Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2f23
         (738 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061264-1|AAL28812.1|  191|Drosophila melanogaster LD19311p pro...   125   7e-29
AE014296-323|AAF47541.1|  191|Drosophila melanogaster CG7970-PA ...   125   7e-29
AY069111-1|AAL39256.1|  273|Drosophila melanogaster GH12661p pro...    38   0.019
AE014296-695|AAF47794.2|  273|Drosophila melanogaster CG32262-PA...    38   0.019
AY113272-1|AAM29277.1|  196|Drosophila melanogaster AT16953p pro...    33   0.41 
AE014296-2053|AAF49995.1|  196|Drosophila melanogaster CG5906-PA...    33   0.41 
AE014296-2299|ABC66150.1| 1557|Drosophila melanogaster CG17689-P...    31   2.2  
M23702-1|AAA28479.1|  678|Drosophila melanogaster protein ( D.me...    30   3.8  
BT015205-1|AAT94434.1|  677|Drosophila melanogaster RE58537p pro...    30   3.8  
AE014134-2846|AAF53610.1|  677|Drosophila melanogaster CG6667-PB...    30   3.8  
AE014134-2845|AAF53611.1|  677|Drosophila melanogaster CG6667-PA...    30   3.8  
BT025917-1|ABG02161.1|  196|Drosophila melanogaster IP10007p pro...    29   8.7  
BT003441-1|AAO39444.1|  196|Drosophila melanogaster RH63812p pro...    29   8.7  
AL031027-1|CAB41536.1|  196|Drosophila melanogaster EG:80H7.10 p...    29   8.7  
AE014298-212|AAF45630.1|  196|Drosophila melanogaster CG14777-PB...    29   8.7  

>AY061264-1|AAL28812.1|  191|Drosophila melanogaster LD19311p
           protein.
          Length = 191

 Score =  125 bits (301), Expect = 7e-29
 Identities = 62/145 (42%), Positives = 95/145 (65%), Gaps = 1/145 (0%)
 Frame = +2

Query: 281 MSLSKPIMNLVASYLQNLYLHPIKTKAITSCVVGTAGSLASQIVAG-ESIRLDPIXXXXX 457
           M LSKP+ +L  +YL+ L+ HP++TK+IT+CV+ T+ ++ SQ +AG +++    +     
Sbjct: 1   MVLSKPLYSLFGTYLEQLFNHPVRTKSITACVLATSANVTSQRLAGAKTLNQQSVFAYGL 60

Query: 458 XXXXXXXTVPHYFYETVERLFPEESASFPLAKKLLLERLIFAPLMQAFSLYSLARFEGKT 637
                  +VPHYFY TVERLF ++   F      L ERL++AP+ QA SL+ LA FEGK+
Sbjct: 61  FGLIFGGSVPHYFYTTVERLFSQD-VRFRRFFLFLSERLVYAPIYQALSLFFLALFEGKS 119

Query: 638 HRAALKQLFALYLPVLEANWKWLTL 712
              ALK +  LY P+L+ANW++L++
Sbjct: 120 PSTALKNVEKLYWPLLKANWQYLSV 144


>AE014296-323|AAF47541.1|  191|Drosophila melanogaster CG7970-PA
           protein.
          Length = 191

 Score =  125 bits (301), Expect = 7e-29
 Identities = 62/145 (42%), Positives = 95/145 (65%), Gaps = 1/145 (0%)
 Frame = +2

Query: 281 MSLSKPIMNLVASYLQNLYLHPIKTKAITSCVVGTAGSLASQIVAG-ESIRLDPIXXXXX 457
           M LSKP+ +L  +YL+ L+ HP++TK+IT+CV+ T+ ++ SQ +AG +++    +     
Sbjct: 1   MVLSKPLYSLFGTYLEQLFNHPVRTKSITACVLATSANVTSQRLAGAKTLNQQSVFAYGL 60

Query: 458 XXXXXXXTVPHYFYETVERLFPEESASFPLAKKLLLERLIFAPLMQAFSLYSLARFEGKT 637
                  +VPHYFY TVERLF ++   F      L ERL++AP+ QA SL+ LA FEGK+
Sbjct: 61  FGLIFGGSVPHYFYTTVERLFSQD-VRFRRFFLFLSERLVYAPIYQALSLFFLALFEGKS 119

Query: 638 HRAALKQLFALYLPVLEANWKWLTL 712
              ALK +  LY P+L+ANW++L++
Sbjct: 120 PSTALKNVEKLYWPLLKANWQYLSV 144


>AY069111-1|AAL39256.1|  273|Drosophila melanogaster GH12661p
           protein.
          Length = 273

 Score = 37.5 bits (83), Expect = 0.019
 Identities = 19/70 (27%), Positives = 36/70 (51%)
 Frame = +2

Query: 488 HYFYETVERLFPEESASFPLAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQLFA 667
           HY Y  ++R+ P  +    + KK+L+++L+ +P       YSL   E +T  A  ++L +
Sbjct: 131 HYVYNWMDRVMPARTLK-NIFKKILIDQLVMSPACIVIFFYSLCYLERQTLDATNQELIS 189

Query: 668 LYLPVLEANW 697
            +  V   +W
Sbjct: 190 KFPYVYMLDW 199


>AE014296-695|AAF47794.2|  273|Drosophila melanogaster CG32262-PA
           protein.
          Length = 273

 Score = 37.5 bits (83), Expect = 0.019
 Identities = 19/70 (27%), Positives = 36/70 (51%)
 Frame = +2

