Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2f23
(738 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC073997-1|AAH73997.1| 195|Homo sapiens peroxisomal membrane pr... 55 2e-07
AY044439-1|AAK95858.1| 195|Homo sapiens 22 kDa peroxisomal memb... 55 2e-07
AF250136-1|AAF73963.1| 195|Homo sapiens 22kDa peroxisomal membr... 55 2e-07
BC093008-1|AAH93008.1| 206|Homo sapiens hypothetical protein MG... 43 0.001
BC005064-1|AAH05064.1| 181|Homo sapiens FKSG24 protein protein. 36 0.15
AF416712-1|AAL16806.1| 181|Homo sapiens unknown protein. 36 0.15
AK124805-1|BAC85954.1| 189|Homo sapiens protein ( Homo sapiens ... 31 3.3
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 31 5.7
>BC073997-1|AAH73997.1| 195|Homo sapiens peroxisomal membrane
protein 2, 22kDa protein.
Length = 195
Score = 55.2 bits (127), Expect = 2e-07
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Frame = +2
Query: 311 VASYLQNLYLHPIKTKAITSCVVGTAGSLASQIVAGE-----SIRLDPIXXXXXXXXXXX 475
+A YL L L+P+ TKA TS ++ G+ +Q++ + S LD
Sbjct: 22 LAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFF 81
Query: 476 XTVP--HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGKTHR 643
T P H+FY +E P E PLA ++LLL+RL+FAP + EGK
Sbjct: 82 FTGPLSHFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDAS 138
Query: 644 AALKQLFALYLPVLEANWK-WLTL 712
A ++ + P L NW+ W L
Sbjct: 139 AFAAKMRGGFWPALRMNWRVWTPL 162
>AY044439-1|AAK95858.1| 195|Homo sapiens 22 kDa peroxisomal
membrane protein 2 protein.
Length = 195
Score = 55.2 bits (127), Expect = 2e-07
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Frame = +2
Query: 311 VASYLQNLYLHPIKTKAITSCVVGTAGSLASQIVAGE-----SIRLDPIXXXXXXXXXXX 475
+A YL L L+P+ TKA TS ++ G+ +Q++ + S LD
Sbjct: 22 LAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFF 81
Query: 476 XTVP--HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGKTHR 643
T P H+FY +E P E PLA ++LLL+RL+FAP + EGK
Sbjct: 82 FTGPLSHFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDAS 138
Query: 644 AALKQLFALYLPVLEANWK-WLTL 712
A ++ + P L NW+ W L
Sbjct: 139 AFAAKMRGGFWPALRMNWRVWTPL 162
>AF250136-1|AAF73963.1| 195|Homo sapiens 22kDa peroxisomal membrane
protein-like protein.
Length = 195
Score = 55.2 bits (127), Expect = 2e-07
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Frame = +2
Query: 311 VASYLQNLYLHPIKTKAITSCVVGTAGSLASQIVAGE-----SIRLDPIXXXXXXXXXXX 475
+A YL L L+P+ TKA TS ++ G+ +Q++ + S LD
Sbjct: 22 LAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFF 81
Query: 476 XTVP--HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGKTHR 643
T P H+FY +E P E PLA ++LLL+RL+FAP + EGK
Sbjct: 82 FTGPLSHFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDAS 138
Query: 644 AALKQLFALYLPVLEANWK-WLTL 712
A ++ + P L NW+ W L
Sbjct: 139 AFAAKMRGGFWPALRMNWRVWTPL 162
>BC093008-1|AAH93008.1| 206|Homo sapiens hypothetical protein
MGC12972 protein.
Length = 206
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 488 HYFYETVERLFPEESA-SFP-LAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 661
HY+Y +++RLFP FP + KK+L+++L+ +PL+ + L EG+T + ++L
Sbjct: 77 HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLGLGCLEGQTVGESCQEL 136
Query: 662 FALYLPVLEANW 697
+ +A+W
Sbjct: 137 REKFWEFYKADW 148
>BC005064-1|AAH05064.1| 181|Homo sapiens FKSG24 protein protein.
Length = 181
Score = 35.9 bits (79), Expect = 0.15
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +2
Query: 488 HYFYETVERLFPEES-ASFP-LAKKLLLERLIFAPLMQAFSLY 610
HY+Y +++RLFP FP + KK+L+++L+ +PL+ + Y
Sbjct: 77 HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWEFY 119
>AF416712-1|AAL16806.1| 181|Homo sapiens unknown protein.
Length = 181
Score = 35.9 bits (79), Expect = 0.15
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +2
Query: 488 HYFYETVERLFPEES-ASFP-LAKKLLLERLIFAPLMQAFSLY 610
HY+Y +++RLFP FP + KK+L+++L+ +PL+ + Y
Sbjct: 77 HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWEFY 119
>AK124805-1|BAC85954.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ42815 fis, clone BRCAN2014143. ).
Length = 189
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -2
Query: 149 YQCVCMYVVSYFLFFSDS*VCNYVHMYNYYLKFM*VFVYVPT 24
Y C+C+Y+ Y +C Y+H+Y Y ++ ++ Y+ T
Sbjct: 20 YPCICIYLHVYTY------ICMYIHIYPYLCMYVHIYPYICT 55
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 30.7 bits (66), Expect = 5.7
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -1
Query: 171 CTIKLSYISVCMYVRXXXXXXXXXXXSM*LCTYV*LLSQIYVGVCICTYCLVFNL 7
C Y+SVCMY+ S+ LC Y+ + + V VCIC C+ +L
Sbjct: 78 CVSVCVYVSVCMYLCVFLCVCVYVSVSVCLCVYLHISVYLCVYVCICV-CVSVSL 131
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,028,437
Number of Sequences: 237096
Number of extensions: 1762371
Number of successful extensions: 2913
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2902
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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