Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2h02
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 86 2e-17
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 65 4e-11
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 42 4e-04
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 40 0.002
U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical pr... 36 0.028
AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical ... 33 0.26
AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical ... 29 2.4
U58754-2|AAB00671.1| 391|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL033514-30|CAA22091.1| 313|Caenorhabditis elegans Hypothetical... 28 5.6
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 7.4
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 7.4
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF067949-4|AAC19237.1| 415|Caenorhabditis elegans Hypothetical ... 27 9.8
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 86.2 bits (204), Expect = 2e-17
Identities = 67/208 (32%), Positives = 96/208 (46%), Gaps = 4/208 (1%)
Frame = +3
Query: 87 GGSLIHPNVVLTAAHYVAAAKELKIRAGEWDTQNTKEIYPYQDRTVKEIVIHKDFNKG-N 263
GGSLI PN VLTAAH A + + + P++ V + IH +N G
Sbjct: 85 GGSLIDPNFVLTAAHCFAKDRRPTSYSVRVGGHRSGSGSPHR---VTAVSIHPWYNIGFP 141
Query: 264 LFYDIALLFLETPLDSAPNVGVACLP--PARERAPAGVRCFATGWGKDKFGKEGRYQVIM 437
YD A++ + P++++ CLP PA E C TGWG G +
Sbjct: 142 SSYDFAIMRIHPPVNTSTTARPICLPSLPAVENR----LCVVTGWGSTIEGSSLSAPTL- 196
Query: 438 KKVDVPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGGEPDK-DTCRGDGGSPLVCPIDYE 614
+++ VP++ C S +GR + +CAG K D+C+GD G PL+C D
Sbjct: 197 REIHVPLLSTLFCSSL--PNYIGRIHL--PSMLCAGYSYGKIDSCQGDSGGPLMCARD-- 250
Query: 615 KNRYVQYGIVXWGIXCGEDGTPGVYVDV 698
+ G+V WGI C G PGVY +V
Sbjct: 251 -GHWELTGVVSWGIGCARPGMPGVYGNV 277
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 65.3 bits (152), Expect = 4e-11
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 8/213 (3%)
Frame = +3
Query: 87 GGSLIHPNVVLTAAHYVAAAKEL---KIRAGEWDTQNT---KEIYPYQDRTVKEIVIHKD 248
G S++ ++TAAH + + ++ G+WD T ++I+ Y R + ++KD
Sbjct: 55 GASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIF-YLQR-IHFYPLYKD 112
Query: 249 FNKGNLFYDIALLFLETP-LDSAPNVGVACLPPARERAPAGVRCFATGWGKDKFGKEGRY 425
+DIA+L + P ++ CLP G +C +GWG RY
Sbjct: 113 I----FSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSMGL----RY 164
Query: 426 QVIMKKVDVPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGG-EPDKDTCRGDGGSPLVCP 602
++ +P+++R C + + + + + CAG E D+C+GD G P C
Sbjct: 165 AERLQAALIPIINRFDCVNSSQI-----YSSMSRSAFCAGYLEGGIDSCQGDSGGPFACR 219
Query: 603 IDYEKNRYVQYGIVXWGIXCGEDGTPGVYVDVS 701
E +V G++ WG C + PG+Y V+
Sbjct: 220 --REDGAFVLAGVISWGDGCAQKKQPGIYTMVA 250
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 41.9 bits (94), Expect = 4e-04
Identities = 59/219 (26%), Positives = 92/219 (42%), Gaps = 14/219 (6%)
Frame = +3
Query: 87 GGSLIHPNVVLTAAHYVAAAKELKIRAGEW--DTQNTKEIYPYQDRTVKEIVIHKDFNKG 260
G ++I ++TAAH A +L+ R+ + + +N +E + +VKE IH +N
Sbjct: 67 GATVIDDFWLVTAAH---CALQLQTRSFVYVREPKNNRE----RSFSVKEAYIHSGYNNQ 119
Query: 261 NLFYDIALLFLETPLDSAPNVGVACL-----PPARERAPAGVRCFATGWGKDKFGKEGRY 425
DIALL + + L S + CL ++ V + G+D G+
Sbjct: 120 TADNDIALLRISSDL-SKLGIKPVCLVHDDSKLLKQYKNGVVIGYGLTLGEDSSGEPKLI 178
Query: 426 -QVIMKKVDVPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGGEPDKDTCRGDGGSPLVCP 602
++ VP++ + C R L ++ +CAG T GD G PL+
Sbjct: 179 NSQTLQSTSVPIISDDDCVKTWRFLSL-LSVKITGYQICAGAYL-HGTAPGDSGGPLL-- 234
Query: 603 IDYEKNRYVQYGIVXWGIXCGEDGT------PGVYVDVS 701
I YVQ GI +G G DG PGVY +S
Sbjct: 235 IHKSNGEYVQIGITSYGAD-GLDGVIDQGKFPGVYTRIS 272
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/131 (27%), Positives = 48/131 (36%), Gaps = 1/131 (0%)
Frame = +3
Query: 273 DIALLFLETPLDSAPNVGVACLPPARE-RAPAGVRCFATGWGKDKFGKEGRYQVIMKKVD 449
DI +L LE+ +D ACLP E +G + GWG D GK G +
Sbjct: 177 DIVILELESTIDDVEGANYACLPFLPEVNIQSGANVTSFGWGSDP-GK-GFDNAAFPMIQ 234
Query: 450 VPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRYV 629
V + T + G S C E DK+ C GD G L ++
Sbjct: 235 VLTLATETLATC--EENWGTSIPFDS--FCTAEEEDKNVCSGDSGGGLTFHQSDSAREFI 290
Query: 630 QYGIVXWGIXC 662
IV +G C
Sbjct: 291 -IAIVSYGSDC 300
>U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical
protein F48E3.4 protein.
