = 28.7 bits (61), Expect = 8.5
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +3
Query: 195 TPLTIPVPEGVDKPVSPKIE--KIVFEITNLNLLEVSELSQ--VLKKRLNLP 338
TPL V E +KP+S K++ K +FE ++ E+SE + +L++ LP
Sbjct: 453 TPLEQAVDESRNKPISEKVDLFKSIFEDSDEEETELSEQDKLAILQESFGLP 504
>AE014296-2322|AAF49789.1| 952|Drosophila melanogaster CG8833-PA
protein.
Length = 952
Score = 28.7 bits (61), Expect = 8.5
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +3
Query: 195 TPLTIPVPEGVDKPVSPKIE--KIVFEITNLNLLEVSELSQ--VLKKRLNLP 338
TPL V E +KP+S K++ K +FE ++ E+SE + +L++ LP
Sbjct: 698 TPLEQAVDESRNKPISEKVDLFKSIFEDSDEEETELSEQDKLAILQESFGLP 749
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,291,075
Number of Sequences: 53049
Number of extensions: 451855
Number of successful extensions: 1555
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1555
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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