Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2f16
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 84 9e-17
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 68 6e-12
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 65 5e-11
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 65 5e-11
Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical pr... 52 5e-07
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 49 2e-06
Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical pr... 48 7e-06
Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical ... 42 4e-04
L14745-7|AAK71354.1| 234|Caenorhabditis elegans Tetraspanin fam... 40 0.001
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 40 0.001
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 40 0.001
U67950-3|AAK84565.1| 138|Caenorhabditis elegans Hypothetical pr... 32 0.30
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 32 0.30
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 32 0.30
AL032624-3|CAL36506.1| 232|Caenorhabditis elegans Hypothetical ... 32 0.30
AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel... 32 0.30
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 32 0.30
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 32 0.30
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 32 0.30
Z69884-4|CAA93751.2| 913|Caenorhabditis elegans Hypothetical pr... 32 0.40
U50191-5|AAK31552.1| 247|Caenorhabditis elegans Tetraspanin fam... 31 0.52
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z81484-7|CAE11296.1| 221|Caenorhabditis elegans Hypothetical pr... 31 0.91
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 31 0.91
U39678-8|AAK39208.2| 228|Caenorhabditis elegans Hypothetical pr... 30 1.2
U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL161712-18|CAC70140.1| 448|Caenorhabditis elegans Hypothetical... 29 2.8
U88182-2|AAB42308.4| 961|Caenorhabditis elegans Patched related... 29 3.7
U88167-7|AAB42229.1| 378|Caenorhabditis elegans Hypothetical pr... 29 3.7
U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin fam... 29 3.7
Z50027-1|CAA90331.1| 583|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z78544-5|CAB01759.2| 324|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z70754-5|CAA94775.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z49125-4|CAA88936.1| 644|Caenorhabditis elegans Hypothetical pr... 28 6.4
U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel t... 28 6.4
DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-t... 28 6.4
AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-t... 28 6.4
AY398504-1|AAQ96213.1| 324|Caenorhabditis elegans SEL-7 protein. 28 6.4
AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical... 28 6.4
AL031265-2|CAE48506.1| 324|Caenorhabditis elegans Hypothetical ... 28 6.4
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 27 8.5
U80028-7|AAG23984.1| 370|Caenorhabditis elegans Serpentine rece... 27 8.5
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 27 8.5
AL023856-7|CAA19563.2| 326|Caenorhabditis elegans Hypothetical ... 27 8.5
AF125956-6|AAD14727.2| 158|Caenorhabditis elegans Serpentine re... 27 8.5
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 84.6 bits (200), Expect = 5e-17
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = +1
Query: 244 FVIAIGVIMLFVSLFGCIGALKESTCLVNIFAVILSIVFILEIAAAITAYSLRSEVSQFL 423
