Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2g19
         (763 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0722 - 26678873-26680843                                         29   4.0  
01_06_1749 - 39636951-39638102                                         29   5.3  

>11_06_0722 - 26678873-26680843
          Length = 656

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 15/62 (24%), Positives = 26/62 (41%)
 Frame = -3

Query: 680 SCPTLQTETHYCFTTEIGKVVITTRADSQKVLSPVSVYVSSNVTMSVFKYQVQLLFFLNK 501
           SC TL T TH      I   +     + Q  +   +   + +V  S+ +Y   L+ F  +
Sbjct: 472 SCTTLPTTTHIIMAWHIATTLCEVEDEDQHGIDSTTTTTNQHVACSLSRYCAYLVAFAPE 531

Query: 500 IL 495
           +L
Sbjct: 532 LL 533


>01_06_1749 - 39636951-39638102
          Length = 383

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 697 SSIVTTAAPPFKPKRITA 644
           SS+ + AAPPF P RIT+
Sbjct: 164 SSVASAAAPPFDPSRITS 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,040,267
Number of Sequences: 37544
Number of extensions: 298828
Number of successful extensions: 638
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)