Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2f24
(705 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0503 - 3751028-3751063,3751145-3751231,3751333-3751410,375... 160 9e-40
09_04_0686 + 19457832-19457870,19458021-19458107,19459311-194593... 103 1e-22
08_02_1399 + 26771106-26771171,26772004-26772111,26772218-267722... 102 2e-22
12_02_1121 + 26233881-26234000,26234138-26234175,26235840-26236812 83 2e-16
03_05_0477 + 24707460-24707553,24707644-24707711,24707857-247079... 83 2e-16
03_05_0521 + 25160245-25160883 36 0.031
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 32 0.51
10_01_0015 - 187905-188432 31 1.2
09_02_0032 + 3142842-3143148,3143321-3143363,3144117-3144420 29 2.7
07_01_0479 + 3606663-3607448 29 2.7
07_01_0438 + 3328992-3329519 29 2.7
02_01_0302 - 2021221-2023305 29 2.7
10_08_0550 + 18699187-18699272,18699298-18699544 29 3.6
05_05_0100 + 22388457-22388561,22388657-22388808,22388897-223892... 29 3.6
05_05_0099 - 22381586-22382604,22382683-22383056,22383145-223832... 29 3.6
01_06_1094 - 34478538-34478624,34478860-34478931,34479154-344792... 29 3.6
08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497 29 4.8
01_06_0268 - 28026512-28026682,28026782-28026919,28027151-280273... 29 4.8
11_06_0038 - 19486260-19486341,19487141-19487289 28 6.3
09_02_0259 - 6385758-6386199,6387493-6387641 28 6.3
12_02_1012 - 25281820-25281987,25282337-25282409,25283370-252834... 28 8.3
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 28 8.3
03_02_0760 + 10960381-10960461,10960740-10961003,10961334-109616... 28 8.3
02_05_0121 + 26015578-26015613,26015734-26016066,26016184-26016978 28 8.3
>07_01_0503 -
3751028-3751063,3751145-3751231,3751333-3751410,
3751488-3751583,3752124-3752210,3752289-3752357,
3752511-3752600,3752601-3752720,3752907-3753004,
3753084-3753193,3753463-3753533,3753679-3753714,
3753862-3753973,3754495-3754700
Length = 431
Score = 160 bits (389), Expect = 9e-40
Identities = 83/162 (51%), Positives = 99/162 (61%), Gaps = 21/162 (12%)
Frame = +3
Query: 141 GETTKMNMMQAINNAMDITLKNNPTAVLFGEDVAFGGVFRCALGLQEKYGKDRVFNTPLC 320
G ++N+ AIN A+ I L +P + +FGEDV FGGVFRC GL +++G++RVFNTPLC
Sbjct: 45 GAGKEVNLFTAINQALHIALDTDPRSYVFGEDVGFGGVFRCTTGLADRFGRNRVFNTPLC 104
Query: 321 EQXXXXXXXXXXXXXXXXXXEIQFADYIFPAFD---------------------QIVNEA 437
EQ EIQFADYIFPAFD QIVNEA
Sbjct: 105 EQGIAGFAVGLAAMGNRAIAEIQFADYIFPAFDQACLRLDQCFVPTYLYIQLLVQIVNEA 164
Query: 438 AKARYRSGGEYDSGALTVRAPCSAVGHGGLYHSQSPEAFFAH 563
AK RYRSG E++ G LT+R+P AVGHGG YHSQSPEAFF H
Sbjct: 165 AKFRYRSGNEFNCGGLTIRSPYGAVGHGGHYHSQSPEAFFCH 206
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3
Query: 606 AKGLLLACIRERDPCVFLEPKILYRSAAEEVP 701
AKGLLLA IR+ +P VF EPK LYR A EEVP
Sbjct: 261 AKGLLLASIRDPNPVVFFEPKWLYRLAVEEVP 292
>09_04_0686 +
19457832-19457870,19458021-19458107,19459311-19459391,
19459463-19459489,19459589-19459651,19459768-19459854,
19460290-19460415,19460827-19460960,19461037-19461109,
19461307-19461372,19461778-19461816,19461927-19462051,
19462131-19462245,19463109-19463141,19463525-19463593
Length = 387
