Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2f09
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    28   0.33 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    28   0.33 
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   9.5  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 150 PFGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLTQQPEP 272
           P  KPT  A P RF P         ++++ F L   Q P+P
Sbjct: 124 PIPKPTPEAEPVRFDPS--------VLRRNFALKTAQTPDP 156


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 150 PFGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLTQQPEP 272
           P  KPT  A P RF P         ++++ F L   Q P+P
Sbjct: 129 PIPKPTPEAEPVRFDPS--------VLRRNFALKTAQTPDP 161


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -1

Query: 177 VLTMLVFQMGRWSLMCTLYRLYRLSNT 97
           + TM++  +  W+ +C L   YR ++T
Sbjct: 313 LFTMILVSLSVWTTVCVLNVWYRSTST 339


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,648
Number of Sequences: 2352
Number of extensions: 15008
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)