Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2g10
(782 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK055496-1|BAB70935.1| 277|Homo sapiens protein ( Homo sapiens ... 257 4e-68
U83194-1|AAD24202.1| 410|Homo sapiens TRAF4-associated factor 2... 255 2e-67
AF121856-1|AAD27829.1| 406|Homo sapiens sorting nexin 6 protein. 255 2e-67
BC040981-1|AAH40981.1| 403|Homo sapiens hypothetical protein FL... 254 2e-67
BC045563-1|AAH45563.1| 403|Homo sapiens hypothetical protein FL... 254 3e-67
BC093980-1|AAH93980.1| 404|Homo sapiens sorting nexin 5 protein. 238 2e-62
BC093623-1|AAH93623.1| 404|Homo sapiens sorting nexin 5 protein. 238 2e-62
AL121585-2|CAC00471.1| 404|Homo sapiens sorting nexin 5 protein. 238 2e-62
AK223308-1|BAD97028.1| 404|Homo sapiens sorting nexin 5 variant... 238 2e-62
AK001793-1|BAA91914.1| 404|Homo sapiens protein ( Homo sapiens ... 238 2e-62
AF121855-1|AAD27828.1| 404|Homo sapiens sorting nexin 5 protein. 238 2e-62
BC062638-1|AAH62638.1| 412|Homo sapiens SNX5 protein protein. 237 3e-62
AL121585-4|CAI14859.1| 228|Homo sapiens sorting nexin 5 protein. 201 3e-51
AL121585-3|CAI14858.1| 269|Homo sapiens sorting nexin 5 protein. 147 4e-35
BC001798-1|AAH01798.1| 290|Homo sapiens SNX6 protein protein. 100 1e-20
BT009841-1|AAP88843.1| 519|Homo sapiens sorting nexin 2 protein. 61 4e-09
BC003382-1|AAH03382.1| 519|Homo sapiens sorting nexin 2 protein. 61 4e-09
AY272044-1|AAQ02693.1| 519|Homo sapiens transformation-related ... 61 4e-09
AF065482-1|AAC17181.1| 519|Homo sapiens sorting nexin 2 protein. 61 4e-09
AF065484-1|AAC17183.1| 457|Homo sapiens sorting nexin 1A protein. 59 2e-08
AF065483-1|AAC17182.1| 522|Homo sapiens sorting nexin 1 protein. 59 2e-08
U53225-1|AAA98672.1| 522|Homo sapiens sorting nexin 1 protein. 58 3e-08
BT006983-1|AAP35629.1| 522|Homo sapiens sorting nexin 1 protein. 58 3e-08
BC000357-1|AAH00357.1| 522|Homo sapiens sorting nexin 1 protein. 58 3e-08
AK222793-1|BAD96513.1| 522|Homo sapiens sorting nexin 1 isoform... 58 3e-08
AK128179-1|BAC87312.1| 557|Homo sapiens protein ( Homo sapiens ... 58 3e-08
AB209013-1|BAD92250.1| 432|Homo sapiens sorting nexin 1 isoform... 58 3e-08
AK222968-1|BAD96688.1| 519|Homo sapiens sorting nexin 2 variant... 58 4e-08
AK222561-1|BAD96281.1| 522|Homo sapiens sorting nexin 1 isoform... 55 3e-07
AK223229-1|BAD96949.1| 387|Homo sapiens sorting nexin 7 isoform... 49 2e-05
BT006747-1|AAP35393.1| 336|Homo sapiens sorting nexin 7 protein. 48 5e-05
BC018105-1|AAH18105.1| 336|Homo sapiens sorting nexin 7 protein. 48 5e-05
BC010349-1|AAH10349.1| 387|Homo sapiens sorting nexin 7 protein. 48 5e-05
AL627442-2|CAH72125.1| 387|Homo sapiens sorting nexin 7 protein. 48 5e-05
AL627442-1|CAH72126.1| 336|Homo sapiens sorting nexin 7 protein. 48 5e-05
AF121857-1|AAD27830.1| 387|Homo sapiens sorting nexin 7 protein. 48 5e-05
AL049989-1|CAB43229.1| 420|Homo sapiens hypothetical protein pr... 47 9e-05
AF043453-1|AAB99852.1| 519|Homo sapiens sorting nexin 2 protein. 36 0.12
Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein. 33 1.5
L41162-1|AAC41947.1| 684|Homo sapiens alpha-3 type IX collagen ... 32 2.0
BC011705-1|AAH11705.1| 684|Homo sapiens collagen, type IX, alph... 32 2.0
BC007574-1|AAH07574.1| 561|Homo sapiens Unknown (protein for IM... 32 2.0
BC004412-1|AAH04412.1| 187|Homo sapiens Unknown (protein for IM... 32 2.0
AL035669-10|CAC12750.1| 684|Homo sapiens collagen type IX alpha... 32 2.0
AF026802-1|AAD47357.1| 684|Homo sapiens alpha-3 type IX collage... 32 2.0
BC015353-1|AAH15353.1| 446|Homo sapiens tripartite motif-contai... 32 2.7
AC009237-2|AAY14782.1| 446|Homo sapiens unknown protein. 32 2.7
BC008869-1|AAH08869.1| 520|Homo sapiens FLJ12886 protein protein. 31 4.7
AK022948-1|BAB14323.1| 495|Homo sapiens protein ( Homo sapiens ... 31 4.7
AF525413-1|AAP80791.1| 962|Homo sapiens cardiac titin N2BA isof... 31 6.2
X91013-1|CAA62495.1| 146|Homo sapiens alpha 3 type IX collagen ... 30 8.2
>AK055496-1|BAB70935.1| 277|Homo sapiens protein ( Homo sapiens
cDNA FLJ30934 fis, clone FEBRA2007017, moderately
similar to Homo sapiens TRAF4-associated factor 2 mRNA.
).
Length = 277
Score = 257 bits (629), Expect = 4e-68
Identities = 121/182 (66%), Positives = 147/182 (80%), Gaps = 1/182 (0%)
Frame = +3
Query: 213 EKKKPNENVSL-ADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSEFIVVRQHEEFVW 389
E K P +V L D+SL V+ISDA+SE++KVKFTV TK+ LP F ++EF VVRQHEEF+W
Sbjct: 10 EGKPPCASVDLQGDSSLQVEISDAVSERDKVKFTVQTKSCLPHFAQTEFSVVRQHEEFIW 69
Query: 390 LHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELEDEYLA 569
LHD Y ENEEYAG IIPPAPPRPDF+ASREKLQ+LGEG+ ++TREEF KMK+ELE EYLA
Sbjct: 70 LHDAYVENEEYAGLIIPPAPPRPDFEASREKLQKLGEGDSSVTREEFAKMKQELEAEYLA 129
Query: 570 TFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLEYEQDLCAKPRGKMDLIGGLVRSMTTTT 749
FKKTVAMHEVFLQRLAAHP RRD + VFLEY QDL + + + +L+GG +R++ +
Sbjct: 130 IFKKTVAMHEVFLQRLAAHPTLRRDHNFFVFLEYGQDLSVRGKNRKELLGGFLRNIVKSA 189
Query: 750 DE 755
DE
Sbjct: 190 DE 191
>U83194-1|AAD24202.1| 410|Homo sapiens TRAF4-associated factor 2
protein.