Score = 103 bits (247), Expect = 1e-22
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Frame = +3
Query: 120 DKERPVDGETTKMNMMQAINNAMDITLKNNPTAVLFGEDVA-FGGVFRCALGLQEKYGKD 296
D R +M + +A+N+A+D + +P+ L GE+V + G ++ + GL +KYG +
Sbjct: 31 DAARAYSAAAKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKISKGLLDKYGPE 90
Query: 297 RVFNTPLCEQXXXXXXXXXXXXXXXXXXEIQFADYIFPAFDQIVNEAAKARYRSGGEYDS 476
RV +TP+ E E ++ A D I+N AAK+ Y S G+ S
Sbjct: 91 RVLDTPITEAGFTGIAVGAAYQGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQI-S 149
Query: 477 GALTVRAPCSAVGHGGLYHSQSPEAFFAHXXXXXXXXXXXXIAAKGLLLACIRERDPCVF 656
+ R P A G HSQ A++AH A+GLL A IR+ DP VF
Sbjct: 150 VPIVFRGPNGAAAGVGAQHSQCYAAWYAHVPGLKVLVPYSAEDARGLLKAAIRDPDPVVF 209
Query: 657 LEPKILY 677
LE ++LY
Sbjct: 210 LENELLY 216
>08_02_1399 +
26771106-26771171,26772004-26772111,26772218-26772280,
26772382-26772468,26772931-26773056,26773418-26773551,
26773627-26773699,26773819-26773884,26774358-26774391,
26774904-26774953,26775067-26775191,26775278-26775392,
26775617-26775685
Length = 371
Score = 102 bits (245), Expect = 2e-22
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Frame = +3
Query: 129 RPVDGETTKMNMMQAINNAMDITLKNNPTAVLFGEDVA-FGGVFRCALGLQEKYGKDRVF 305
R +M + +A+N+A+D + +P+ L GE+V + G ++ + GL +KYG DRV
Sbjct: 14 RTYSAAAKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKISKGLLDKYGPDRVL 73
Query: 306 NTPLCEQXXXXXXXXXXXXXXXXXXEIQFADYIFPAFDQIVNEAAKARYRSGGEYDSGAL 485
+TP+ E E ++ A D I+N AAK+ Y S G+ + +
Sbjct: 74 DTPITEAGFTGIGVGAAYQGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINV-PI 132
Query: 486 TVRAPCSAVGHGGLYHSQSPEAFFAHXXXXXXXXXXXXIAAKGLLLACIRERDPCVFLEP 665
R P A G HSQ A++AH A+GLL A IR+ DP VFLE
Sbjct: 133 VFRGPNGAAAGVGAQHSQCYAAWYAHVPGLKVLTPYSAEDARGLLKAAIRDPDPVVFLEN 192
Query: 666 KILY 677
++LY
Sbjct: 193 ELLY 196
>12_02_1121 + 26233881-26234000,26234138-26234175,26235840-26236812
Length = 376
Score = 83.4 bits (197), Expect = 2e-16
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Frame = +3
Query: 162 MMQAINNAMDITLKNNPTAVLFGEDVA-FGGVFRCALGLQEKYGKDRVFNTPLCEQXXXX 338
+ +A+ A+ +K +PT +FGEDV +GG ++ GL E +G RV +TP+ E
Sbjct: 58 LFEALREALIEEMKEDPTVCVFGEDVGHYGGSYKVTKGLAEMFGDLRVLDTPIAENSFAG 117
Query: 339 XXXXXXXXXXXXXXEIQFADYIFPAFDQIVNEAAKARYRSGGEYDSGALTVRAPCSAVGH 518
E ++ A++QI N Y SGG++ + +R P
Sbjct: 118 MGVGAAMKGLRPIVEGMNMGFLLLAYNQISNNCGMLHYTSGGQFKI-PIVIRGPGGVGRQ 176
Query: 519 GGLYHSQSPEAFFAHXXXXXXXXXXXXIAAKGLLLACIRERDPCVFLEPKILYRSAAEEV 698
G HSQ E++F AKGL+ A IR +P V E +LY + E++
Sbjct: 177 LGAEHSQRLESYFQSIPGLQMVACSTPYNAKGLMKAAIRSENPVVLFEHVLLY-NLKEKI 235
Query: 699 P 701
P
Sbjct: 236 P 236
>03_05_0477 +
24707460-24707553,24707644-24707711,24707857-24707903,
24709188-24710160
Length = 393
Score = 83.4 bits (197), Expect = 2e-16
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Frame = +3
Query: 162 MMQAINNAMDITLKNNPTAVLFGEDVA-FGGVFRCALGLQEKYGKDRVFNTPLCEQXXXX 338
+ +A+ A+ +K +PT +FGEDV +GG ++ GL E +G RV +TP+ E
Sbjct: 75 LFEALREALIEEMKEDPTVCVFGEDVGHYGGSYKVTKGLAEMFGDLRVLDTPIAENSFTG 134
