Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2f13
(493 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006840-1|AAP35486.1| 370|Homo sapiens phosphoserine aminotran... 83 5e-16
BC018129-1|AAH18129.1| 370|Homo sapiens phosphoserine aminotran... 83 5e-16
BC004863-1|AAH04863.1| 370|Homo sapiens phosphoserine aminotran... 83 5e-16
BC000971-1|AAH00971.1| 370|Homo sapiens phosphoserine aminotran... 83 5e-16
AY131232-1|AAN71736.1| 370|Homo sapiens phosphoserine aminotran... 83 5e-16
AL353594-2|CAI16883.1| 324|Homo sapiens phosphoserine aminotran... 83 5e-16
AL353594-1|CAI16882.1| 370|Homo sapiens phosphoserine aminotran... 83 5e-16
AF113132-1|AAD42052.1| 324|Homo sapiens phosphoserine aminotran... 83 5e-16
BC016645-1|AAH16645.1| 370|Homo sapiens phosphoserine aminotran... 82 1e-15
Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 30 3.8
X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 30 3.8
AC073149-2|AAY24061.1| 365|Homo sapiens unknown protein. 30 3.8
BC101321-1|AAI01322.1| 362|Homo sapiens SLC35F4 protein protein. 29 8.8
BC101320-1|AAI01321.1| 362|Homo sapiens SLC35F4 protein protein. 29 8.8
BC101318-1|AAI01319.1| 362|Homo sapiens SLC35F4 protein protein. 29 8.8
>BT006840-1|AAP35486.1| 370|Homo sapiens phosphoserine
aminotransferase protein.
Length = 370
Score = 83.0 bits (196), Expect = 5e-16
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Frame = +2
Query: 125 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 304
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 305 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYV 409
VPDNYKV VPLNLI + G ADYV
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYV 102
>BC018129-1|AAH18129.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 83.0 bits (196), Expect = 5e-16
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Frame = +2
Query: 125 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 304
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 305 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYV 409
VPDNYKV VPLNLI + G ADYV
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYV 102
>BC004863-1|AAH04863.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 83.0 bits (196), Expect = 5e-16
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Frame = +2
Query: 125 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 304
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 305 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYV 409
VPDNYKV VPLNLI + G ADYV
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYV 102
>BC000971-1|AAH00971.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 83.0 bits (196), Expect = 5e-16
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Frame = +2
Query: 125 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 304
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 305 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYV 409
VPDNYKV VPLNLI + G ADYV
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYV 102
>AY131232-1|AAN71736.1| 370|Homo sapiens phosphoserine
aminotransferase protein.
Length = 370
Score = 83.0 bits (196), Expect = 5e-16
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Frame = +2
Query: 125 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 304
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 305 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYV 409
VPDNYKV VPLNLI + G ADYV
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYV 102
>AL353594-2|CAI16883.1| 324|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 324
Score = 83.0 bits (196), Expect = 5e-16
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Frame = +2
Query: 125 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 304
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 305 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYV 409
VPDNYKV VPLNLI + G ADYV
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYV 102
>AL353594-1|CAI16882.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 83.0 bits (196), Expect = 5e-16
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Frame = +2
Query: 125 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 304
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 305 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYV 409
VPDNYKV VPLNLI + G ADYV
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYV 102
>AF113132-1|AAD42052.1| 324|Homo sapiens phosphoserine
aminotransferase protein.
Length = 324
Score = 83.0 bits (196), Expect = 5e-16
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Frame = +2
Query: 125 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 304
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 305 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYV 409
VPDNYKV VPLNLI + G ADYV
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYV 102
>BC016645-1|AAH16645.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 81.8 bits (193), Expect = 1e-15
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Frame = +2
Query: 125 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 304
+V NFG GPAKLP V I+ EL +++ GIS++E SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVVEMSHRSSDFAKIINNTENLVRELLA 65
Query: 305 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYV 409
VPDNYKV VPLNLI + G ADYV
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYV 102
>Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV
protein.
Length = 1690
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 443 LGCXSRPRTC*LHNQQYQFWILSLKEQLQIDQDP 342
L C R TC +Y FW+ ++K LQ P
Sbjct: 1632 LECQGRQGTCHFFANKYSFWLTTVKADLQFSSAP 1665
>X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 chain
protein.
Length = 1690
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 443 LGCXSRPRTC*LHNQQYQFWILSLKEQLQIDQDP 342
L C R TC +Y FW+ ++K LQ P
Sbjct: 1632 LECQGRQGTCHFFANKYSFWLTTVKADLQFSSAP 1665
>AC073149-2|AAY24061.1| 365|Homo sapiens unknown protein.
Length = 365
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 443 LGCXSRPRTC*LHNQQYQFWILSLKEQLQIDQDP 342
L C R TC +Y FW+ ++K LQ P
Sbjct: 307 LECQGRQGTCHFFANKYSFWLTTVKADLQFSSAP 340
>BC101321-1|AAI01322.1| 362|Homo sapiens SLC35F4 protein protein.
Length = 362
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 165 SGNLAGPAPKLNTLDIFTYLFI*LIPTLHYFTKRHYRSQTCRGTMWFCL 19
S N A ++TL F +FI P + YFTK + S + W CL
Sbjct: 197 SANFGEAAHFVSTLGFFNLIFISFTPVILYFTKVEHWS-SFAALPWGCL 244
>BC101320-1|AAI01321.1| 362|Homo sapiens SLC35F4 protein protein.
Length = 362
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 165 SGNLAGPAPKLNTLDIFTYLFI*LIPTLHYFTKRHYRSQTCRGTMWFCL 19
S N A ++TL F +FI P + YFTK + S + W CL
Sbjct: 197 SANFGEAAHFVSTLGFFNLIFISFTPVILYFTKVEHWS-SFAALPWGCL 244
>BC101318-1|AAI01319.1| 362|Homo sapiens SLC35F4 protein protein.
Length = 362
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 165 SGNLAGPAPKLNTLDIFTYLFI*LIPTLHYFTKRHYRSQTCRGTMWFCL 19
S N A ++TL F +FI P + YFTK + S + W CL
Sbjct: 197 SANFGEAAHFVSTLGFFNLIFISFTPVILYFTKVEHWS-SFAALPWGCL 244
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,360,053
Number of Sequences: 237096
Number of extensions: 1118713
Number of successful extensions: 1988
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1988
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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