Length = 410
Score = 255 bits (624), Expect = 2e-67
Identities = 119/184 (64%), Positives = 149/184 (80%), Gaps = 1/184 (0%)
Frame = +3
Query: 234 NVSL-ADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEE 410
NV L +D +L VDISDALSE++KVKFTVHTK++LP F+++EF VVRQHEEF+WLHD + E
Sbjct: 27 NVDLQSDAALQVDISDALSERDKVKFTVHTKSSLPNFKQNEFSVVRQHEEFIWLHDSFVE 86
Query: 411 NEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVA 590
NE+YAGYIIPPAPPRPDFDASREKLQ+LGEGEG++T+EEF KMK+ELE EYLA FKKTVA
Sbjct: 87 NEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTKEEFTKMKQELEAEYLAIFKKTVA 146
Query: 591 MHEVFLQRLAAHPVFRRDSHLRVFLEYEQDLCAKPRGKMDLIGGLVRSMTTTTDEIYLGA 770
MHEVFL R+AAHP+ RRD + VFLEY QDL + + K + + ++M + D + +
Sbjct: 147 MHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVRGKNKKEKLEDFFKNMVKSADGVIVSG 206
Query: 771 TVRD 782
V+D
Sbjct: 207 -VKD 209
>AF121856-1|AAD27829.1| 406|Homo sapiens sorting nexin 6 protein.
Length = 406
Score = 255 bits (624), Expect = 2e-67
Identities = 119/184 (64%), Positives = 149/184 (80%), Gaps = 1/184 (0%)
Frame = +3
Query: 234 NVSL-ADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEE 410
NV L +D +L VDISDALSE++KVKFTVHTK++LP F+++EF VVRQHEEF+WLHD + E
Sbjct: 23 NVDLQSDAALQVDISDALSERDKVKFTVHTKSSLPNFKQNEFSVVRQHEEFIWLHDSFVE 82
Query: 411 NEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVA 590
NE+YAGYIIPPAPPRPDFDASREKLQ+LGEGEG++T+EEF KMK+ELE EYLA FKKTVA
Sbjct: 83 NEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTKEEFTKMKQELEAEYLAIFKKTVA 142
Query: 591 MHEVFLQRLAAHPVFRRDSHLRVFLEYEQDLCAKPRGKMDLIGGLVRSMTTTTDEIYLGA 770
MHEVFL R+AAHP+ RRD + VFLEY QDL + + K + + ++M + D + +
Sbjct: 143 MHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVRGKNKKEKLEDFFKNMVKSADGVIVSG 202
Query: 771 TVRD 782
V+D
Sbjct: 203 -VKD 205
>BC040981-1|AAH40981.1| 403|Homo sapiens hypothetical protein
FLJ30934 protein.
Length = 403
Score = 254 bits (623), Expect = 2e-67
Identities = 116/169 (68%), Positives = 142/169 (84%)
Frame = +3
Query: 249 DNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAG 428
D+SL V+ISDA+SE++KVKFTV TK+ LP F ++EF VVRQHEEF+WLHD Y ENEEYAG
Sbjct: 23 DSSLQVEISDAVSERDKVKFTVQTKSCLPHFAQTEFSVVRQHEEFIWLHDAYVENEEYAG 82
Query: 429 YIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFL 608
IIPPAPPRPDF+ASREKLQ+LGEG+ ++TREEF KMK+ELE EYLA FKKTVAMHEVFL
Sbjct: 83 LIIPPAPPRPDFEASREKLQKLGEGDSSVTREEFAKMKQELEAEYLAIFKKTVAMHEVFL 142
Query: 609 QRLAAHPVFRRDSHLRVFLEYEQDLCAKPRGKMDLIGGLVRSMTTTTDE 755
QRLAAHP RRD++ VFLEY QDL + + + +L+GG +R++ + DE
Sbjct: 143 QRLAAHPTLRRDNNFFVFLEYGQDLSVRGKNRKELLGGFLRNIVKSADE 191
>BC045563-1|AAH45563.1| 403|Homo sapiens hypothetical protein
FLJ30934 protein.
Length = 403
Score = 254 bits (621), Expect = 3e-67
Identities = 116/169 (68%), Positives = 141/169 (83%)
Frame = +3
Query: 249 DNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAG 428
D+SL V+ISDA+SE++KVKFTV TK+ LP F ++EF VVRQHEEF+WLHD Y ENEEYAG
Sbjct: 23 DSSLQVEISDAVSERDKVKFTVQTKSCLPHFAQTEFSVVRQHEEFIWLHDAYVENEEYAG 82
Query: 429 YIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFL 608
IIPPAPPRPDF+ASREKLQ+LGEG+ ++TREEF KMK+ELE EYLA FKKTVAMHEVFL
Sbjct: 83 LIIPPAPPRPDFEASREKLQKLGEGDSSVTREEFAKMKQELEAEYLAIFKKTVAMHEVFL 142
Query: 609 QRLAAHPVFRRDSHLRVFLEYEQDLCAKPRGKMDLIGGLVRSMTTTTDE 755
QRLAAHP RRD + VFLEY QDL + + + +L+GG +R++ + DE
Sbjct: 143 QRLAAHPTLRRDHNFFVFLEYGQDLSVRGKNRKELLGGFLRNIVKSADE 191
>BC093980-1|AAH93980.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 238 bits (582), Expect = 2e-62
Identities = 110/193 (56%), Positives = 141/193 (73%), Gaps = 3/193 (1%)
Frame = +3
Query: 189 PATMDTKVEKKKPNENVSL---ADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSEFI 359
P + + E + +VS+ D SL +DI DALSE++KVKFTVHTKTTLP FQ EF
Sbjct: 5 PELLQQQEEDRSKLRSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLPTFQSPEFS 64
Query: 360 VVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKM 539
V RQHE+FVWLHD E +YAG IIPPAP +PDFD REK+Q+LGEGEG++T+EEF KM
Sbjct: 65 VTRQHEDFVWLHDTLIETTDYAGLIIPPAPTKPDFDGPREKMQKLGEGEGSMTKEEFAKM 124
Query: 540 KEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLEYEQDLCAKPRGKMDLIG 719
K+ELE EYLA FKKTV+ HEVFLQRL++HPV +D + VFLEY+QDL + + ++ G
Sbjct: 125 KQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHVFLEYDQDLSVRRKNTKEMFG 184
Query: 720 GLVRSMTTTTDEI 758
G +S+ + DE+
Sbjct: 185 GFFKSVVKSADEV 197
>BC093623-1|AAH93623.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 238 bits (582), Expect = 2e-62
Identities = 110/193 (56%), Positives = 141/193 (73%), Gaps = 3/193 (1%)
Frame = +3
Query: 189 PATMDTKVEKKKPNENVSL---ADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSEFI 359
