Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2g10
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132898-11|CAB60945.4| 552|Caenorhabditis elegans Hypothetical... 234 6e-62
AL034364-3|CAA22253.1| 162|Caenorhabditis elegans Hypothetical ... 37 0.019
Z93372-5|CAI70403.1| 104|Caenorhabditis elegans Hypothetical pr... 32 0.40
U23511-7|AAC46795.1| 435|Caenorhabditis elegans Hypothetical pr... 32 0.40
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 32 0.53
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 31 1.2
U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated p... 30 1.6
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 30 1.6
Z99281-50|CAD56259.3| 837|Caenorhabditis elegans Hypothetical p... 29 2.8
Z78201-2|CAB01588.1| 324|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical pr... 29 2.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 2.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 2.8
AF465981-1|AAL76993.1| 324|Caenorhabditis elegans cuticle colla... 29 2.8
AF262406-1|AAL08218.1| 324|Caenorhabditis elegans cuticle colla... 29 2.8
AF067216-12|AAL02459.1| 403|Caenorhabditis elegans Hypothetical... 29 2.8
AF067216-11|AAL02458.1| 707|Caenorhabditis elegans Hypothetical... 29 2.8
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 29 3.7
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 24 4.0
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 24 4.0
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 24 4.0
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 5.0
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 29 5.0
U56965-6|AAB52669.1| 205|Caenorhabditis elegans Hypothetical pr... 29 5.0
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 29 5.0
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 29 5.0
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81097-10|CAB03169.1| 492|Caenorhabditis elegans Hypothetical p... 28 6.6
Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical pr... 28 6.6
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 28 6.6
DQ384615-1|ABD34785.1| 492|Caenorhabditis elegans ERGIC-53-like... 28 6.6
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 28 6.6
AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and trans... 28 6.6
AF101315-2|AAC69228.1| 990|Caenorhabditis elegans Hypothetical ... 28 6.6
Z70307-3|CAA94329.1| 308|Caenorhabditis elegans Hypothetical pr... 28 8.7
U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical pr... 28 8.7
>AL132898-11|CAB60945.4| 552|Caenorhabditis elegans Hypothetical
protein Y59A8B.22 protein.
Length = 552
Score = 234 bits (572), Expect = 6e-62
Identities = 105/173 (60%), Positives = 136/173 (78%)
Frame = +3
Query: 246 ADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYA 425
+D ++ VDISDALSE+EKVK+TVHT+T L E K E VVR+HEEF+WLH E+NE YA
Sbjct: 100 SDEAICVDISDALSEREKVKYTVHTRTRLQEM-KPETAVVREHEEFLWLHGTLEDNENYA 158
Query: 426 GYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVF 605
G+IIPPAPP+P+FD+SREKLQ+LGEGE +T+EEFLKMK +LE +YLA FKKTVAMHEVF
Sbjct: 159 GFIIPPAPPKPNFDSSREKLQKLGEGEATMTKEEFLKMKHDLEQDYLAQFKKTVAMHEVF 218
Query: 606 LQRLAAHPVFRRDSHLRVFLEYEQDLCAKPRGKMDLIGGLVRSMTTTTDEIYL 764
LQR+AAHPVF+ D + R+FL+YE +L + + K + + + T + DE+ L
Sbjct: 219 LQRIAAHPVFKNDQNFRIFLQYENELSVRGKNKKEQVESFWKRFTQSADEVLL 271
>AL034364-3|CAA22253.1| 162|Caenorhabditis elegans Hypothetical
protein W06D4.5 protein.
Length = 162
Score = 36.7 bits (81), Expect = 0.019
Identities = 36/169 (21%), Positives = 79/169 (46%), Gaps = 4/169 (2%)
Frame = +3
Query: 174 VADPAPATMDTKVEKKKPNENVSLADNSLLVDISDALSEKE-KVKFT---VHTKTTLPEF 341
+A A AT +++ +E + N L +++ + ++ K+++T + ++ LP F
Sbjct: 1 MASGASATQRIPSKRQTLDEAYAPPANFLEIEVINPITHGVGKMRYTDYEIRMRSNLPVF 60
Query: 342 QKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTR 521
++ E V R++ +F W+ E + + I+ P P F K Q + +
Sbjct: 61 KQKESSVRRRYSDFEWVRAELERDSK----IVVPTLPGKSF-----KRQLPFRSDDGIFE 111
Query: 522 EEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLE 668
EEF++ + +K + E+F+ ++A HP+ + + L +FL+
Sbjct: 112 EEFIENR-----------RKAL---ELFINKVAGHPLAQNERSLHIFLQ 146
>Z93372-5|CAI70403.1| 104|Caenorhabditis elegans Hypothetical
protein BE10.5 protein.