Query: 339 XXXXXXXXXXXXXXEIQFADYIFPAFDQIVNEAAKARYRSGGEYDSGALTVRAPCSAVGH 518
E ++ A++QI N Y SGG++ + +R P
Sbjct: 135 MGVGAAMKGLRPVVEGMNMGFLLLAYNQISNNCGMLHYTSGGQFKI-PIVIRGPGGVGRQ 193
Query: 519 GGLYHSQSPEAFFAHXXXXXXXXXXXXIAAKGLLLACIRERDPCVFLEPKILYRSAAEEV 698
G HSQ E++F AKGL+ A IR +P V E +LY + E++
Sbjct: 194 LGAEHSQRLESYFQSIPGLQMVACSTPYNAKGLMKAAIRSENPVVLFEHVLLY-NLKEKI 252
Query: 699 P 701
P
Sbjct: 253 P 253
>03_05_0521 + 25160245-25160883
Length = 212
Score = 35.9 bits (79), Expect = 0.031
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +2
Query: 509 GRARRTLPLPESGGLLCTCP---RSPGGGAS-RAHSGQGSAAGLHPREGPLRVPGTEDTV 676
GR RR LP PE G R GGG+ + G G A L P EG V G +
Sbjct: 111 GRERRRLPEPEEGATTVAGAWEGRGNGGGSRIQGMGGGGGGASLEPEEGAAAVAGAREEG 170
Query: 677 PVGSRRST 700
+G + S+
Sbjct: 171 VLGRQWSS 178
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 572 SPGGGASRAHSGQGSAAGLHPREGPLRVPGTEDTVPVGSRR 694
+PGG A+ G AA + P R P T +TVP GS R
Sbjct: 86 APGGAATAQREGAPPAAATSVQGAP-RAPATAETVPQGSPR 125
>10_01_0015 - 187905-188432
Length = 175
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 431 RSCQSEVQIWRGVRQRRPHGPRALQCGRARR 523
R+ + + WRG R+RR G R +C R RR
Sbjct: 85 RTASTRSERWRGGRRRRSEGRRGGRCRRGRR 115
>09_02_0032 + 3142842-3143148,3143321-3143363,3144117-3144420
Length = 217
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 618 ADPWPLWA-REAPPPGDRGHVQRRPPDSGS 532
ADP+PL + R P PGD G QRR GS
Sbjct: 66 ADPYPLTSWRTDPAPGDWGWRQRRSTVEGS 95
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -1
Query: 684 PTGTVSSVPGTRRGPSRGCRPAADPWPLWAREAPPPGDRGHVQRRPP 544
P G PG GP G RP P P PPP + PP
Sbjct: 214 PMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPPPGPQQPGQNPP 260
>07_01_0438 + 3328992-3329519
Length = 175
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = -1
Query: 681 TGTVSSVPGTRRGPSRGCRPAADPWPLWAREAPPPGDRGHVQRRPPDSGSG 529
+ T SS P + RGC A P PL AP R ++P SG G
Sbjct: 2 SSTSSSPPPPSKAKRRGCIHGARPQPLIVSSAPAEASR--PSKKPRVSGGG 50
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1
Query: 594 REAPPPGDRGHVQRRPPDSGS 532
R APPPG G + PP SGS
Sbjct: 564 RFAPPPGSYGPIPSTPPSSGS 584
>10_08_0550 + 18699187-18699272,18699298-18699544
Length = 110
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +2
Query: 554 LCTC-PRSPGGGASR-AHSGQGSAAGLHPREGPLRVPG 661
LC PR G G R AH G G G R G R PG
Sbjct: 24 LCVAAPRREGRGRRRPAHRGAGELGGEQARPGQRRTPG 61
>05_05_0100 +
22388457-22388561,22388657-22388808,22388897-22389270,
22389349-22390367
Length = 549
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 295 SLPYFSCNPKAHLKTPPNATSSPNNTAV 212
+ PY+ NP + TPPN T+ N T V
Sbjct: 424 NFPYYPLNPFNYTGTPPNNTNVMNGTKV 451
>05_05_0099 -
22381586-22382604,22382683-22383056,22383145-22383296,
22383392-22383496
Length = 549
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 295 SLPYFSCNPKAHLKTPPNATSSPNNTAV 212
+ PY+ NP + TPPN T+ N T V
Sbjct: 424 NFPYYPLNPFNYTGTPPNNTNVMNGTKV 451
>01_06_1094 -
34478538-34478624,34478860-34478931,34479154-34479222,
34479312-34479422,34480390-34480528,34480590-34480705,
34480821-34480968,34481058-34481215,34481654-34481827,
34482592-34483056