F++ G I++ V FGCIGA K + C + F IL + F LE+AAA+T + + + ++
Sbjct: 59 FLVGAGAIIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYV 118
Query: 424 DKKLREALPLYYQHAEA-QDAFDFIQYELNCCGVDSYMDW 540
+ + + + Y A +DAFD +Q + CCGV +Y DW
Sbjct: 119 ESSMYDTIRNRYSSETAFKDAFDTVQEKFECCGVKTYTDW 158
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 83.8 bits (198), Expect = 9e-17
Identities = 47/177 (26%), Positives = 83/177 (46%)
Frame = +1
Query: 88 ELGMKCIKYMLLCITAIFVLTSALTISVGTTIYAIYHDISFFLSPYAFSPAIFVIAIGVI 267
E G+ +KY+L + + I VG+ + + ++ L + I ++ IG +
Sbjct: 3 EGGVTIVKYLLFLANLVLWVGGLSLIIVGSILQLKFDNVLDILGDERLATPILLLVIGSL 62
Query: 268 MLFVSLFGCIGALKESTCLVNIFAVILSIVFILEIAAAITAYSLRSEVSQFLDKKLREAL 447
+ GC GA++E+ CL FAV+L+++ EIAA I Y+L + +L+ +
Sbjct: 63 CTLLGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGM 122
Query: 448 PLYYQHAEAQDAFDFIQYELNCCGVDSYMDWHAVDPPTGGTGISFANLTVPDSCCAQ 618
Y++ + A+D CCGV + DW ++F T+PDSCC +
Sbjct: 123 VRYHESRGVESAWDKTHQLFECCGVTNSSDW-----------LTFT--TIPDSCCIE 166
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 67.7 bits (158), Expect = 6e-12
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 3/149 (2%)
Frame = +1
Query: 103 CIKYMLLCITAIFVLTSALTISVGTTIYAIYHDISFFLSPYA---FSPAIFVIAIGVIML 273
C+KY + IF L + G + LS + P ++ +G +
Sbjct: 37 CVKYSVFSFNVIFFLLGFGLLLFGVWAQIEKNTFVNMLSKASKLYLDPTWPLLIVGFLTF 96
Query: 274 FVSLFGCIGALKESTCLVNIFAVILSIVFILEIAAAITAYSLRSEVSQFLDKKLREALPL 453
+ GC+G+L+E+T + ++ +L ++ I E +A + AY+ R ++ ++ L + +
Sbjct: 97 IIGFSGCVGSLRENTSFLTFYSTLLGLLLIAEFSAGVFAYACRDQLDNYIRNLLNDVVVG 156
Query: 454 YYQHAEAQDAFDFIQYELNCCGVDSYMDW 540
Y + Q D +Q CCG++ DW
Sbjct: 157 YRDDPDLQLLIDSMQETWMCCGINGADDW 185
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 64.9 bits (151), Expect = 5e-11
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 9/182 (4%)
Frame = +1
Query: 103 CIKYMLLCITAIFVLTSALTISVGTTIYAIYHDI-SFFLSPYAFSPAIFVIAIGVIMLFV 279
C+K+++ + +I L +++G +Y D L +PAI + G + V
Sbjct: 29 CLKWLVFLLNSIVFLVGVGILALG--VYLFIKDFREVKLVDIILNPAILISIFGFSICVV 86
Query: 280 SLFGCIGALKESTCLVNIFAVILSIVFILEIAAAITAYSL-RSEVSQFLDKK--LREALP 450
S FG +GAL+++ L+ FA + + +IL +A + ++L ++ ++ L L A+
Sbjct: 87 SFFGFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVK 146
Query: 451 LYYQHAEAQDAFDFIQYELNCCGVDS----YMDWH-AVDPPTGGTGISFANLTVPDSCCA 615
Y+ + + D +Q L CCGV S Y DW+ + + VP SCC
Sbjct: 147 NYHTNRNLAEIMDALQENLECCGVSSIAQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCCR 206
Query: 616 QS 621
+S
Sbjct: 207 KS 208
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 64.9 bits (151), Expect = 5e-11
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 9/182 (4%)
Frame = +1
Query: 103 CIKYMLLCITAIFVLTSALTISVGTTIYAIYHDI-SFFLSPYAFSPAIFVIAIGVIMLFV 279
C+K+++ + +I L +++G +Y D L +PAI + G + V
Sbjct: 53 CLKWLVFLLNSIVFLVGVGILALG--VYLFIKDFREVKLVDIILNPAILISIFGFSICVV 110
Query: 280 SLFGCIGALKESTCLVNIFAVILSIVFILEIAAAITAYSL-RSEVSQFLDKK--LREALP 450
S FG +GAL+++ L+ FA + + +IL +A + ++L ++ ++ L L A+
Sbjct: 111 SFFGFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVK 170
Query: 451 LYYQHAEAQDAFDFIQYELNCCGVDS----YMDWH-AVDPPTGGTGISFANLTVPDSCCA 615
Y+ + + D +Q L CCGV S Y DW+ + + VP SCC
Sbjct: 171 NYHTNRNLAEIMDALQENLECCGVSSIAQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCCR 230
Query: 616 QS 621
+S
Sbjct: 231 KS 232
>Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical
protein C17G1.8 protein.