Length = 104
Score = 32.3 bits (70), Expect = 0.40
Identities = 22/88 (25%), Positives = 42/88 (47%)
Frame = +3
Query: 138 EDSSQDPLSTVPVADPAPATMDTKVEKKKPNENVSLADNSLLVDISDALSEKEKVKFTVH 317
E+ PL+ P AP T D + EKK+ + S +D+ + + KV+
Sbjct: 22 ENRHDQPLAPQPAQPGAPLTPDRRTEKKQLK-----SGKSAPMDVRFSKKKSRKVR-EDD 75
Query: 318 TKTTLPEFQKSEFIVVRQHEEFVWLHDR 401
T + +PE + + +++R+H E + D+
Sbjct: 76 TVSNIPE-EMPDLVIIREHTEPFYTDDQ 102
>U23511-7|AAC46795.1| 435|Caenorhabditis elegans Hypothetical
protein C32D5.7 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +3
Query: 438 PPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQR 614
P APPRP+ R + L EGAL ++ + E+ + + + ++V E L R
Sbjct: 86 PTAPPRPNRQLYRNSIDHLSMSEGALKQQTSEESPSEVSEGQRSNWSQSVVKIENALHR 144
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 31.9 bits (69), Expect = 0.53
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Frame = +3
Query: 195 TMDTKVEKKKPNENVSLADNSLLVDISDALSEKEKVKFTVHTKTTL-PEFQKSEFIVVRQ 371
T DTK + P V A+ + +D + ++E E V ++ K +L EF SEF +Q
Sbjct: 487 TEDTKPVETAPAP-VDEAELNDALDRRNKINEGENVPLKMNKKISLYAEF--SEFSR-KQ 542
Query: 372 HEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEEL 551
+ F + +Y+E+++ YI DF+ + +++LGE + + +E +K +E
Sbjct: 543 IQYFSGIFKKYDEDQD--SYI--------DFNELKRMMEKLGEAQTHIALKELIKKVDED 592
Query: 552 ED 557
+D
Sbjct: 593 QD 594
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 138 EDSSQDPLSTVPVADPAPATMDTKVEKKKPNENVSLADNSLLVDISDALSEKEKVK 305
+DSS D + +D + ++ D K +KKK ++ + +S D SD S+ EK K
Sbjct: 135 KDSSDDSSDSSDSSDSSDSSDDDKKKKKKSKKSKNKGSSSDSSDSSDDSSDDEKPK 190
>U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated
protein 2, isoform a protein.
Length = 1538
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = +3
Query: 375 EEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELE 554
EE + DR E E+ A I A R A+ +KL++ + + T E+F + ++E+E
Sbjct: 301 EEVILKEDRTTEEEKAA---IMEARRR----AANKKLKQASKQQSTETEEDFEEDEDEME 353
Query: 555 DEYL--ATFKKTVAMHEV--FLQRL 617
+EY+ A KK H V F+++L
Sbjct: 354 EEYVDEAERKKRGCCHSVGKFIKQL 378
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = +3
Query: 375 EEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELE 554
EE + DR E E+ A I A R A+ +KL++ + + T E+F + ++E+E
Sbjct: 301 EEVILKEDRTTEEEKAA---IMEARRR----AANKKLKQASKQQSTETEEDFEEDEDEME 353
Query: 555 DEYL--ATFKKTVAMHEV--FLQRL 617
+EY+ A KK H V F+++L
Sbjct: 354 EEYVDEAERKKRGCCHSVGKFIKQL 378
>Z99281-50|CAD56259.3| 837|Caenorhabditis elegans Hypothetical
protein Y57G11C.37 protein.