P + + E + +VS+ D SL +DI DALSE++KVKFTVHTKTTLP FQ EF
Sbjct: 5 PELLQQQEEDRSKLRSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLPTFQSPEFS 64
Query: 360 VVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKM 539
V RQHE+FVWLHD E +YAG IIPPAP +PDFD REK+Q+LGEGEG++T+EEF KM
Sbjct: 65 VTRQHEDFVWLHDTLIETTDYAGLIIPPAPTKPDFDGPREKMQKLGEGEGSMTKEEFAKM 124
Query: 540 KEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLEYEQDLCAKPRGKMDLIG 719
K+ELE EYLA FKKTV+ HEVFLQRL++HPV +D + VFLEY+QDL + + ++ G
Sbjct: 125 KQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHVFLEYDQDLSVRRKNTKEMFG 184
Query: 720 GLVRSMTTTTDEI 758
G +S+ + DE+
Sbjct: 185 GFFKSVVKSADEV 197
>AL121585-2|CAC00471.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 238 bits (582), Expect = 2e-62
Identities = 110/193 (56%), Positives = 141/193 (73%), Gaps = 3/193 (1%)
Frame = +3
Query: 189 PATMDTKVEKKKPNENVSL---ADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSEFI 359
P + + E + +VS+ D SL +DI DALSE++KVKFTVHTKTTLP FQ EF
Sbjct: 5 PELLQQQEEDRSKLRSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLPTFQSPEFS 64
Query: 360 VVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKM 539
V RQHE+FVWLHD E +YAG IIPPAP +PDFD REK+Q+LGEGEG++T+EEF KM
Sbjct: 65 VTRQHEDFVWLHDTLIETTDYAGLIIPPAPTKPDFDGPREKMQKLGEGEGSMTKEEFAKM 124
Query: 540 KEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLEYEQDLCAKPRGKMDLIG 719
K+ELE EYLA FKKTV+ HEVFLQRL++HPV +D + VFLEY+QDL + + ++ G
Sbjct: 125 KQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHVFLEYDQDLSVRRKNTKEMFG 184
Query: 720 GLVRSMTTTTDEI 758
G +S+ + DE+
Sbjct: 185 GFFKSVVKSADEV 197
>AK223308-1|BAD97028.1| 404|Homo sapiens sorting nexin 5 variant
protein.
Length = 404
Score = 238 bits (582), Expect = 2e-62
Identities = 110/193 (56%), Positives = 141/193 (73%), Gaps = 3/193 (1%)
Frame = +3
Query: 189 PATMDTKVEKKKPNENVSL---ADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSEFI 359
P + + E + +VS+ D SL +DI DALSE++KVKFTVHTKTTLP FQ EF
Sbjct: 5 PELLQQQKEDRSKLRSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLPTFQSPEFS 64
Query: 360 VVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKM 539
V RQHE+FVWLHD E +YAG IIPPAP +PDFD REK+Q+LGEGEG++T+EEF KM
Sbjct: 65 VTRQHEDFVWLHDTLIETTDYAGLIIPPAPTKPDFDGPREKMQKLGEGEGSMTKEEFAKM 124
Query: 540 KEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLEYEQDLCAKPRGKMDLIG 719
K+ELE EYLA FKKTV+ HEVFLQRL++HPV +D + VFLEY+QDL + + ++ G
Sbjct: 125 KQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHVFLEYDQDLSVRRKNTKEMFG 184
Query: 720 GLVRSMTTTTDEI 758
G +S+ + DE+
Sbjct: 185 GFFKSVVKSADEV 197
>AK001793-1|BAA91914.1| 404|Homo sapiens protein ( Homo sapiens
cDNA FLJ10931 fis, clone OVARC1000564. ).
Length = 404
Score = 238 bits (582), Expect = 2e-62
Identities = 110/193 (56%), Positives = 141/193 (73%), Gaps = 3/193 (1%)
Frame = +3
Query: 189 PATMDTKVEKKKPNENVSL---ADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSEFI 359
P + + E + +VS+ D SL +DI DALSE++KVKFTVHTKTTLP FQ EF
Sbjct: 5 PELLQQQEEDRSKLRSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLPTFQSPEFS 64
Query: 360 VVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKM 539
V RQHE+FVWLHD E +YAG IIPPAP +PDFD REK+Q+LGEGEG++T+EEF KM
Sbjct: 65 VTRQHEDFVWLHDTLIETTDYAGLIIPPAPTKPDFDGPREKMQKLGEGEGSMTKEEFAKM 124
Query: 540 KEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLEYEQDLCAKPRGKMDLIG 719
K+ELE EYLA FKKTV+ HEVFLQRL++HPV +D + VFLEY+QDL + + ++ G
Sbjct: 125 KQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHVFLEYDQDLSVRRKNTKEMFG 184
Query: 720 GLVRSMTTTTDEI 758
G +S+ + DE+
Sbjct: 185 GFFKSVVKSADEV 197
>AF121855-1|AAD27828.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 238 bits (582), Expect = 2e-62
Identities = 110/193 (56%), Positives = 141/193 (73%), Gaps = 3/193 (1%)
Frame = +3
Query: 189 PATMDTKVEKKKPNENVSL---ADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSEFI 359
P + + E + +VS+ D SL +DI DALSE++KVKFTVHTKTTLP FQ EF
Sbjct: 5 PELLQQQEEDRSKLRSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLPTFQSPEFS 64
Query: 360 VVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKM 539
V RQHE+FVWLHD E +YAG IIPPAP +PDFD REK+Q+LGEGEG++T+EEF KM
Sbjct: 65 VTRQHEDFVWLHDTLIETTDYAGLIIPPAPTKPDFDGPREKMQKLGEGEGSMTKEEFAKM 124
Query: 540 KEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLEYEQDLCAKPRGKMDLIG 719
K+ELE EYLA FKKTV+ HEVFLQRL++HPV +D + VFLEY+QDL + + ++ G
Sbjct: 125 KQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHVFLEYDQDLSVRRKNTKEMFG 184
Query: 720 GLVRSMTTTTDEI 758
G +S+ + DE+
Sbjct: 185 GFFKSVVKSADEV 197
>BC062638-1|AAH62638.1| 412|Homo sapiens SNX5 protein protein.