Length = 291
Score = 51.6 bits (118), Expect = 5e-07
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 9/171 (5%)
Frame = +1
Query: 139 FVLTSALTISVGTTIYAIYHD-ISFFLSPY-AFSPAIFVIAIGVIMLFVSLFGCIGALKE 312
F ++ ++ VG +Y+ ++ I + Y A S A + GV + + G +G
Sbjct: 14 FQISGLSSLIVGVWLYSSKNNFIELTPTSYSALSAAGLCVFTGVTIFIIVAVGYLGVSWS 73
Query: 313 STCLVNIFAVILSIVFILEIAAAITAYSLRSEVSQFLDKKLRE------ALPLYYQHAEA 474
+ L+ + + ++ ++ A IT + E + L K + + + +
Sbjct: 74 NKSLLYSYIGFVILLILVHGIARITGSLHKEEAKENLRKSMLHNINTTAVVTKIGREIKL 133
Query: 475 QDAFDFIQYELNCCGVDSYMDWH-AVDPPTGGTGISFANLTVPDSCCAQSH 624
+D +Q EL CCGVD+Y DWH +V P NL PDSCC H
Sbjct: 134 SLTWDHLQRELQCCGVDNYTDWHYSVHWPN--------NLYTPDSCCDPQH 176
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/91 (29%), Positives = 46/91 (50%)
Frame = +1
Query: 247 VIAIGVIMLFVSLFGCIGALKESTCLVNIFAVILSIVFILEIAAAITAYSLRSEVSQFLD 426
++A+G ++ V FGC GA ES L+ +F I+ I+ +E+ A + A + R E +
Sbjct: 71 LVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSSIQ 130
Query: 427 KKLREALPLYYQHAEAQDAFDFIQYELNCCG 519
+ L+++ Y E + IQ CCG
Sbjct: 131 QVLKKSSATY----ELRKNIKPIQNVFQCCG 157
>Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical
protein B0198.1 protein.
Length = 279
Score = 47.6 bits (108), Expect = 7e-06
Identities = 36/180 (20%), Positives = 75/180 (41%), Gaps = 6/180 (3%)
Frame = +1
Query: 103 CIKYMLLCITAIFVLTSALTISVGTTIYAIYHDISFFLSPYAFSPAIFVIAIGVIMLFVS 282
C L I+ + V+ L +++ +Y D+ + + + I+ +A+G + V
Sbjct: 23 CCSKCQLFISYLLVIVGILFLALAIWLYIFRGDLIPLIQSHFYVKCIY-LAVGCGVFNVI 81
Query: 283 LFGCIGALKESTCLVNIFAVILSIVFILEIAAAITAYSLRSEVSQFLDKKL-REALPLYY 459
+ + + + C + + ++L I+E +S + Q L+ L + L Y
Sbjct: 82 IGFLVHSAVSNRCALVFYLLMLIFSMIMEGCLIYFTFSYHATYEQELNASLPNDILNNYN 141
Query: 460 QHAEAQDAFDFIQYELNCCGVDSYMDWHAVDP-----PTGGTGISFANLTVPDSCCAQSH 624
A +++Q + CCG +++ DW + P T + +PDSCC +H
Sbjct: 142 LDPNIAKAVNYLQRDSKCCGSNAFNDWPKPEVEDHYLPYAKTVVQRVQY-IPDSCCKSTH 200
>Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical
protein F53B2.2 protein.
Length = 230
Score = 46.0 bits (104), Expect = 2e-05
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Frame = +1
Query: 139 FVLTSAL-TISVGTTIYAIYHDISFFLSPYAFSPAIFV-----IAIGVIMLFVSLFGCIG 300
F+L L + V T Y+I+ + F A + +V I IG M+ + L GC
Sbjct: 15 FILNLGLIVVGVMITWYSIWMILHQFEVTVARTSLFYVYRTISIMIGGCMVVLGLCGCFA 74
Query: 301 ALKESTCLVNIFAVILSIVFILEIAAAITAYSLRSEV-SQFLDKKLREALPLYYQHAEAQ 477
S +++ V++ +VF+++I A + + + + +F+ E + Y+ ++ +
Sbjct: 75 VCFGSKTALSVHLVLVFLVFVVKIVAIVMFLANKDHLRREFVGVYRDELVANYHNNSRTK 134
Query: 478 DAFDFIQYELNCCGVDSYMDW 540
+ D++ L CCG + D+
Sbjct: 135 NTLDWVHTSLKCCGANGCEDF 155
>AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical
protein Y45F10B.1 protein.