Length = 837
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Frame = +3
Query: 90 LNRTIPFFYNMMQDCVEDSSQDPLSTVPVAD----PAPATMDTKVEKKKPNENVSLA--D 251
L R + N Q+ VE ++ P +P T +T+V ++KPN + +LA D
Sbjct: 511 LRRHVENVRNKRQNSVEQEEEEKSPRTPTTSFFTLGSPTTPETEVRQRKPNSDGTLATGD 570
Query: 252 NSLLVDISDALSEKEKVKFTVHTKTTLPEFQ 344
L +S E +K + LPEF+
Sbjct: 571 FKQLRTLSSIFREDFSLK---TERLPLPEFK 598
>Z78201-2|CAB01588.1| 324|Caenorhabditis elegans Hypothetical
protein ZK836.1 protein.
Length = 324
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = +2
Query: 464 RCLPREATATGRGGRSPH*RRVPQDEGGVGRRVPGDL*EDGGDARSIPPAPGCSSCLPQG 643
+C TG G + P + GV VPG +D D P+ GC +C PQG
Sbjct: 116 QCTVENTCPTGPDGEEGE--QGPDGQDGVDG-VPGFDGQDCPDVEQ-QPSQGCFTC-PQG 170
Query: 644 F----SSQGIPGVR 673
SQG PG+R
Sbjct: 171 LPGPQGSQGAPGIR 184
>Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical
protein T21C9.2 protein.
Length = 1058
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 459 DFDASREKLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRL-AAHPVF 635
DFD S L +LGE + +FLK + + DE K+ A+ ++ L+ + A+P+
Sbjct: 529 DFDPS---LTQLGEPVRRMKHADFLKTVKAVMDEEFYFCKRLEALQDILLETVERANPLH 585
Query: 636 RRDS 647
R S
Sbjct: 586 RHGS 589
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.5 bits (63), Expect = 2.8
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Frame = +3
Query: 138 EDSSQDPLST--VPVADPAPATMDTKVEKKKPNENVSLADNSLLVDISDALSEKEKVKFT 311
E +S+ + T V +PA T K+ KKK ++ S D +KE+ +
Sbjct: 13132 EPTSKKTIDTKDVGATEPADETPKKKIIKKKTEKSDSSISQKSATDSEKVSKQKEQDE-- 13189
Query: 312 VHTKTTLPEFQK-SEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQ 488
TK + E Q +E ++ +E ++ + + E A A + DA +EK++
Sbjct: 13190 -PTKPAVSETQMVTEADKSKKQKE---TDEKLKLDAEIAAKTKQEADEKSKLDA-QEKIK 13244
Query: 489 RLGEGEGALTREEFLKMKEELEDEYLATFK 578
++ E + A +E+ L K +LE E +AT K
Sbjct: 13245 KVSEDDAA-RKEKELNDKLKLESE-IATKK 13272
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 171 PVADPAPATMDTKVEKKKPNENVSLADNSLLVDI---SDALSEKEKVK 305
P + + AT +V KKK ++ S+A ++ L D+ SD + EK K K
Sbjct: 13726 PKPEDSEATPKKRVVKKKTQKSDSVASDASLADVSKLSDDVEEKPKKK 13773
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.5 bits (63), Expect = 2.8
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Frame = +3
Query: 138 EDSSQDPLST--VPVADPAPATMDTKVEKKKPNENVSLADNSLLVDISDALSEKEKVKFT 311
E +S+ + T V +PA T K+ KKK ++ S D +KE+ +
Sbjct: 13132 EPTSKKTIDTKDVGATEPADETPKKKIIKKKTEKSDSSISQKSATDSEKVSKQKEQDE-- 13189
Query: 312 VHTKTTLPEFQK-SEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQ 488
TK + E Q +E ++ +E ++ + + E A A + DA +EK++
Sbjct: 13190 -PTKPAVSETQMVTEADKSKKQKE---TDEKLKLDAEIAAKTKQEADEKSKLDA-QEKIK 13244
Query: 489 RLGEGEGALTREEFLKMKEELEDEYLATFK 578
++ E + A +E+ L K +LE E +AT K
Sbjct: 13245 KVSEDDAA-RKEKELNDKLKLESE-IATKK 13272
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 171 PVADPAPATMDTKVEKKKPNENVSLADNSLLVDI---SDALSEKEKVK 305
P + + AT +V KKK ++ S+A ++ L D+ SD + EK K K
Sbjct: 13726 PKPEDSEATPKKRVVKKKTQKSDSVASDASLADVSKLSDDVEEKPKKK 13773
>AF465981-1|AAL76993.1| 324|Caenorhabditis elegans cuticle collagen
LON-3 protein.
