Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2f13
         (493 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ062790-1|AAY56663.1|  364|Drosophila melanogaster unknown prot...    94   1e-19
AY119560-1|AAM50214.1|  364|Drosophila melanogaster GM02605p pro...    94   1e-19
AE014297-4350|AAF56874.1|  364|Drosophila melanogaster CG11899-P...    94   1e-19
X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of ...    28   7.9  
AY118600-1|AAM49969.1|  354|Drosophila melanogaster LP03104p pro...    28   7.9  
AY069181-1|AAL39326.1| 1131|Drosophila melanogaster GH22805p pro...    28   7.9  
AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA...    28   7.9  
AE014296-2376|AAF49747.2|  354|Drosophila melanogaster CG7906-PA...    28   7.9  
AE013599-2032|AAM68528.1| 1078|Drosophila melanogaster CG34123-P...    28   7.9  
AE013599-2031|AAF58153.2| 1131|Drosophila melanogaster CG34123-P...    28   7.9  
AE013599-2030|ABI31097.1| 1921|Drosophila melanogaster CG34123-P...    28   7.9  

>DQ062790-1|AAY56663.1|  364|Drosophila melanogaster unknown
           protein.
          Length = 364

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 47/94 (50%), Positives = 58/94 (61%)
 Frame = +2

Query: 128 VFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLDV 307
           V NF AGPAKLPEEV + ++  L N   SGIS++E SHRSS Y K++      +R LL+V
Sbjct: 2   VINFAAGPAKLPEEVLKEVQENLVNCNGSGISVMEMSHRSSNYAKIHDATISDLRELLNV 61

Query: 308 PDNYKVXXXXXXXXXXXXXVPLNLISRTGTADYV 409
           P NYK+             V LNLI +TGTADYV
Sbjct: 62  PSNYKILLMQGGGTGQFAAVALNLIGKTGTADYV 95


>AY119560-1|AAM50214.1|  364|Drosophila melanogaster GM02605p
           protein.
          Length = 364

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 47/94 (50%), Positives = 58/94 (61%)
 Frame = +2

Query: 128 VFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLDV 307
           V NF AGPAKLPEEV + ++  L N   SGIS++E SHRSS Y K++      +R LL+V
Sbjct: 2   VINFAAGPAKLPEEVLKEVQENLVNCNGSGISVMEMSHRSSNYAKIHDATISDLRELLNV 61

Query: 308 PDNYKVXXXXXXXXXXXXXVPLNLISRTGTADYV 409
           P NYK+             V LNLI +TGTADYV
Sbjct: 62  PSNYKILLMQGGGTGQFAAVALNLIGKTGTADYV 95


>AE014297-4350|AAF56874.1|  364|Drosophila melanogaster CG11899-PA
           protein.
          Length = 364

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 47/94 (50%), Positives = 58/94 (61%)
 Frame = +2

Query: 128 VFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLDV 307
           V NF AGPAKLPEEV + ++  L N   SGIS++E SHRSS Y K++      +R LL+V
Sbjct: 2   VINFAAGPAKLPEEVLKEVQENLVNCNGSGISVMEMSHRSSNYAKIHDATISDLRELLNV 61

Query: 308 PDNYKVXXXXXXXXXXXXXVPLNLISRTGTADYV 409
           P NYK+             V LNLI +TGTADYV
Sbjct: 62  PSNYKILLMQGGGTGQFAAVALNLIGKTGTADYV 95


>X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of
           variegation protein3-7 protein.
          Length = 1169

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 353 DQDPHQLKTALCSCPVHLISFAQHPEFR 270
           D +P Q +  LC+C + + SF +H + R
Sbjct: 336 DTNPQQCRCTLCNCTMAITSFLRHCKTR 363


>AY118600-1|AAM49969.1|  354|Drosophila melanogaster LP03104p
           protein.
          Length = 354

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 214 WN*FIGNKSSFFNIHEAKCRNSGCCAK 294
           WN F   K+ F  +H+A+C+N+  C K
Sbjct: 325 WNCF-NTKNVFHQVHDAECQNTITCYK 350


>AY069181-1|AAL39326.1| 1131|Drosophila melanogaster GH22805p
           protein.
          Length = 1131

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 116 KMSKVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHR 244
           K+ K     A    L  E+YE +++    FE+ G  LL+ S+R
Sbjct: 607 KLYKAMAHEAAEDDLDTEIYEELRSYAKEFESKGNKLLDFSYR 649


>AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA
           protein.
          Length = 1250

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 353 DQDPHQLKTALCSCPVHLISFAQHPEFR 270
           D +P Q +  LC+C + + SF +H + R
Sbjct: 417 DTNPQQCRCTLCNCTMAITSFLRHCKTR 444


>AE014296-2376|AAF49747.2|  354|Drosophila melanogaster CG7906-PA
           protein.
          Length = 354

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 214 WN*FIGNKSSFFNIHEAKCRNSGCCAK 294
           WN F   K+ F  +H+A+C+N+  C K
Sbjct: 325 WNCF-NTKNVFHQVHDAECQNTITCYK 350


>AE013599-2032|AAM68528.1| 1078|Drosophila melanogaster CG34123-PC,
           isoform C protein.
          Length = 1078

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 116 KMSKVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHR 244
           K+ K     A    L  E+YE +++    FE+ G  LL+ S+R
Sbjct: 607 KLYKAMAHEAAEDDLDTEIYEELRSYAKEFESKGNKLLDFSYR 649


>AE013599-2031|AAF58153.2| 1131|Drosophila melanogaster CG34123-PB,
           isoform B protein.
          Length = 1131

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 116 KMSKVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHR 244
           K+ K     A    L  E+YE +++    FE+ G  LL+ S+R
Sbjct: 607 KLYKAMAHEAAEDDLDTEIYEELRSYAKEFESKGNKLLDFSYR 649


>AE013599-2030|ABI31097.1| 1921|Drosophila melanogaster CG34123-PD,
           isoform D protein.
          Length = 1921

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 116 KMSKVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHR 244
           K+ K     A    L  E+YE +++    FE+ G  LL+ S+R
Sbjct: 607 KLYKAMAHEAAEDDLDTEIYEELRSYAKEFESKGNKLLDFSYR 649


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,579,041
Number of Sequences: 53049
Number of extensions: 341349
Number of successful extensions: 714
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)