Length = 241
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +1
Query: 250 IAIGVIMLFVSLFGCIGALKESTCLVNIFAVILSIVFILEIAAAITAYSLRSEV-SQFLD 426
I IG M+ + GC S +++ V++ IVF+++I A + + + +F+
Sbjct: 69 IMIGGCMVVLGFCGCFAVGFGSKTALSVHLVLVFIVFVVKIVAIVMFLANNDHLRREFVG 128
Query: 427 KKLREALPLYYQHAEAQDAFDFIQYELNCCGVDSYMDW 540
E + Y+ ++ ++ D++ L CCG + D+
Sbjct: 129 VYRDELVANYHNNSRTKNTLDWVHTSLKCCGANGCEDF 166
>L14745-7|AAK71354.1| 234|Caenorhabditis elegans Tetraspanin family
protein 2 protein.
Length = 234
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/121 (24%), Positives = 54/121 (44%)
Frame = +1
Query: 199 DISFFLSPYAFSPAIFVIAIGVIMLFVSLFGCIGALKESTCLVNIFAVILSIVFILEIAA 378
D F + + +S + + +I +S+ G IGA+ + ++ V++ I FI+E+
Sbjct: 58 DDKFDMRSWIYSVYWSIYGLCIIAGPLSIIGLIGAISQKKPVLATCLVLIVIFFIMELGG 117
Query: 379 AITAYSLRSEVSQFLDKKLREALPLYYQHAEAQDAFDFIQYELNCCGVDSYMDWHAVDPP 558
+I +S R + L R A +Y ++ IQ NCCGV W + P
Sbjct: 118 SIALWSKRGSLRSLL---YRFANDIYLTNSVFD--ISIIQNTYNCCGVQD-GQWKCPNAP 171
Query: 559 T 561
+
Sbjct: 172 S 172
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 39.9 bits (89), Expect = 0.001
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Frame = +1
Query: 259 GVIMLFVSLFGCIGALKESTCLVNIFAVILSIVFILEIAAAITAYSLRSEV--SQFLDKK 432
G I++ V+ GC GA KE L+ ++ L ++ ++IAA I A+ L S + + F D
Sbjct: 90 GFIVIVVAFLGCCGAAKEWRPLLCCYSSCLMLILAIQIAATIYAF-LHSHMFENDFRD-I 147
Query: 433 LREALPLY------YQHAEAQD------AFDFIQYELNCCGVDS 528
L +L +Y QD A+D I E +CCGVDS
Sbjct: 148 LHSSLKMYNGTDNMKVSNNPQDGLLVKTAWDKIMIEKSCCGVDS 191
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +1
Query: 247 VIAIGVIMLFVSLFGCIGALKESTCLVNIFAVILSIVFILEIAAAITAYSLRSEVSQFLD 426
+I + + + G IGA+ S L+ + + + I+F+LEIA IT R V + +
Sbjct: 74 IIGFAIANVIIGFVGVIGAVIRSKYLLAPYFLFMVILFLLEIAIGITVLVKRRSVRRTVK 133
Query: 427 KKLREALPLYYQHAEAQ-DAFDFIQYELNCCGVDS 528
+ + ++ + +A+A AF+F NCCG ++
Sbjct: 134 EYVFDS---FNMNAQADISAFNF---RYNCCGAEN 162
>U67950-3|AAK84565.1| 138|Caenorhabditis elegans Hypothetical
protein T01B6.4 protein.