Length = 412
Score = 237 bits (580), Expect = 3e-62
Identities = 106/170 (62%), Positives = 132/170 (77%)
Frame = +3
Query: 249 DNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAG 428
D SL +DI DALSE++KVKFTVHTKTTLP FQ EF V RQHE+FVWLHD E +YAG
Sbjct: 36 DPSLQIDIPDALSERDKVKFTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDTLIETTDYAG 95
Query: 429 YIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFL 608
IIPPAP +PDFD REK+Q+LGEGEG++T+EEF KMK+ELE EYLA FKKTV+ HEVFL
Sbjct: 96 LIIPPAPTKPDFDGPREKMQKLGEGEGSMTKEEFAKMKQELEAEYLAVFKKTVSSHEVFL 155
Query: 609 QRLAAHPVFRRDSHLRVFLEYEQDLCAKPRGKMDLIGGLVRSMTTTTDEI 758
QRL++HPV +D + VFLEY+QDL + + ++ GG +S+ + DE+
Sbjct: 156 QRLSSHPVLSKDRNFHVFLEYDQDLSVRRKNTKEMFGGFFKSVVKSADEV 205
>AL121585-4|CAI14859.1| 228|Homo sapiens sorting nexin 5 protein.
Length = 228
Score = 201 bits (490), Expect = 3e-51
Identities = 88/147 (59%), Positives = 112/147 (76%)
Frame = +3
Query: 318 TKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLG 497
+KTTLP FQ EF V RQHE+FVWLHD E +YAG IIPPAP +PDFD REK+Q+LG
Sbjct: 16 SKTTLPTFQSPEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAPTKPDFDGPREKMQKLG 75
Query: 498 EGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLEYEQ 677
EGEG++T+EEF KMK+ELE EYLA FKKTV+ HEVFLQRL++HPV +D + VFLEY+Q
Sbjct: 76 EGEGSMTKEEFAKMKQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHVFLEYDQ 135
Query: 678 DLCAKPRGKMDLIGGLVRSMTTTTDEI 758
DL + + ++ GG +S+ + DE+
Sbjct: 136 DLSVRRKNTKEMFGGFFKSVVKSADEV 162
>AL121585-3|CAI14858.1| 269|Homo sapiens sorting nexin 5 protein.
Length = 269
Score = 147 bits (356), Expect = 4e-35
Identities = 63/108 (58%), Positives = 84/108 (77%)
Frame = +3
Query: 435 IPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQR 614
IPPAP +PDFD REK+Q+LGEGEG++T+EEF KMK+ELE EYLA FKKTV+ HEVFLQR
Sbjct: 53 IPPAPTKPDFDGPREKMQKLGEGEGSMTKEEFAKMKQELEAEYLAVFKKTVSSHEVFLQR 112
Query: 615 LAAHPVFRRDSHLRVFLEYEQDLCAKPRGKMDLIGGLVRSMTTTTDEI 758
L++HPV +D + VFLEY+QDL + + ++ GG +S+ + DE+
Sbjct: 113 LSSHPVLSKDRNFHVFLEYDQDLSVRRKNTKEMFGGFFKSVVKSADEV 160
Score = 44.0 bits (99), Expect = 6e-04
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +3
Query: 189 PATMDTKVEKKKPNENVSL---ADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSEFI 359
P + + E + +VS+ D SL +DI DALSE++KVKFTVHTK P K +F
Sbjct: 5 PELLQQQEEDRSKLRSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKIP-PAPTKPDFD 63
Query: 360 VVRQHEEFVWLHDRYEENEEYA 425
R+ + + + EE+A
Sbjct: 64 GPREKMQKLGEGEGSMTKEEFA 85
>BC001798-1|AAH01798.1| 290|Homo sapiens SNX6 protein protein.
Length = 290
Score = 99.5 bits (237), Expect = 1e-20
Identities = 47/90 (52%), Positives = 63/90 (70%)
Frame = +3
Query: 513 LTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLEYEQDLCAK 692
+T+EEF KMK+ELE EYLA FKKTVAMHEVFL R+AAHP+ RRD + VFLEY QDL +
Sbjct: 1 MTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVR 60
Query: 693 PRGKMDLIGGLVRSMTTTTDEIYLGATVRD 782
+ K + + ++M + D + + V+D
Sbjct: 61 GKNKKEKLEDFFKNMVKSADGVIVSG-VKD 89
>BT009841-1|AAP88843.1| 519|Homo sapiens sorting nexin 2 protein.
Length = 519
Score = 61.3 bits (142), Expect = 4e-09
Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
Frame = +3
Query: 195 TMDTKVEKKKPNENVSLADNSLLVDISDALSEKEKV--------KFTVHTKTTLPEFQKS 350
+M V + E + N + DI +S+ EKV + V TKT+L F KS
Sbjct: 117 SMSAPVIFDRSREEIEEEANGDIFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKS 176
Query: 351 EFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEF 530
EF V R+ +F+ LH + + GYI+PPAP + ++ K +G+ + + T EF
Sbjct: 177 EFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTKVK---VGKEDSSST--EF 231
Query: 531 LKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLE 668
++ K+ A+ E +LQR HP +D LR FLE
Sbjct: 232 VE-------------KRRAAL-ERYLQRTVKHPTLLQDPDLRQFLE 263
>BC003382-1|AAH03382.1| 519|Homo sapiens sorting nexin 2 protein.
Length = 519
Score = 61.3 bits (142), Expect = 4e-09
Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
Frame = +3
Query: 195 TMDTKVEKKKPNENVSLADNSLLVDISDALSEKEKV--------KFTVHTKTTLPEFQKS 350
+M V + E + N + DI +S+ EKV + V TKT+L F KS
Sbjct: 117 SMSAPVIFDRSREEIEEEANGDIFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKS 176
Query: 351 EFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEF 530
EF V R+ +F+ LH + + GYI+PPAP + ++ K +G+ + + T EF
Sbjct: 177 EFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTKVK---VGKEDSSST--EF 231
Query: 531 LKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLE 668
++ K+ A+ E +LQR HP +D LR FLE
Sbjct: 232 VE-------------KRRAAL-ERYLQRTVKHPTLLQDPDLRQFLE 263
>AY272044-1|AAQ02693.1| 519|Homo sapiens transformation-related 9
protein.
Length = 519
Score = 61.3 bits (142), Expect = 4e-09
Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
Frame = +3
Query: 195 TMDTKVEKKKPNENVSLADNSLLVDISDALSEKEKV--------KFTVHTKTTLPEFQKS 350
+M V + E + N + DI +S+ EKV + V TKT+L F KS
Sbjct: 117 SMSAPVIFDRSREEIEEEANGDIFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKS 176
Query: 351 EFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEF 530
EF V R+ +F+ LH + + GYI+PPAP + ++ K +G+ + + T EF
Sbjct: 177 EFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTKVK---VGKEDSSST--EF 231
Query: 531 LKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLE 668
++ K+ A+ E +LQR HP +D LR FLE
Sbjct: 232 VE-------------KRRAAL-ERYLQRTVKHPTLLQDPDLRQFLE 263
>AF065482-1|AAC17181.1| 519|Homo sapiens sorting nexin 2 protein.