Length = 279
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 567 CRGDGGSPLVCPIDYEKNRYVQYGIV 644
C D G+PL C +D E N+YVQ GIV
Sbjct: 197 CWDDIGAPLECVLDVENNKYVQVGIV 222
>AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical
protein W03G9.7 protein.
Length = 548
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 168 GEWDTQNTKEIYPYQDRTVKEIVIHKDFNKGNLFYDIALLFLE 296
G+WD + KE Y+D V++ + K+ N + YD A+ E
Sbjct: 151 GQWDDRYLKEKAEYEDAMVRQETVQKELNIARVNYDNAVKIQE 193
>AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical
protein Y43F8C.6 protein.
Length = 422
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 415 SFPNLSFPQPVAKHLTPAGARSLAGGRHATPTFGAESNG 299
S P+ S P P + + T AG +L HA P GA G
Sbjct: 268 SGPSSSAPGPSSSYSTGAGGGALLSTGHAVPIMGAGGTG 306
>U58754-2|AAB00671.1| 391|Caenorhabditis elegans Hypothetical
protein C39H7.4 protein.
Length = 391
Score = 28.7 bits (61), Expect = 4.3
Identities = 28/104 (26%), Positives = 41/104 (39%)
Frame = +3
Query: 78 YVGGGSLIHPNVVLTAAHYVAAAKELKIRAGEWDTQNTKEIYPYQDRTVKEIVIHKDFNK 257
+V G ++ VVLT AH + KE KI A + NT I V + +D NK
Sbjct: 248 FVAGAFILSSQVVLTTAHGNSYKKE-KILANLYHFSNTVAILISITVIVFAAISFQDVNK 306
Query: 258 GNLFYDIALLFLETPLDSAPNVGVACLPPARERAPAGVRCFATG 389
N D ++ PL+ C P + + A+G
Sbjct: 307 VNHKTD-TCTWMSAPLNLGGIPEFYCFTPQERQTFLSILIGASG 349
>AL033514-30|CAA22091.1| 313|Caenorhabditis elegans Hypothetical
protein Y75B8A.31 protein.
Length = 313
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Frame = +3
Query: 159 IRAGEW-------DTQNTKEIYPYQDRTVKE----IVIHKDFNKGNLFYDIALLFLETPL 305
+RAG+W D PY +R ++ +V++ + N+ D L + TP+
Sbjct: 97 VRAGQWARRLIINDNLECGTQIPYIERAIENGWGVVVMNTNLNESK---DQDLKYSRTPV 153
Query: 306 DSAPNVGVACLPPARERA 359
+ A V +AC+ P+ ++
Sbjct: 154 EHAETVWIACIEPSNAKS 171
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 525 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVXWG 653
S C+GG+ DTC G+ LVC K Y + +G +G
Sbjct: 86 SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 525 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVXWG 653
S C+GG+ DTC G+ LVC K Y + +G +G
Sbjct: 86 SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 525 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVXWG 653
S C+GG+ DTC G+ LVC K Y + +G +G
Sbjct: 86 SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 525 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVXWG 653
S C+GG+ DTC G+ LVC K Y + +G +G
Sbjct: 86 SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 267 FYDIALLFLETPLDSAPNVGVACLPPA 347
F DIA+ LE P++ + ++ ACLP A
Sbjct: 120 FNDIAVFELEEPIEFSKDIFPACLPSA 146
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.5 bits (58), Expect = 9.8
Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = -3
Query: 330 PLPRSGLNPMESRGTAELCRRTGSPY*SPCVSRFP*LSCLDTDISPSCSACPIRRL*-SS 154
P PR +P +S+ A RR SP SP R S S S P RR ++
Sbjct: 435 PAPRRRRSPSQSKSPAP--RRRRSPSKSPQAPR------RRRSPSGSKSRSPRRRRSPAA 486
Query: 153 VPWRRQRSERP*APRSDGSASLPLRKRS 70
P RRQ +R +PR S S R RS
Sbjct: 487 APRRRQSPQRRRSPRRRRSPSSSSRSRS 514
>AF067949-4|AAC19237.1| 415|Caenorhabditis elegans Hypothetical
protein T10H9.3 protein.
Length = 415
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 98 QRASPYVNVQLLSFGLVVIDWFN 30
QRA ++ +LSF L+ IDW+N
Sbjct: 392 QRAFLLFSIVVLSFALLFIDWYN 414
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,592,119
Number of Sequences: 27780
Number of extensions: 287119
Number of successful extensions: 863
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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