Length = 138
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = -2
Query: 624 VGLGAARIGDREVGKANAGPSSGGVDRMPVHVAID 520
VG RIG R VG N PSS V +PV V D
Sbjct: 100 VGRYGFRIGKRFVGDQNDSPSSSAVQMLPVQVMYD 134
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 532 MDWHAVDPPTGGTGISFANLTVPDSCCA 615
MD+H V P T ++ +L +PD+ CA
Sbjct: 221 MDYHCVQPKTDPNNVTIMDLAIPDTMCA 248
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 532 MDWHAVDPPTGGTGISFANLTVPDSCCA 615
MD+H V P T ++ +L +PD+ CA
Sbjct: 221 MDYHCVQPKTDPNNVTIMDLAIPDTMCA 248
>AL032624-3|CAL36506.1| 232|Caenorhabditis elegans Hypothetical
protein Y49A10A.2 protein.
Length = 232
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -2
Query: 375 RDLQNEHDAKDHCENVDQAGTLFQGTDAAE-ERDEQHYDAN-RDDKDSRGEGVWRQEERD 202
RDL+ E D + G +G E E++EQ + ++D++ G+G + +E
Sbjct: 114 RDLKLELDDSEDIRKSGTNGNHHRGEPKEELEKEEQEKEERMKEDEEKNGDGEYEDDEDQ 173
Query: 201 VMVDRVNRS 175
M D NR+
Sbjct: 174 KMADEKNRN 182
>AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
b protein.
Length = 978
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 532 MDWHAVDPPTGGTGISFANLTVPDSCCA 615
MD+H V P T ++ +L +PD+ CA
Sbjct: 279 MDYHCVQPKTDPNNVTIMDLAIPDTMCA 306
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 532 MDWHAVDPPTGGTGISFANLTVPDSCCA 615
MD+H V P T ++ +L +PD+ CA
Sbjct: 279 MDYHCVQPKTDPNNVTIMDLAIPDTMCA 306
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 532 MDWHAVDPPTGGTGISFANLTVPDSCCA 615
MD+H V P T ++ +L +PD+ CA
Sbjct: 279 MDYHCVQPKTDPNNVTIMDLAIPDTMCA 306
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 532 MDWHAVDPPTGGTGISFANLTVPDSCCA 615
MD+H V P T ++ +L +PD+ CA
Sbjct: 251 MDYHCVQPKTDPNNVTIMDLAIPDTMCA 278
>Z69884-4|CAA93751.2| 913|Caenorhabditis elegans Hypothetical
protein F31F6.5 protein.
Length = 913
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/61 (27%), Positives = 36/61 (59%)
Frame = +1
Query: 202 ISFFLSPYAFSPAIFVIAIGVIMLFVSLFGCIGALKESTCLVNIFAVILSIVFILEIAAA 381
+SF L P P+ FVI + ++ + + +FG + + V++ ++I+SI F ++++A
Sbjct: 764 VSFLLVPSL--PSGFVIFVSIVSINIGVFGYMTLWGVNLDAVSMISIIMSIGFAVDLSAH 821
Query: 382 I 384
I
Sbjct: 822 I 822
>U50191-5|AAK31552.1| 247|Caenorhabditis elegans Tetraspanin family
protein 10 protein.
Length = 247
Score = 31.5 bits (68), Expect = 0.52
Identities = 22/116 (18%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Frame = +1
Query: 250 IAIGVIMLFVSLFGCIGALKESTCLVNIFAVILSIVFILEIAAAITAYSLRSEVSQ---- 417
+A +++ L + L+ ++ L+ + +++++ ++++ + A++ +V+Q
Sbjct: 65 VAAACVLVISFLVATVSVLRHNSFLLKAYCAMVALMIVVQLVDGLLAFTYSDQVNQLASD 124
Query: 418 -FLDKKLREAL-----PLYYQHAEAQDAFDFIQYEL-NCCGVDSYMDWHAVDPPTG 564
F+ + L +A P+ ++A+ F +L CCGV + DW TG
Sbjct: 125 DFMYESLSKAAQKTIPPIGSLSSDAEVQFWANTQDLFGCCGVYNSTDWSVFWGVTG 180
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical protein
F33A8.1 protein.