Length = 519
Score = 61.3 bits (142), Expect = 4e-09
Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
Frame = +3
Query: 195 TMDTKVEKKKPNENVSLADNSLLVDISDALSEKEKV--------KFTVHTKTTLPEFQKS 350
+M V + E + N + DI +S+ EKV + V TKT+L F KS
Sbjct: 117 SMSAPVIFDRSREEIEEEANGDIFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKS 176
Query: 351 EFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEF 530
EF V R+ +F+ LH + + GYI+PPAP + ++ K +G+ + + T EF
Sbjct: 177 EFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTKVK---VGKEDSSST--EF 231
Query: 531 LKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLE 668
++ K+ A+ E +LQR HP +D LR FLE
Sbjct: 232 VE-------------KRRAAL-ERYLQRTVKHPTLLQDPDLRQFLE 263
>AF065484-1|AAC17183.1| 457|Homo sapiens sorting nexin 1A protein.
Length = 457
Score = 59.3 bits (137), Expect = 2e-08
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Frame = +3
Query: 300 VKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASRE 479
V + V T+T+LP F+ +F V R+ +F+ L+++ E G+I+PP+P + ++
Sbjct: 98 VAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPSPEKSLIGMTKV 157
Query: 480 KLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRV 659
K+ G+ + EFL+ K+ A+ E +LQR+ HP +D +R
Sbjct: 158 KV-----GKEDSSSAEFLE-------------KRRAAL-ERYLQRIVNHPTMLQDPDVRE 198
Query: 660 FLEYEQDLCAKPRGKMDLIG-GLVRSMTTTTDEI 758
FLE E+ + G L G GL++ TD +
Sbjct: 199 FLEKEE--LPRAVGTQTLSGAGLLKMFNKATDAV 230
>AF065483-1|AAC17182.1| 522|Homo sapiens sorting nexin 1 protein.
Length = 522
Score = 59.3 bits (137), Expect = 2e-08
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Frame = +3
Query: 300 VKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASRE 479
V + V T+T+LP F+ +F V R+ +F+ L+++ E G+I+PP+P + ++
Sbjct: 163 VAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPSPEKSLIGMTKV 222
Query: 480 KLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRV 659
K+ G+ + EFL+ K+ A+ E +LQR+ HP +D +R
Sbjct: 223 KV-----GKEDSSSAEFLE-------------KRRAAL-ERYLQRIVNHPTMLQDPDVRE 263
Query: 660 FLEYEQDLCAKPRGKMDLIG-GLVRSMTTTTDEI 758
FLE E+ + G L G GL++ TD +
Sbjct: 264 FLEKEE--LPRAVGTQTLSGAGLLKMFNKATDAV 295
>U53225-1|AAA98672.1| 522|Homo sapiens sorting nexin 1 protein.
Length = 522
Score = 58.4 bits (135), Expect = 3e-08
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Frame = +3
Query: 300 VKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASRE 479
V + V T+T+LP F+ +F V R+ +F+ L+++ E G+I+PP P + ++
Sbjct: 163 VAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKV 222
Query: 480 KLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRV 659
K+ G+ + EFL+ K+ A+ E +LQR+ HP +D +R
Sbjct: 223 KV-----GKEDSSSAEFLE-------------KRRAAL-ERYLQRIVNHPTMLQDPDVRE 263
Query: 660 FLEYEQDLCAKPRGKMDLIG-GLVRSMTTTTDEI 758
FLE E+ + G L G GL++ TD +
Sbjct: 264 FLEKEE--LPRAVGTQTLSGAGLLKMFNKATDAV 295
>BT006983-1|AAP35629.1| 522|Homo sapiens sorting nexin 1 protein.
Length = 522
Score = 58.4 bits (135), Expect = 3e-08
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Frame = +3
Query: 300 VKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASRE 479
V + V T+T+LP F+ +F V R+ +F+ L+++ E G+I+PP P + ++
Sbjct: 163 VAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKV 222
Query: 480 KLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRV 659
K+ G+ + EFL+ K+ A+ E +LQR+ HP +D +R
Sbjct: 223 KV-----GKEDSSSAEFLE-------------KRRAAL-ERYLQRIVNHPTMLQDPDVRE 263
Query: 660 FLEYEQDLCAKPRGKMDLIG-GLVRSMTTTTDEI 758
FLE E+ + G L G GL++ TD +
Sbjct: 264 FLEKEE--LPRAVGTQTLSGAGLLKMFNKATDAV 295
>BC000357-1|AAH00357.1| 522|Homo sapiens sorting nexin 1 protein.
Length = 522
Score = 58.4 bits (135), Expect = 3e-08
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Frame = +3
Query: 300 VKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASRE 479
V + V T+T+LP F+ +F V R+ +F+ L+++ E G+I+PP P + ++
Sbjct: 163 VAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKV 222
Query: 480 KLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRV 659
K+ G+ + EFL+ K+ A+ E +LQR+ HP +D +R
Sbjct: 223 KV-----GKEDSSSAEFLE-------------KRRAAL-ERYLQRIVNHPTMLQDPDVRE 263
Query: 660 FLEYEQDLCAKPRGKMDLIG-GLVRSMTTTTDEI 758
FLE E+ + G L G GL++ TD +
Sbjct: 264 FLEKEE--LPRAVGTQTLSGAGLLKMFNKATDAV 295
>AK222793-1|BAD96513.1| 522|Homo sapiens sorting nexin 1 isoform a
variant protein.
Length = 522
Score = 58.4 bits (135), Expect = 3e-08
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Frame = +3
Query: 300 VKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASRE 479
V + V T+T+LP F+ +F V R+ +F+ L+++ E G+I+PP P + ++
Sbjct: 163 VAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKV 222
Query: 480 KLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRV 659
K+ G+ + EFL+ K+ A+ E +LQR+ HP +D +R
Sbjct: 223 KV-----GKEDSSSAEFLE-------------KRRAAL-ERYLQRIVNHPTMLQDPDVRE 263
Query: 660 FLEYEQDLCAKPRGKMDLIG-GLVRSMTTTTDEI 758
FLE E+ + G L G GL++ TD +
Sbjct: 264 FLEKEE--LPRAVGTQTLSGAGLLKMFNKATDAV 295
>AK128179-1|BAC87312.1| 557|Homo sapiens protein ( Homo sapiens
cDNA FLJ46302 fis, clone TESTI4036048, highly similar
to Sorting nexin 1. ).
Length = 557
Score = 58.4 bits (135), Expect = 3e-08
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Frame = +3
Query: 300 VKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASRE 479
V + V T+T+LP F+ +F V R+ +F+ L+++ E G+I+PP P + ++
Sbjct: 163 VAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKV 222
Query: 480 KLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRV 659
K+ G+ + EFL+ K+ A+ E +LQR+ HP +D +R
Sbjct: 223 KV-----GKEDSSSAEFLE-------------KRRAAL-ERYLQRIVNHPTMLQDPDVRE 263
Query: 660 FLEYEQDLCAKPRGKMDLIG-GLVRSMTTTTDEI 758
FLE E+ + G L G GL++ TD +
Sbjct: 264 FLEKEE--LPRAVGTQTLSGAGLLKMFNKATDAV 295
>AB209013-1|BAD92250.1| 432|Homo sapiens sorting nexin 1 isoform a
variant protein.
