Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2h07
         (759 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr...    34   0.13 
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr...    34   0.13 
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr...    34   0.13 
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z46242-3|CAA86338.2|  680|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z46242-2|CAA86335.2|  683|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
           protein H19N07.2c protein.
          Length = 1135

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +2

Query: 161 HGGKYLVYVNISVYKSAYNERASDKKCFIRI*FVIGTSFKSAILFN 298
           HGG Y+ Y+N+++++SA +  +S K C      V  T+   AI+ N
Sbjct: 439 HGGHYVTYINVNLHESAVDPTSSAKWCKFDDDVVSRTTTDDAIVSN 484


>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
           protein H19N07.2b protein.
          Length = 1130

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +2

Query: 161 HGGKYLVYVNISVYKSAYNERASDKKCFIRI*FVIGTSFKSAILFN 298
           HGG Y+ Y+N+++++SA +  +S K C      V  T+   AI+ N
Sbjct: 439 HGGHYVTYINVNLHESAVDPTSSAKWCKFDDDVVSRTTTDDAIVSN 484


>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
           protein H19N07.2a protein.
          Length = 1133

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +2

Query: 161 HGGKYLVYVNISVYKSAYNERASDKKCFIRI*FVIGTSFKSAILFN 298
           HGG Y+ Y+N+++++SA +  +S K C      V  T+   AI+ N
Sbjct: 439 HGGHYVTYINVNLHESAVDPTSSAKWCKFDDDVVSRTTTDDAIVSN 484


>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical
           protein F55H12.3 protein.
          Length = 2972

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = -2

Query: 398 KHSFDKKFAFSLGSCFLSISKY 333
           KHSF   F +S  SCFLSIS Y
Sbjct: 60  KHSFSL-FIYSFISCFLSISNY 80


>Z46242-3|CAA86338.2|  680|Caenorhabditis elegans Hypothetical
           protein F35G12.4b protein.
          Length = 680

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +3

Query: 438 SAQHLGCVQMLALLKGNTTRRCSRCDVDPRTEEERIGKKTVPSRGHIKNIRIKV 599
           S   L     L+L+ G  T +C R   DPRT E     K +  RGH  N+R  V
Sbjct: 180 SIYSLATTPNLSLVLGAGTEKCIRL-FDPRTNE-----KIMKLRGHTDNVRALV 227


>Z46242-2|CAA86335.2|  683|Caenorhabditis elegans Hypothetical
           protein F35G12.4a protein.
          Length = 683

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +3

Query: 438 SAQHLGCVQMLALLKGNTTRRCSRCDVDPRTEEERIGKKTVPSRGHIKNIRIKV 599
           S   L     L+L+ G  T +C R   DPRT E     K +  RGH  N+R  V
Sbjct: 180 SIYSLATTPNLSLVLGAGTEKCIRL-FDPRTNE-----KIMKLRGHTDNVRALV 227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,154,535
Number of Sequences: 27780
Number of extensions: 406463
Number of successful extensions: 997
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)