Length = 897
Score = 30.7 bits (66), Expect = 0.91
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = -2
Query: 384 DGRRDLQNEHDAKDHCENVDQAGTLFQGTDAAEER--DEQHYDANRDDKDSRGEGVWRQE 211
D R+D + +D ++ D+ G + D+ E R D D N+D +D R + R +
Sbjct: 797 DDRKDRSKDRRRQDS-DDEDRKGRE-RREDSGERRRGDRDRRDRNKDQEDHREDRRDRSK 854
Query: 210 ERDVMVDRVNRSTHGDRQCR 151
+R+ DR + DR+ R
Sbjct: 855 DREDRRDRRRHDSDDDRKTR 874
>Z81484-7|CAE11296.1| 221|Caenorhabditis elegans Hypothetical
protein C47A10.7 protein.
Length = 221
Score = 30.7 bits (66), Expect = 0.91
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +1
Query: 202 ISFFLSPYAFSPAIFVIAIGVIMLFVSLFGC 294
+S SPY +S +FVIA VI L V LFGC
Sbjct: 3 LSALSSPYIYSNVLFVIA--VISLPVHLFGC 31
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin protein.
Length = 897
Score = 30.7 bits (66), Expect = 0.91
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = -2
Query: 384 DGRRDLQNEHDAKDHCENVDQAGTLFQGTDAAEER--DEQHYDANRDDKDSRGEGVWRQE 211
D R+D + +D ++ D+ G + D+ E R D D N+D +D R + R +
Sbjct: 797 DDRKDRSKDRRRQDS-DDEDRKGRE-RREDSGERRRGDRDRRDRNKDQEDHREDRRDRSK 854
Query: 210 ERDVMVDRVNRSTHGDRQCR 151
+R+ DR + DR+ R
Sbjct: 855 DREDRRDRRRHDSDDDRKTR 874
>U39678-8|AAK39208.2| 228|Caenorhabditis elegans Hypothetical
protein C39D10.6 protein.
Length = 228
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +1
Query: 145 LTSALTISV-GTTIYAIYHDISFFLSPYAFSPAIFVIAIGVIMLFVSLFG-CIGA 303
+++A +I + G+ ++ ++ + +L PY F I IAI +I+LF+ L +GA
Sbjct: 78 MSTAFSIVIFGSLLFGVWKEKRLYLYPYLFFQVI-SIAISIIVLFIFLISIAVGA 131
>U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical
protein T20F5.6 protein.
Length = 794
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = -2
Query: 384 DGRRDLQNEHDAKDHCENVDQAGTLFQGTDAAEERDEQHYDANRDDKDSRGEGVWRQEER 205
D +R LQ++ + +D F G DAA D+ DAN D+ + E V +E+
Sbjct: 15 DLQRQLQDDMEEFRDMAQMDDFAHPFGGIDAAINVDDPVDDANNDEPAAGAENVLDREDN 74
Query: 204 DVMVDRV 184
+ V
Sbjct: 75 QPQPEAV 81
>AL161712-18|CAC70140.1| 448|Caenorhabditis elegans Hypothetical
protein Y66D12A.23 protein.
Length = 448
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 514 CGVDSYMDWHAV-DPPTGGTGISFANL 591
CG+D Y++ PPTGG GI F +
Sbjct: 367 CGIDWYLEMRRRGQPPTGGFGIGFERM 393
>U88182-2|AAB42308.4| 961|Caenorhabditis elegans Patched related
family protein 5 protein.
Length = 961
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = +1
Query: 226 AFSPAIFVIAIGVIMLFVSLFGC------IGALKESTCLVNIFAVILS 351
++SP++FV AI +++ F L G + AL ES N + V LS
Sbjct: 882 SYSPSVFVAAIFLVVTFGMLHGLLILPTFLAALPESVTTANCYRVFLS 929
>U88167-7|AAB42229.1| 378|Caenorhabditis elegans Hypothetical
protein D2092.2 protein.
Length = 378
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 548 STPPLEGPALALPTSRSPIRAAPS 619
ST + P+ LPT+RSPI +PS
Sbjct: 280 STASPDPPSFVLPTARSPINTSPS 303
>U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin family
protein 16 protein.