Length = 432
Score = 58.4 bits (135), Expect = 3e-08
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Frame = +3
Query: 300 VKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASRE 479
V + V T+T+LP F+ +F V R+ +F+ L+++ E G+I+PP P + ++
Sbjct: 73 VAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKV 132
Query: 480 KLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRV 659
K+ G+ + EFL+ K+ A+ E +LQR+ HP +D +R
Sbjct: 133 KV-----GKEDSSSAEFLE-------------KRRAAL-ERYLQRIVNHPTMLQDPDVRE 173
Query: 660 FLEYEQDLCAKPRGKMDLIG-GLVRSMTTTTDEI 758
FLE E+ + G L G GL++ TD +
Sbjct: 174 FLEKEE--LPRAVGTQTLSGAGLLKMFNKATDAV 205
>AK222968-1|BAD96688.1| 519|Homo sapiens sorting nexin 2 variant
protein.
Length = 519
Score = 58.0 bits (134), Expect = 4e-08
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Frame = +3
Query: 195 TMDTKVEKKKPNENVSLADNSLLVDISDALSEKEKV--------KFTVHTKTTLPEFQKS 350
+M V + E + N + DI +S+ EKV + V TKT+L F KS
Sbjct: 117 SMSAPVIFDRSREEIEEEANGDIFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKS 176
Query: 351 EFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEF 530
EF V R+ +F+ LH + + GYI+PPA + ++ K +G+ + + T EF
Sbjct: 177 EFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAAEKSIVGMTKVK---VGKEDSSST--EF 231
Query: 531 LKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLE 668
++ K+ A+ E +LQR HP +D LR FLE
Sbjct: 232 VE-------------KRRAAL-ERYLQRTVKHPTLLQDPDLRQFLE 263
>AK222561-1|BAD96281.1| 522|Homo sapiens sorting nexin 1 isoform a
variant protein.
Length = 522
Score = 55.2 bits (127), Expect = 3e-07
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Frame = +3
Query: 300 VKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASRE 479
V + V T+T+LP F+ +F V R+ +F+ L+++ E G+I+PP P + ++
Sbjct: 163 VAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLPEKHSQNGFIVPPPPEKSLIGMTKV 222
Query: 480 KLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRV 659
K+ G+ + EFL+ K+ A+ E +LQR+ HP + +R
Sbjct: 223 KV-----GKEDSSSAEFLE-------------KRRAAL-ERYLQRIVNHPTMLQGPDVRE 263
Query: 660 FLEYEQDLCAKPRGKMDLIG-GLVRSMTTTTDEI 758
FLE E+ + G L G GL++ TD +
Sbjct: 264 FLEKEE--LPRAVGTQTLSGAGLLKMFNKATDAV 295
>AK223229-1|BAD96949.1| 387|Homo sapiens sorting nexin 7 isoform a
variant protein.
Length = 387
Score = 49.2 bits (112), Expect = 2e-05
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Frame = +3
Query: 153 DPLSTVPVADPAPATMDTKVEKKKPNENVSLADNSLLVDI--SDALSEKEKVKFTVHTKT 326
D S P+ +P +M ++ K + L D + VD S + + + + + TKT
Sbjct: 2 DMNSFSPMMPTSPLSMINQI---KFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKT 58
Query: 327 TLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGE 506
T EF SEF V R++++F+WL + E E + IIPP P EK G
Sbjct: 59 TRGEFDSSEFEVRRRYQDFLWLKGKLE--EAHPTLIIPPLP---------EKFIVKG--- 104
Query: 507 GALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFL 665
M E D+++ T +K A+H+ FL R+A HP + ++FL
Sbjct: 105 ----------MVERFNDDFIETRRK--ALHK-FLNRIADHPTLTFNEDFKIFL 144
>BT006747-1|AAP35393.1| 336|Homo sapiens sorting nexin 7 protein.
Length = 336
Score = 47.6 bits (108), Expect = 5e-05
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Frame = +3
Query: 153 DPLSTVPVADPAPATMDTKVEKKKPNENVSLADNSLLVDI--SDALSEKEKVKFTVHTKT 326
D S P+ +P +M ++ K + L D + VD S + + + + + TKT
Sbjct: 2 DMNSFSPMMPTSPLSMINQI---KFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKT 58
Query: 327 TLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGE 506
+ EF SEF V R++++F+WL + E E + IIPP P EK G
Sbjct: 59 SRGEFDSSEFEVRRRYQDFLWLKGKLE--EAHPTLIIPPLP---------EKFIVKG--- 104
Query: 507 GALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFL 665
M E D+++ T +K A+H+ FL R+A HP + ++FL
Sbjct: 105 ----------MVERFNDDFIETRRK--ALHK-FLNRIADHPTLTFNEDFKIFL 144
>BC018105-1|AAH18105.1| 336|Homo sapiens sorting nexin 7 protein.
Length = 336
Score = 47.6 bits (108), Expect = 5e-05
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Frame = +3
Query: 153 DPLSTVPVADPAPATMDTKVEKKKPNENVSLADNSLLVDI--SDALSEKEKVKFTVHTKT 326
D S P+ +P +M ++ K + L D + VD S + + + + + TKT
Sbjct: 2 DMNSFSPMMPTSPLSMINQI---KFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKT 58
Query: 327 TLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGE 506
+ EF SEF V R++++F+WL + E E + IIPP P EK G
Sbjct: 59 SRGEFDSSEFEVRRRYQDFLWLKGKLE--EAHPTLIIPPLP---------EKFIVKG--- 104
Query: 507 GALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFL 665
M E D+++ T +K A+H+ FL R+A HP + ++FL
Sbjct: 105 ----------MVERFNDDFIETRRK--ALHK-FLNRIADHPTLTFNEDFKIFL 144
>BC010349-1|AAH10349.1| 387|Homo sapiens sorting nexin 7 protein.
Length = 387
Score = 47.6 bits (108), Expect = 5e-05
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Frame = +3
Query: 153 DPLSTVPVADPAPATMDTKVEKKKPNENVSLADNSLLVDI--SDALSEKEKVKFTVHTKT 326
D S P+ +P +M ++ K + L D + VD S + + + + + TKT
Sbjct: 2 DMNSFSPMMPTSPLSMINQI---KFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKT 58
Query: 327 TLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGE 506
+ EF SEF V R++++F+WL + E E + IIPP P EK G
Sbjct: 59 SRGEFDSSEFEVRRRYQDFLWLKGKLE--EAHPTLIIPPLP---------EKFIVKG--- 104
Query: 507 GALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFL 665
M E D+++ T +K A+H+ FL R+A HP + ++FL
Sbjct: 105 ----------MVERFNDDFIETRRK--ALHK-FLNRIADHPTLTFNEDFKIFL 144
>AL627442-2|CAH72125.1| 387|Homo sapiens sorting nexin 7 protein.