Length = 324
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = +2
Query: 464 RCLPREATATGRGGRSPH*RRVPQDEGGVGRRVPGDL*EDGGDARSIPPAPGCSSCLPQG 643
+C TG G + P + GV VPG +D D P+ GC +C PQG
Sbjct: 116 QCTVENTCPTGPDGEEGE--QGPDGQDGVDG-VPGFDGQDCPDVEQ-QPSQGCFTC-PQG 170
Query: 644 F----SSQGIPGVR 673
SQG PG+R
Sbjct: 171 LPGPQGSQGAPGIR 184
>AF262406-1|AAL08218.1| 324|Caenorhabditis elegans cuticle collagen
protein LON-3 protein.
Length = 324
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = +2
Query: 464 RCLPREATATGRGGRSPH*RRVPQDEGGVGRRVPGDL*EDGGDARSIPPAPGCSSCLPQG 643
+C TG G + P + GV VPG +D D P+ GC +C PQG
Sbjct: 116 QCTVENTCPTGPDGEEGE--QGPDGQDGVDG-VPGFDGQDCPDVEQ-QPSQGCFTC-PQG 170
Query: 644 F----SSQGIPGVR 673
SQG PG+R
Sbjct: 171 LPGPQGSQGAPGIR 184
>AF067216-12|AAL02459.1| 403|Caenorhabditis elegans Hypothetical
protein C35E7.2b protein.
Length = 403
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 399 RYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELEDEYLATFK 578
R E + +IPP+P P +E L++ + L REE ++ +L TFK
Sbjct: 293 RLTEGPKKYNRVIPPSPRIPSSTDKKEMLKKSNDRFDKL-REEVSDVRTQLSGLEDTTFK 351
Query: 579 KTVAMH 596
K +H
Sbjct: 352 KPKKLH 357
>AF067216-11|AAL02458.1| 707|Caenorhabditis elegans Hypothetical
protein C35E7.2a protein.
Length = 707
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 399 RYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELEDEYLATFK 578
R E + +IPP+P P +E L++ + L REE ++ +L TFK
Sbjct: 597 RLTEGPKKYNRVIPPSPRIPSSTDKKEMLKKSNDRFDKL-REEVSDVRTQLSGLEDTTFK 655
Query: 579 KTVAMH 596
K +H
Sbjct: 656 KPKKLH 661
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 477 EKLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVF-LQRLAAHPVFRRDSHL 653
++LQ EG+ T EEF K +E E + ++ F T A + +LA H +F D L
Sbjct: 605 KELQGRKGAEGSGTPEEFKKTQESSELQKISDFPPTPAPPPPYPTPQLAPHDLFLSDDSL 664
Query: 654 RV 659
V
Sbjct: 665 VV 666
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 477 EKLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVF-LQRLAAHPVFRRDSHL 653
++LQ EG+ T EEF K +E E + ++ F T A + +LA H +F D L
Sbjct: 605 KELQGRKGAEGSGTPEEFKKTQESSELQKISDFPPTPAPPPPYPTPQLAPHDLFLSDDSL 664
Query: 654 RV 659
V
Sbjct: 665 VV 666
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 24.2 bits (50), Expect(2) = 4.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 435 IPPAPPRPDFDASR 476
+PP P RPD D +R
Sbjct: 1762 LPPRPDRPDMDPNR 1775
Score = 23.0 bits (47), Expect(2) = 4.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 432 IIPPAPPRPD 461
+ PP PPRPD
Sbjct: 1758 VAPPLPPRPD 1767
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein
C02F4.1 protein.