Length = 361
Score = 28.7 bits (61), Expect = 3.7
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 14/186 (7%)
Frame = +1
Query: 100 KCIKYMLLCITAIFVLTSALTISVGTTIYAIYHDISFFLSPYAFSPAIF----VIAIGV- 264
+C+K L + ++ + + I VG I + ++SF S + ++ +I +G+
Sbjct: 89 QCLKKCLALLLSVLTMIGSGFI-VGFGIQTL-REVSFTASVIGTNLIVYCPYLLILVGIL 146
Query: 265 --IMLFVSLFGCIGALKESTCLV-NIFAVILSIVFILEIAA--AITAYSLRSEVSQF-LD 426
+M V F I L ++ ++ ++FA I F I A AI Y L S VS ++
Sbjct: 147 SFVMTPVRFFSII--LNDNKIMITHMFATI----FFATICAMTAILGYDLNSHVSSSDME 200
Query: 427 KKLREALPLYYQHAEA---QDAFDFIQYELNCCGVDSYMDWHAVDPPTGGTGISFANLTV 597
++ ++ Y + A + ++ + CCGV + D+ V+ +
Sbjct: 201 HWMKHSIKEDYGNPTAPHIMEEWNKAHRQFKCCGVRNLTDF--VESKWYIMQKKHPRQRI 258
Query: 598 PDSCCA 615
PDSCCA
Sbjct: 259 PDSCCA 264
>Z50027-1|CAA90331.1| 583|Caenorhabditis elegans Hypothetical
protein C39B10.1 protein.
Length = 583
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 91 LGMKC---IKYMLLCITAIFVLTSALTISVGTTIYAIYHDISFFLSPYA 228
LGM C I Y+L C++ + +L SV T IY + I FFL P+A
Sbjct: 83 LGMICFWDIIYLLCCLSTYCI--PSLIYSV-TPIYGPFSYILFFLQPFA 128
>Z78544-5|CAB01759.2| 324|Caenorhabditis elegans Hypothetical
protein K04G11.2 protein.
Length = 324
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 399 KTVGSDGRRDLQNEHDAKDHCENVDQAGTLFQGTDAAEERDEQ 271
KT SDG D++ E D ++ +N Q Q E DE+
Sbjct: 102 KTEDSDGDLDMEGEEDTEELFDNESQPSQRNQSPKETEVEDEK 144
>Z70754-5|CAA94775.1| 304|Caenorhabditis elegans Hypothetical
protein F58E6.5 protein.
Length = 304
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -2
Query: 354 DAKDHCENVDQAGTLFQGTDAAEERDEQHYDANRDDKDSRGEGVWRQEER 205
+A C + LFQG + +E + Q N DD+D +G R + +
Sbjct: 107 NAHKTCTMKHKIAILFQGVNDQKENETQQPTNNDDDEDKDRQGQLRSKSK 156
>Z49125-4|CAA88936.1| 644|Caenorhabditis elegans Hypothetical
protein C47G2.4 protein.
Length = 644
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 163 ISVGTTIYAIYHDISFFLSPYAFSPAIFV 249
++V T + ++ + +FF+ Y SPA FV
Sbjct: 372 VTVFMTFFVLFSECTFFVVSYTLSPAAFV 400
>U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 2 protein.
Length = 1785
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 484 FDFIQYELNCCGVDSY--MDWHAVDPPTGGTGISFANLTVPDSCCAQ 618
F F + GV + +++H V T ++ A+L +PD+ C+Q
Sbjct: 227 FMFFVFSYAIMGVQLFGRLNYHCVVNGTDPNNVTIADLAIPDTMCSQ 273
>DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1763
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 484 FDFIQYELNCCGVDSY--MDWHAVDPPTGGTGISFANLTVPDSCCAQ 618
F F + GV + +++H V T ++ A+L +PD+ C+Q
Sbjct: 205 FMFFVFSYAIMGVQLFGRLNYHCVVNGTDPNNVTIADLAIPDTMCSQ 251
>AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1785
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 484 FDFIQYELNCCGVDSY--MDWHAVDPPTGGTGISFANLTVPDSCCAQ 618
F F + GV + +++H V T ++ A+L +PD+ C+Q
Sbjct: 227 FMFFVFSYAIMGVQLFGRLNYHCVVNGTDPNNVTIADLAIPDTMCSQ 273
>AY398504-1|AAQ96213.1| 324|Caenorhabditis elegans SEL-7 protein.