Length = 387
Score = 47.6 bits (108), Expect = 5e-05
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Frame = +3
Query: 153 DPLSTVPVADPAPATMDTKVEKKKPNENVSLADNSLLVDI--SDALSEKEKVKFTVHTKT 326
D S P+ +P +M ++ K + L D + VD S + + + + + TKT
Sbjct: 2 DMNSFSPMMPTSPLSMINQI---KFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKT 58
Query: 327 TLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGE 506
+ EF SEF V R++++F+WL + E E + IIPP P EK G
Sbjct: 59 SRGEFDSSEFEVRRRYQDFLWLKGKLE--EAHPTLIIPPLP---------EKFIVKG--- 104
Query: 507 GALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFL 665
M E D+++ T +K A+H+ FL R+A HP + ++FL
Sbjct: 105 ----------MVERFNDDFIETRRK--ALHK-FLNRIADHPTLTFNEDFKIFL 144
>AL627442-1|CAH72126.1| 336|Homo sapiens sorting nexin 7 protein.
Length = 336
Score = 47.6 bits (108), Expect = 5e-05
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Frame = +3
Query: 153 DPLSTVPVADPAPATMDTKVEKKKPNENVSLADNSLLVDI--SDALSEKEKVKFTVHTKT 326
D S P+ +P +M ++ K + L D + VD S + + + + + TKT
Sbjct: 2 DMNSFSPMMPTSPLSMINQI---KFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKT 58
Query: 327 TLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGE 506
+ EF SEF V R++++F+WL + E E + IIPP P EK G
Sbjct: 59 SRGEFDSSEFEVRRRYQDFLWLKGKLE--EAHPTLIIPPLP---------EKFIVKG--- 104
Query: 507 GALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFL 665
M E D+++ T +K A+H+ FL R+A HP + ++FL
Sbjct: 105 ----------MVERFNDDFIETRRK--ALHK-FLNRIADHPTLTFNEDFKIFL 144
>AF121857-1|AAD27830.1| 387|Homo sapiens sorting nexin 7 protein.
Length = 387
Score = 47.6 bits (108), Expect = 5e-05
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Frame = +3
Query: 153 DPLSTVPVADPAPATMDTKVEKKKPNENVSLADNSLLVDI--SDALSEKEKVKFTVHTKT 326
D S P+ +P +M ++ K + L D + VD S + + + + + TKT
Sbjct: 2 DMNSFSPMMPTSPLSMINQI---KFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKT 58
Query: 327 TLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGE 506
+ EF SEF V R++++F+WL + E E + IIPP P EK G
Sbjct: 59 SRGEFDSSEFEVRRRYQDFLWLKGKLE--EAHPTLIIPPLP---------EKFIVKG--- 104
Query: 507 GALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFL 665
M E D+++ T +K A+H+ FL R+A HP + ++FL
Sbjct: 105 ----------MVERFNDDFIETRRK--ALHK-FLNRIADHPTLTFNEDFKIFL 144
>AL049989-1|CAB43229.1| 420|Homo sapiens hypothetical protein
protein.
Length = 420
Score = 46.8 bits (106), Expect = 9e-05
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 2/176 (1%)
Frame = +3
Query: 144 SSQDPLSTVPVADPAPATMDTKVEKKKPNENVSLADNSLLVDI--SDALSEKEKVKFTVH 317
S D S P+ +P +M ++ K + L D + VD S + + + + +
Sbjct: 32 SLMDMNSFSPMMPTSPLSMINQI---KFEDEPDLKDLFITVDEPESHVTTIETFITYRII 88
Query: 318 TKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLG 497
TKT+ EF SEF V R++++F+WL + E E + IIPP P EK G
Sbjct: 89 TKTSRGEFDSSEFEVRRRYQDFLWLKGKLE--EAHPTLIIPPLP---------EKFIVKG 137
Query: 498 EGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFL 665
+ E D+++ T +K A+H+ FL R+A HP + ++FL
Sbjct: 138 -------------IVERFNDDFIETRRK--ALHK-FLNRIADHPTLTFNEDFKIFL 177
>AF043453-1|AAB99852.1| 519|Homo sapiens sorting nexin 2 protein.
Length = 519
Score = 36.3 bits (80), Expect = 0.12
Identities = 48/167 (28%), Positives = 68/167 (40%), Gaps = 9/167 (5%)
Frame = +3
Query: 195 TMDTKVEKKKPNENVSLADNSLLVDISDALSEKEKV--------KFTVHTKTTLPEFQKS 350
+M V + E + N + DI +S+ EKV + V TKT+L F KS
Sbjct: 118 SMSAPVIFDRSREEIEEEANGDIFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKS 177
Query: 351 EFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEF 530
EF V++ +F+ LH Y +I F A+ + +G
Sbjct: 178 EF-SVKRFTDFLGLHTTLPTT--YLHVVI--------FVATSSRKSIVG----------M 216
Query: 531 LKMKEELEDEYLATF-KKTVAMHEVFLQRLAAHPVFRRDSHLRVFLE 668
K+K ED F +K A E +LQR HP +D LR FLE
Sbjct: 217 TKVKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLE 263
>Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein.
Length = 2663
Score = 32.7 bits (71), Expect = 1.5
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Frame = +3
Query: 60 NYENSFNIL--ILNRTIPFFYNMMQD-----CVE-DSSQDPLSTVPVADPAPATMDTKVE 215
NY + FNI I +T N++++ C E D + L T+ + PAT E
Sbjct: 435 NYADQFNIPTNITTKTHKLSINLLREIDESVCSESDVFSNTLDTLSEIEWNPATKLLNQE 494
Query: 216 KKKPNENVSLAD-NSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSEFIVVRQHEEFVWL 392
+ N AD ++L++D +EKE+++ + K L EF+ E ++ +E +
Sbjct: 495 NIESELNSLRADYDNLVLDYEQLRTEKEEMELKLKEKNDLDEFEALE-RKTKKDQEMQLI 553
Query: 393 HD 398
H+
Sbjct: 554 HE 555
>L41162-1|AAC41947.1| 684|Homo sapiens alpha-3 type IX collagen
protein.
Length = 684
Score = 32.3 bits (70), Expect = 2.0
Identities = 24/68 (35%), Positives = 28/68 (41%)
Frame = +2
Query: 488 ATGRGGRSPH*RRVPQDEGGVGRRVPGDL*EDGGDARSIPPAPGCSSCLPQGFSSQGIPG 667
A G G P + PQ GV PG +DG D P P LP +QG PG
Sbjct: 606 AAGAGLDGPEGDQGPQGPQGV----PGTS-KDGQDGAPGEPGPPGDPGLPGAIGAQGTPG 660
Query: 668 VRTGSLCQ 691
+ S CQ
Sbjct: 661 ICDTSACQ 668
>BC011705-1|AAH11705.1| 684|Homo sapiens collagen, type IX, alpha 3
protein.
Length = 684
Score = 32.3 bits (70), Expect = 2.0
Identities = 24/68 (35%), Positives = 28/68 (41%)
Frame = +2
Query: 488 ATGRGGRSPH*RRVPQDEGGVGRRVPGDL*EDGGDARSIPPAPGCSSCLPQGFSSQGIPG 667
A G G P + PQ GV PG +DG D P P LP +QG PG
Sbjct: 606 AAGAGLDGPEGDQGPQGPQGV----PGTS-KDGQDGAPGEPGPPGDPGLPGAIGAQGTPG 660
Query: 668 VRTGSLCQ 691
+ S CQ
Sbjct: 661 ICDTSACQ 668
>BC007574-1|AAH07574.1| 561|Homo sapiens Unknown (protein for
IMAGE:3139559) protein.
Length = 561
Score = 32.3 bits (70), Expect = 2.0
Identities = 24/68 (35%), Positives = 28/68 (41%)
Frame = +2
Query: 488 ATGRGGRSPH*RRVPQDEGGVGRRVPGDL*EDGGDARSIPPAPGCSSCLPQGFSSQGIPG 667
A G G P + PQ GV PG +DG D P P LP +QG PG
Sbjct: 483 AAGAGLDGPEGDQGPQGPQGV----PGTS-KDGQDGAPGEPGPPGDPGLPGAIGAQGTPG 537
Query: 668 VRTGSLCQ 691
+ S CQ
Sbjct: 538 ICDTSACQ 545
>BC004412-1|AAH04412.1| 187|Homo sapiens Unknown (protein for
IMAGE:3640176) protein.
Length = 187
Score = 32.3 bits (70), Expect = 2.0
Identities = 24/68 (35%), Positives = 28/68 (41%)
Frame = +2
Query: 488 ATGRGGRSPH*RRVPQDEGGVGRRVPGDL*EDGGDARSIPPAPGCSSCLPQGFSSQGIPG 667
A G G P + PQ GV PG +DG D P P LP +QG PG
Sbjct: 109 AAGAGLDGPEGDQGPQGPQGV----PGTS-KDGQDGAPGEPGPPGDPGLPGAIGAQGTPG 163
Query: 668 VRTGSLCQ 691
+ S CQ
Sbjct: 164 ICDTSACQ 171
>AL035669-10|CAC12750.1| 684|Homo sapiens collagen type IX alpha 3
protein.
Length = 684
Score = 32.3 bits (70), Expect = 2.0
Identities = 24/68 (35%), Positives = 28/68 (41%)
Frame = +2
Query: 488 ATGRGGRSPH*RRVPQDEGGVGRRVPGDL*EDGGDARSIPPAPGCSSCLPQGFSSQGIPG 667
A G G P + PQ GV PG +DG D P P LP +QG PG
Sbjct: 606 AAGAGLDGPEGDQGPQGPQGV----PGTS-KDGQDGAPGEPGPPGDPGLPGAIGAQGTPG 660
Query: 668 VRTGSLCQ 691
+ S CQ
Sbjct: 661 ICDTSACQ 668
>AF026802-1|AAD47357.1| 684|Homo sapiens alpha-3 type IX collagen
protein.
Length = 684
Score = 32.3 bits (70), Expect = 2.0
Identities = 24/68 (35%), Positives = 28/68 (41%)
Frame = +2
Query: 488 ATGRGGRSPH*RRVPQDEGGVGRRVPGDL*EDGGDARSIPPAPGCSSCLPQGFSSQGIPG 667
A G G P + PQ GV PG +DG D P P LP +QG PG
Sbjct: 606 AAGAGLDGPEGDQGPQGPQGV----PGTS-KDGQDGAPGEPGPPGDPGLPGAIGAQGTPG 660
Query: 668 VRTGSLCQ 691
+ S CQ
Sbjct: 661 ICDTSACQ 668
>BC015353-1|AAH15353.1| 446|Homo sapiens tripartite
motif-containing 43 protein.
Length = 446
Score = 31.9 bits (69), Expect = 2.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 3 IKTNNLFRSVDSLFLVLCLNYENSFNILILNRTIPFF 113
I+ N+ + + +FL+LCL +N FN+L + P +
Sbjct: 359 IRKNSTMVNSEDIFLLLCLKVDNHFNLLTTSPVFPHY 395
>AC009237-2|AAY14782.1| 446|Homo sapiens unknown protein.
Length = 446
Score = 31.9 bits (69), Expect = 2.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 3 IKTNNLFRSVDSLFLVLCLNYENSFNILILNRTIPFF 113
I+ N+ + + +FL+LCL +N FN+L + P +
Sbjct: 359 IRKNSTMVNSEDIFLLLCLKVDNHFNLLTTSPVFPHY 395
>BC008869-1|AAH08869.1| 520|Homo sapiens FLJ12886 protein protein.
Length = 520
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 138 EDSSQDPLSTVPVADPAPATMDTKVEKKKPNE 233
E S Q P T P A PAPA ++ + KP E
Sbjct: 74 ERSKQPPPPTAPAAPPAPAPLEKPIVLMKPRE 105
>AK022948-1|BAB14323.1| 495|Homo sapiens protein ( Homo sapiens
cDNA FLJ12886 fis, clone NT2RP2004041, weakly similar to
SYNAPSINS IA AND IB. ).
Length = 495
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 138 EDSSQDPLSTVPVADPAPATMDTKVEKKKPNE 233
E S Q P T P A PAPA ++ + KP E
Sbjct: 74 ERSKQPPPPTAPAAPPAPAPLEKPIVLMKPRE 105
>AF525413-1|AAP80791.1| 962|Homo sapiens cardiac titin N2BA isoform
protein.
Length = 962
Score = 30.7 bits (66), Expect = 6.2
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +3
Query: 168 VPVADPAPATMDTKVEKKKPNENVSLADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQK 347
VPVA AP + + ++K +L + ++ V + E E+ + E++
Sbjct: 566 VPVAKKAPPPREVTIMEEKERA-YTLEEEAVSVQREEEYEEYEEYDYK-----EFEEYEP 619
Query: 348 SEFIVVRQHEEFVWL-HDRYEENEEYAGYIIPPAPPRP 458
+E Q+EE+ ++RYEE+EEY P P +P
Sbjct: 620 TE--EYDQYEEYEEREYERYEEHEEYITEPEKPIPVKP 655
>X91013-1|CAA62495.1| 146|Homo sapiens alpha 3 type IX collagen
protein.
Length = 146
Score = 30.3 bits (65), Expect = 8.2
Identities = 23/67 (34%), Positives = 27/67 (40%)
Frame = +2
Query: 488 ATGRGGRSPH*RRVPQDEGGVGRRVPGDL*EDGGDARSIPPAPGCSSCLPQGFSSQGIPG 667
A G G P + PQ GV PG +DG D P P LP +QG PG
Sbjct: 85 AAGAGLDGPEGDQGPQGPQGV----PGTS-KDGQDGAPGEPGPPGDPGLPGAIGAQGTPG 139
Query: 668 VRTGSLC 688
+ S C
Sbjct: 140 ICDTSAC 146
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,595,797
Number of Sequences: 237096
Number of extensions: 2558188
Number of successful extensions: 8247
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 7650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8227
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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