Length = 1781
Score = 24.2 bits (50), Expect(2) = 4.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 435 IPPAPPRPDFDASR 476
+PP P RPD D +R
Sbjct: 1762 LPPRPDRPDMDPNR 1775
Score = 23.0 bits (47), Expect(2) = 4.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 432 IIPPAPPRPD 461
+ PP PPRPD
Sbjct: 1758 VAPPLPPRPD 1767
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 24.2 bits (50), Expect(2) = 4.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 435 IPPAPPRPDFDASR 476
+PP P RPD D +R
Sbjct: 1762 LPPRPDRPDMDPNR 1775
Score = 23.0 bits (47), Expect(2) = 4.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 432 IIPPAPPRPD 461
+ PP PPRPD
Sbjct: 1758 VAPPLPPRPD 1767
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
protein T28C6.9 protein.
Length = 1861
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 177 ADPAPATMDTKVEKKKPNE-NVSLADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSE 353
AD + M ++E K E NV L L ++ + L +KE+ T T E +
Sbjct: 394 ADFSEKMMRLEMEAKLSGELNVELGRAMLELEEHNELLQKEQEAVTADDTATSRELELHV 453
Query: 354 FIVVRQHEEFVWLHDRYEENEE 419
+V E+ +H++ +E E+
Sbjct: 454 LMVQEMTEQIASMHEKNDEMEK 475
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 530 PQDEGGVGRRVPGDL*EDGGDARSIPPAPGCSSCLPQGFSSQGIPGVR 673
PQ G+G R PG++ G + P S P QG+PGVR
Sbjct: 164 PQGRDGMGGR-PGNMGRPGPPGPAGDPGQAGSKGAPGTHGRQGMPGVR 210
>U56965-6|AAB52669.1| 205|Caenorhabditis elegans Hypothetical
protein C15H9.10 protein.
Length = 205
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 27 SVDSLFLVLCLNYENSFNILILNRTIPFFYNMMQDCVEDSSQDPLSTVP 173
SV L L N E+S +I +LN + F+++ VE+ Q + VP
Sbjct: 120 SVMKLLQKLTTNLESSKSIHVLNSLLDFYFSAALKMVENDEQPLVKYVP 168
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/98 (21%), Positives = 43/98 (43%)
Frame = +3
Query: 60 NYENSFNILILNRTIPFFYNMMQDCVEDSSQDPLSTVPVADPAPATMDTKVEKKKPNENV 239
N N+FN ++ + Y+ + C++ + ++ A PA + +
Sbjct: 1579 NTLNAFNDILSAKEKESVYDAVNKCLQMPQSEAITAESAASPA----------YTEHSSF 1628
Query: 240 SLADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSE 353
S+ D S I +L+E ++ T T TT+P+ Q+ +
Sbjct: 1629 SMDDTSQDAKIEPSLTENQQPTTTATTTTTVPQQQQQQ 1666
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/98 (21%), Positives = 43/98 (43%)
Frame = +3
Query: 60 NYENSFNILILNRTIPFFYNMMQDCVEDSSQDPLSTVPVADPAPATMDTKVEKKKPNENV 239
N N+FN ++ + Y+ + C++ + ++ A PA + +
Sbjct: 1579 NTLNAFNDILSAKEKESVYDAVNKCLQMPQSEAITAESAASPA----------YTEHSSF 1628
Query: 240 SLADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSE 353
S+ D S I +L+E ++ T T TT+P+ Q+ +
Sbjct: 1629 SMDDTSQDAKIEPSLTENQQPTTTATTTTTVPQQQQQQ 1666
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
H08M01.2b protein.
Length = 1341
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 147 SQDPLSTVPVADPAPATMDTKVEKKKPNENVSLADNSL 260
S+ STV + PAP + V ++ NVSL+ +S+
Sbjct: 945 SRSTTSTVSGSSPAPRAVSADVTRRSRTSNVSLSTDSI 982
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
H08M01.2a protein.
Length = 1320
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 147 SQDPLSTVPVADPAPATMDTKVEKKKPNENVSLADNSL 260
S+ STV + PAP + V ++ NVSL+ +S+
Sbjct: 945 SRSTTSTVSGSSPAPRAVSADVTRRSRTSNVSLSTDSI 982
>Z81097-10|CAB03169.1| 492|Caenorhabditis elegans Hypothetical
protein K07A1.8 protein.