Length = 324
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 399 KTVGSDGRRDLQNEHDAKDHCENVDQAGTLFQGTDAAEERDEQ 271
KT SDG D++ E D ++ +N Q Q E DE+
Sbjct: 102 KTEDSDGDLDMEGEEDTEELFDNESQPSQRNQSPKETEVEDEK 144
>AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical
protein Y71A12B.11 protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -2
Query: 387 SDGRRDLQNEHDAKDHCENVDQAGTLFQGTDAAEERDEQHYDANRDDKDSRGEGVWRQEE 208
S+G D ++E ++ C D L +DAA+E E+ + + D DS +EE
Sbjct: 180 SEGSDDSEDEEYVEETC--TDALNQLEPESDAADESVEEEEEEDEDSDDSDDSDDSEEEE 237
Query: 207 RD 202
+
Sbjct: 238 AE 239
>AL031265-2|CAE48506.1| 324|Caenorhabditis elegans Hypothetical
protein K04G11.2 protein.
Length = 324
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 399 KTVGSDGRRDLQNEHDAKDHCENVDQAGTLFQGTDAAEERDEQ 271
KT SDG D++ E D ++ +N Q Q E DE+
Sbjct: 102 KTEDSDGDLDMEGEEDTEELFDNESQPSQRNQSPKETEVEDEK 144
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 548 STPPLEGPALALPTSRSPIRAAPSP 622
S PL PAL +P + +P A+P+P
Sbjct: 84 SAIPLAAPALPVPVAAAPFFASPAP 108
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 393 VGSDGRRDLQNEHDAKDHCENVDQAGTLFQGTDAAEERDEQH 268
V G Q+ + +D EN +Q + AAEE D++H
Sbjct: 544 VNQPGPSGSQSNPEPQDEEENAEQQSANSSQSSAAEEEDDEH 585
>U80028-7|AAG23984.1| 370|Caenorhabditis elegans Serpentine
receptor, class w protein124 protein.
Length = 370
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +1
Query: 205 SFFLSPYAFSPAIFVIAIGVIMLFV-----SLFGCIGALKESTCLVNIFAVILSIVFILE 369
SF+++ Y + +I I I ++ LF+ I L + L +IFA ++ I LE
Sbjct: 35 SFYITGYVYEVSILSILINILHLFILTRKSMRTSSINILMAAVALFDIFASLVHIQLFLE 94
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 545 RSTPPLEGPALALPTSRSPIRAAPSP 622
R+ PP G +PT ++P + AP+P
Sbjct: 325 RAAPPQTGRKTLMPTPQAPFQNAPAP 350
>AL023856-7|CAA19563.2| 326|Caenorhabditis elegans Hypothetical
protein Y94A7B.1 protein.
Length = 326
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +1
Query: 202 ISFFLSPYAFSPAIFVIAIGV---IMLFVSLFGCIGALKESTCLVNIFAVILSIVFIL 366
+SFF+ P AF P + +GV I + + C G L LV+I + + +IL
Sbjct: 63 LSFFVQPLAFFPVMAEFPMGVLNRIGMKTDVLMCSGVLIALLVLVSIIKMFKNRYYIL 120
>AF125956-6|AAD14727.2| 158|Caenorhabditis elegans Serpentine
receptor, class h protein77 protein.
Length = 158
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 202 ISFFLSPYAFSPAIFVIAIGVIMLF-VSLFGCIGALKESTCLVNIFAVILSIVFILE 369
+S ++PY F P + A+G++ F VSLF ++ + N ++LS+ +LE
Sbjct: 79 LSLLVTPYIFVPTLSGFAVGLLQYFGVSLF-----VQLWLGIANACVMVLSMTVLLE 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,818,340
Number of Sequences: 27780
Number of extensions: 313727
Number of successful extensions: 1150
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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