Length = 512
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = +2
Query: 452 QIWRGVRQRRPHGPRALQCGRARRTLPLPESGGLLCTCPRSPGGGASRAHSGQGSAA 622
Q+ + + R PR L A L L + L P SPGG AS + SG GSAA
Sbjct: 5 QLPSSLARARAASPRGLLAAAALLLLLLLAASYSLLLSPSSPGGLASPS-SGPGSAA 60
>08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497
Length = 369
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -1
Query: 642 PSRGCRPA-ADPWPLWAREAPPPGDRGHVQRRP 547
P GC PA A W L + PPP R H+ P
Sbjct: 304 PVAGCSPAEAVLWALLNQGPPPPSMRNHINLLP 336
>01_06_0268 -
28026512-28026682,28026782-28026919,28027151-28027366,
28027488-28027564,28027845-28028448
Length = 401
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = -2
Query: 521 AVPDRTAGRADREGAAVVLPSRSVPRFGSF------VHYLIKCWKYVISKLYFSNSSCAC 360
A+P AGR REG LP R G+ + YL+ W V+ + F+ ++ +
Sbjct: 101 ALPSSAAGRRRREGPLHALPPRPPLAAGALALAAWALSYLVLAWHTVVDVVCFTLTAASL 160
Query: 359 SG 354
G
Sbjct: 161 MG 162
>11_06_0038 - 19486260-19486341,19487141-19487289
Length = 76
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +2
Query: 476 RRPHGPRALQCGRARRTLPLPESGGLLCTCPRSPGGGASRAHSGQGSAAG---LHPREGP 646
R P P L GRA T GG ++ GGG+ + +G G L PRE P
Sbjct: 6 RAPQTPTELGRGRATSTDGSKRQGGGAARRRQASGGGSEGVRARRGLVLGSRQLQPREMP 65
>09_02_0259 - 6385758-6386199,6387493-6387641
Length = 196
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +2
Query: 527 LPLPESGGLLCTCPRSPGGGASRAHSGQGSAAGLHPREGPLRVPGT 664
+PL G L + PR+ GG R G+G AA LHP L PGT
Sbjct: 1 MPLRRGGALPLSAPRAAAGGL-RGGGGRG-AALLHPT--CLSPPGT 42
>12_02_1012 -
25281820-25281987,25282337-25282409,25283370-25283420,
25283523-25283932,25284083-25284413,25285340-25285439,
25287091-25287370
Length = 470
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 672 VSSVPGTRRGPSRGCRPAADP 610
V++VP R+GP RG +PA P
Sbjct: 325 VATVPFKRKGPGRGRKPAQPP 345
>11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 440 QSEV--QIWRG-VRQRRPHGPRALQCGRARRTLPLPESGGLLCTCPRSPGGGASRAHSGQ 610
+SEV ++W G V QRR C R LPLP+ C S GG AS G+
Sbjct: 935 ESEVDSEVWLGWVAQRRV-------CSRLETRLPLPKLNTSCCLVTLSRGGRASNLSRGR 987
>03_02_0760 +
10960381-10960461,10960740-10961003,10961334-10961619,
10961637-10962394
Length = 462
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 542 SGGLLCTCPRSPGGGASRAHSGQGSAAGLHPREGPLRVPGT 664
+GG PG RA S G+A L P +G +PGT
Sbjct: 319 AGGGATGAAAVPGSACVRAASPGGTATFLEPTDGAAVLPGT 359
>02_05_0121 + 26015578-26015613,26015734-26016066,26016184-26016978
Length = 387
Score = 27.9 bits (59), Expect = 8.3
Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +2
Query: 494 RALQCGRARRTLP-LPESGGLLCTCPRSPGGGASRAHSGQGSAAGLHPREGP-LRVPGTE 667
R + A LP LP + L C + R H G SA L P P + TE
Sbjct: 135 RIMDDSLAELPLPQLPAAAAALAACGKPQH---RRPHEGAASAL-LDPMRTPTICALSTE 190
Query: 668 DTVPVGSRRSTR 703
VPV SRRS R
Sbjct: 191 ALVPVKSRRSKR 202
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,420,169
Number of Sequences: 37544
Number of extensions: 477002
Number of successful extensions: 2121
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2101
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -