Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2f14
         (790 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   1.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   1.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   3.7  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   6.4  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.5  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   8.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 11  PTRGRSARPYSRPRPTRRAPAMFDV 85
           PTR +S +    P P +R+P++ D+
Sbjct: 685 PTRDKSKQNEKSPSPQQRSPSVTDL 709


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 126 HTESSLRSPFTEPKTSNMAGARRVGRGREY 37
           HT  +   P+    T    G  R+ RGR+Y
Sbjct: 321 HTTVNEAQPYVRNTTVPTQGVARMSRGRQY 350


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 126 HTESSLRSPFTEPKTSNMAGARRVGRGREY 37
           HT  +   P+    T    G  R+ RGR+Y
Sbjct: 269 HTTVNEAQPYVRNTTVPTQGVARMSRGRQY 298


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 9   TRHEDVA-HVRTHDRDRRAARPPC 77
           TR +++  H+RTH  ++R A P C
Sbjct: 357 TRSDELQRHLRTHTGEKRFACPIC 380


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 613 LYM*SSQLYQRSGSKYSSWTSF 678
           +Y    + Y+ SGS Y+ W+ F
Sbjct: 216 IYKVLEEKYKTSGSLYTCWSEF 237


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +2

Query: 599 YAFRFFICEVLNFINVVG 652
           +AF+  +C  +NF+ ++G
Sbjct: 154 FAFQVLMCTSMNFVLLIG 171


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 652 SKYSSWTSFWTENFQL 699
           S YS WT  W ++ Q+
Sbjct: 289 SFYSDWTRVWLDDAQV 304


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 304 RDGESRVYPAVRVHNGERDFINDAV 230
           RDG  R    V   N  R+FI  A+
Sbjct: 258 RDGSHRFSTMVSSANRRREFIRSAI 282


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +3

Query: 585 TLKTFTLSDSLYVKFSTLST*WVKIFFMDFFLDGEFSTYGSDV 713
           T+  + L+    ++F  +S  WV I     F++     YGS +
Sbjct: 118 TMSFYVLNFFGSIQFIIISKHWVTIMKEWSFMEMSMRNYGSSI 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,320
Number of Sequences: 336
Number of extensions: 4632
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)