Query: 488 HYFYETVERLFPEESASFPLAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQLFA 667
           HY Y  ++R+ P  +    + KK+L+++L+ +P       YSL   E +T  A  ++L +
Sbjct: 131 HYVYNWMDRVMPARTLK-NIFKKILIDQLVMSPACIVIFFYSLCYLERQTLDATNQELIS 189

Query: 668 LYLPVLEANW 697
            +  V   +W
Sbjct: 190 KFPYVYMLDW 199


>AY113272-1|AAM29277.1|  196|Drosophila melanogaster AT16953p
           protein.
          Length = 196

 Score = 33.1 bits (72), Expect = 0.41
 Identities = 19/72 (26%), Positives = 36/72 (50%)
 Frame = +2

Query: 482 VPHYFYETVERLFPEESASFPLAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 661
           V HY+Y+ ++ LFP+ +    +  K+LL++ I +P   A    ++A  E  T     +++
Sbjct: 77  VCHYWYQHLDYLFPKRTYKV-VVVKILLDQFICSPFYIAVFFLTMAILEDNTWEELEQEI 135

Query: 662 FALYLPVLEANW 697
               L +  A W
Sbjct: 136 REKALVLYAAEW 147


>AE014296-2053|AAF49995.1|  196|Drosophila melanogaster CG5906-PA
           protein.
          Length = 196

 Score = 33.1 bits (72), Expect = 0.41
 Identities = 19/72 (26%), Positives = 36/72 (50%)
 Frame = +2

Query: 482 VPHYFYETVERLFPEESASFPLAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 661
           V HY+Y+ ++ LFP+ +    +  K+LL++ I +P   A    ++A  E  T     +++
Sbjct: 77  VCHYWYQHLDYLFPKRTYKV-VVVKILLDQFICSPFYIAVFFLTMAILEDNTWEELEQEI 135

Query: 662 FALYLPVLEANW 697
               L +  A W
Sbjct: 136 REKALVLYAAEW 147


>AE014296-2299|ABC66150.1| 1557|Drosophila melanogaster CG17689-PB,
           isoform B protein.
          Length = 1557

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -1

Query: 684 KTGKYNAKSC-FRAAL*VFPSNRAKEYRENACINGAKIKRSNNNFFASGNDADSSGNSLS 508
           + G+ N +SC F     V  +   +++RE     G     SNNN   SG   +++G+S S
Sbjct: 758 REGERNGESCRFALGTRVHANRYIQQFREIFTEEGPGNTSSNNNAAGSGGSTNNNGSSTS 817

Query: 507 TVS*K 493
             + K
Sbjct: 818 ATTLK 822


>M23702-1|AAA28479.1|  678|Drosophila melanogaster protein (
           D.melanogaster embryonicpolarity (dorsal) mRNA, complete
           cds. ).
          Length = 678

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 588 NGAKIKRSNNNFFASGNDADSSGNSLSTV 502
           N A +  +NNN   +GN AD++G +LS +
Sbjct: 615 NNANLNNNNNNNNTAGNQADNNGPTLSNL 643


>BT015205-1|AAT94434.1|  677|Drosophila melanogaster RE58537p
           protein.
          Length = 677

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 588 NGAKIKRSNNNFFASGNDADSSGNSLSTV 502
           N A +  +NNN   +GN AD++G +LS +
Sbjct: 614 NNANLNNNNNNNNTAGNQADNNGPTLSNL 642


>AE014134-2846|AAF53610.1|  677|Drosophila melanogaster CG6667-PB,
           isoform B protein.
          Length = 677

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 588 NGAKIKRSNNNFFASGNDADSSGNSLSTV 502
           N A +  +NNN   +GN AD++G +LS +
Sbjct: 614 NNANLNNNNNNNNTAGNQADNNGPTLSNL 642


>AE014134-2845|AAF53611.1|  677|Drosophila melanogaster CG6667-PA,
           isoform A protein.
          Length = 677

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 588 NGAKIKRSNNNFFASGNDADSSGNSLSTV 502
           N A +  +NNN   +GN AD++G +LS +
Sbjct: 614 NNANLNNNNNNNNTAGNQADNNGPTLSNL 642


>BT025917-1|ABG02161.1|  196|Drosophila melanogaster IP10007p
           protein.
          Length = 196

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 338 LHPIKTKAITSCVVGTAGSLASQIVAGESIR 430
           LHP+   A+T  V+  AGSL  Q + G  +R
Sbjct: 22  LHPMAKGALTYAVMWPAGSLIQQAMEGRKLR 52


>BT003441-1|AAO39444.1|  196|Drosophila melanogaster RH63812p
           protein.
          Length = 196

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 338 LHPIKTKAITSCVVGTAGSLASQIVAGESIR 430
           LHP+   A+T  V+  AGSL  Q + G  +R
Sbjct: 22  LHPMAKGALTYAVMWPAGSLIQQAMEGRKLR 52


>AL031027-1|CAB41536.1|  196|Drosophila melanogaster EG:80H7.10
           protein.
          Length = 196

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 338 LHPIKTKAITSCVVGTAGSLASQIVAGESIR 430
           LHP+   A+T  V+  AGSL  Q + G  +R
Sbjct: 22  LHPMAKGALTYAVMWPAGSLIQQAMEGRKLR 52


>AE014298-212|AAF45630.1|  196|Drosophila melanogaster CG14777-PB
           protein.
          Length = 196

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 338 LHPIKTKAITSCVVGTAGSLASQIVAGESIR 430
           LHP+   A+T  V+  AGSL  Q + G  +R
Sbjct: 22  LHPMAKGALTYAVMWPAGSLIQQAMEGRKLR 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,767,285
Number of Sequences: 53049
Number of extensions: 505068
Number of successful extensions: 1226
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)