Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2f23
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    24   1.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   3.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.9  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   7.9  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 3/20 (15%)
 Frame = +3

Query: 432 LILFS---HLVFTDYYLVVQ 482
           LILFS   HLV T YYL+++
Sbjct: 273 LILFSCLLHLVVTPYYLLIE 292


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 491 YFYETVERLFPEESASFPLAKK 556
           YFY  +   +P E A   LA+K
Sbjct: 248 YFYSHLSNPYPSEEAKEELARK 269


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 468 YLVVQFLTISMKQLKGCFLKNLHHSHL 548
           YL+   + +  K+L    L N+  +HL
Sbjct: 168 YLITDMILMRYKELNRVILDNMSRNHL 194


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 205 QKLK*SVGTYVMYNKIIVHISVYVCT*YLIFY 110
           QKL+ S   + + N  ++H  V   T YLI +
Sbjct: 340 QKLEFSACGFFLINGTLLHTIVGAVTVYLIMF 371


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 205 QKLK*SVGTYVMYNKIIVHISVYVCT*YLIFY 110
           QKL+ S   + + N  ++H  V   T YLI +
Sbjct: 165 QKLEFSACGFFLINGTLLHTIVGAVTVYLIMF 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,938
Number of Sequences: 336
Number of extensions: 3372
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)