Length = 492
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +3
Query: 264 VDISDALSEKEKVKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEY 422
V +++ + ++EK K+ + + E+++ QH + V D Y+ N+ Y
Sbjct: 257 VPVAEQIPQQEKQKYDEEFERQMKEYEQERAKFKEQHPDKVKEDDEYDPNKYY 309
>Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical
protein T01E8.5 protein.
Length = 1270
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 483 LQRLGEGEGALTREEFLKMKEELEDE 560
L R+G+ EGA+ E+ LK EEL DE
Sbjct: 569 LPRIGD-EGAVGAEKMLKQSEELSDE 593
>Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical
protein T01E8.5 protein.
Length = 1270
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 483 LQRLGEGEGALTREEFLKMKEELEDE 560
L R+G+ EGA+ E+ LK EEL DE
Sbjct: 569 LPRIGD-EGAVGAEKMLKQSEELSDE 593
>Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical
protein K02C4.4 protein.
Length = 723
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 288 EKEKVKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFD 467
++EK T+HTK E ++ +V RQ +E + L Y P PP P
Sbjct: 204 KREKKLETLHTKRKERERHQTAELVDRQAKEMLELFKASRSEYSNLQYPSTPPPPVPPSC 263
Query: 468 ASRE 479
+ RE
Sbjct: 264 SKRE 267
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +3
Query: 375 EEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELE 554
EE + DR E E+ A I A R A+ +KL++ + + T E+F + ++E+E
Sbjct: 427 EEVILKEDRTTEEEKAA---IMEARRR----AANKKLKQASKQQSTETEEDFEEDEDEME 479
Query: 555 DEYL 566
+EY+
Sbjct: 480 EEYV 483
>DQ384615-1|ABD34785.1| 492|Caenorhabditis elegans ERGIC-53-like
protein protein.
Length = 492
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +3
Query: 264 VDISDALSEKEKVKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEY 422
V +++ + ++EK K+ + + E+++ QH + V D Y+ N+ Y
Sbjct: 257 VPVAEQIPQQEKQKYDEEFERQMKEYEQERAKFKEQHPDKVKEDDEYDPNKYY 309
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +3
Query: 375 EEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELE 554
EE + DR E E+ A I A R A+ +KL++ + + T E+F + ++E+E
Sbjct: 427 EEVILKEDRTTEEEKAA---IMEARRR----AANKKLKQASKQQSTETEEDFEEDEDEME 479
Query: 555 DEYL 566
+EY+
Sbjct: 480 EEYV 483
>AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and
transglutaminase domainprotein protein.
Length = 723
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 288 EKEKVKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFD 467
++EK T+HTK E ++ +V RQ +E + L Y P PP P
Sbjct: 204 KREKKLETLHTKRKERERHQTAELVDRQAKEMLELFKASRSEYSNLQYPSTPPPPVPPSC 263
Query: 468 ASRE 479
+ RE
Sbjct: 264 SKRE 267
>AF101315-2|AAC69228.1| 990|Caenorhabditis elegans Hypothetical
protein T22H9.3 protein.
Length = 990
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +3
Query: 471 SREKLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSH 650
S+ + R+G GEG +F ++KEE+ D+ TF + + L + A +RDSH
Sbjct: 780 SKIVIYRIGAGEG-----DFKRVKEEV-DKIRGTFNRIQPDYRPQLVVIIA----QRDSH 829
Query: 651 LRVF 662
+RVF
Sbjct: 830 VRVF 833
>Z70307-3|CAA94329.1| 308|Caenorhabditis elegans Hypothetical
protein C39E9.3 protein.
Length = 308
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 527 VPQDEGGVGRRVP-GDL*EDGGDARSIPPAPGCSSCLPQGFSSQGIPG 667
+P +G G P G + ++ GD +++ PGC C G PG
Sbjct: 119 LPGQDGAPGEPGPAGKMGQNTGDVQTMHVDPGCQYCPAGEMGPPGAPG 166
>U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical
protein T20F5.6 protein.
Length = 794
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 435 IPPAPPRPDFDASREKLQRLG 497
+PPA PRP +RE+ +RLG
Sbjct: 400 VPPARPRPGPALNRERFRRLG 420
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,638,308
Number of Sequences: 27780
Number of extensions: 385280
Number of successful extensions: 1584
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1581
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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