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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt2f01
         (527 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P34842 Cluster: Cytochrome c oxidase subunit 3; n=18; c...   254   1e-66
UniRef50_P14574 Cluster: Cytochrome c oxidase subunit 3; n=118; ...   239   2e-62
UniRef50_P00414 Cluster: Cytochrome c oxidase subunit 3; n=659; ...   224   1e-57
UniRef50_Q8W9N0 Cluster: Cytochrome c oxidase subunit 3; n=13; c...   222   5e-57
UniRef50_P18945 Cluster: Cytochrome c oxidase subunit 3; n=78; E...   219   3e-56
UniRef50_O99822 Cluster: Cytochrome c oxidase subunit 3; n=24; c...   198   5e-50
UniRef50_Q402M5 Cluster: Cytochrome c oxidase subunit 3; n=6; Co...   193   2e-48
UniRef50_P92514 Cluster: Cytochrome c oxidase subunit 3; n=551; ...   192   3e-48
UniRef50_P34843 Cluster: Cytochrome c oxidase subunit 3; n=18; P...   188   5e-47
UniRef50_Q37374 Cluster: Cytochrome c oxidase subunit 3; n=5; Eu...   178   7e-44
UniRef50_Q4W8D5 Cluster: Cytochrome c oxidase subunit 3; n=14; A...   176   2e-43
UniRef50_Q699N4 Cluster: Cytochrome c oxidase subunit 3; n=4; Ne...   175   7e-43
UniRef50_O99810 Cluster: Cytochrome c oxidase subunit 3; n=6; Ar...   173   3e-42
UniRef50_A7UG17 Cluster: Cytochrome oxidase subunit 3; n=1; Phae...   172   4e-42
UniRef50_Q6SL39 Cluster: Cytochrome c oxidase subunit 3; n=1; Ar...   169   5e-41
UniRef50_P24891 Cluster: Cytochrome c oxidase subunit 3; n=7; Ch...   169   5e-41
UniRef50_Q2FBN9 Cluster: Cytochrome c oxidase subunit 3; n=1; Pe...   166   3e-40
UniRef50_Q3T4A3 Cluster: Cytochrome c oxidase subunit 3; n=3; Fu...   164   1e-39
UniRef50_P14575 Cluster: Cytochrome c oxidase subunit 3; n=14; A...   163   3e-39
UniRef50_Q697G9 Cluster: Cytochrome c oxidase subunit 3; n=5; Al...   161   1e-38
UniRef50_Q9B8G8 Cluster: Cytochrome c oxidase subunit 3; n=3; Bo...   159   5e-38
UniRef50_Q85MB7 Cluster: Cytochrome c oxidase subunit 3; n=10; F...   157   2e-37
UniRef50_Q6ED55 Cluster: Cytochrome c oxidase subunit 3; n=1; Ca...   156   3e-37
UniRef50_Q674Q1 Cluster: Cytochrome c oxidase subunit 3; n=3; Al...   156   3e-37
UniRef50_Q9B6D8 Cluster: Cytochrome c oxidase subunit 3; n=3; As...   156   3e-37
UniRef50_Q2GD92 Cluster: Cytochrome c oxidase, subunit III; n=1;...   152   4e-36
UniRef50_Q5LNY0 Cluster: Cytochrome c oxidase, subunit III; n=14...   149   5e-35
UniRef50_Q0H2E5 Cluster: Cytochrome c oxidase subunit 3; n=1; Pr...   146   3e-34
UniRef50_Q9I724 Cluster: Cytochrome c oxidase, subunit III; n=13...   145   5e-34
UniRef50_Q766W8 Cluster: Cytochrome c oxidase subunit 3; n=1; Va...   144   1e-33
UniRef50_Q5P2E8 Cluster: Cytochrome c oxidase, subunit III; n=2;...   142   3e-33
UniRef50_Q2I6Z0 Cluster: Cytochrome c oxidase subunit 3; n=1; Lo...   141   1e-32
UniRef50_P00420 Cluster: Cytochrome c oxidase subunit 3; n=18; A...   139   3e-32
UniRef50_Q0QJ94 Cluster: Cytochrome c oxidase subunit 3; n=1; Xe...   138   6e-32
UniRef50_Q6TY89 Cluster: Cytochrome c oxidase subunit 3; n=1; Xi...   138   7e-32
UniRef50_A3VNW6 Cluster: Cytochrome c oxidase, subunit III; n=1;...   137   1e-31
UniRef50_P41775 Cluster: Cytochrome c oxidase subunit 3; n=132; ...   135   5e-31
UniRef50_Q9T6M2 Cluster: Cytochrome c oxidase subunit 3; n=1; Gl...   135   7e-31
UniRef50_Q1AGW8 Cluster: Cytochrome c oxidase subunit 3; n=3; Me...   133   2e-30
UniRef50_Q12E42 Cluster: Cytochrome c oxidase, subunit III; n=11...   133   3e-30
UniRef50_Q2GLU5 Cluster: Cytochrome c oxidase, subunit III; n=11...   130   1e-29
UniRef50_Q06SA4 Cluster: Cytochrome c oxidase subunit 3; n=1; Ac...   130   1e-29
UniRef50_Q8HEI3 Cluster: Cytochrome c oxidase subunit 3; n=2; Va...   129   3e-29
UniRef50_Q06SB4 Cluster: Cytochrome c oxidase subunit 3; n=1; Hi...   129   3e-29
UniRef50_Q1YUZ2 Cluster: Cytochrome c oxidase subunit III; n=1; ...   127   1e-28
UniRef50_Q2HJM2 Cluster: Cytochrome c oxidase subunit 3; n=1; Gl...   126   2e-28
UniRef50_Q4KRY0 Cluster: Cytochrome c oxidase subunit 3; n=2; Cr...   125   6e-28
UniRef50_Q9MD26 Cluster: Cytochrome oxidase subunit 3; n=1; Scen...   124   2e-27
UniRef50_Q2LMM5 Cluster: Cytochrome c oxidase subunit 3; n=1; Ha...   124   2e-27
UniRef50_Q5W901 Cluster: Cytochrome c oxidase subunit 3; n=1; Li...   119   5e-26
UniRef50_A2TN48 Cluster: Cytochrome c oxidase subunit 3; n=6; Me...   119   5e-26
UniRef50_Q21PS6 Cluster: Cytochrome c oxidase, subunit III; n=3;...   118   6e-26
UniRef50_A0Z309 Cluster: Cytochrome c oxidase, subunit III; n=3;...   118   8e-26
UniRef50_Q950M9 Cluster: Cytochrome c oxidase subunit 3; n=1; Rh...   116   4e-25
UniRef50_Q5K5G0 Cluster: Cytochrome c oxidase subunit 3; n=9; Em...   114   1e-24
UniRef50_Q7YF37 Cluster: Cytochrome c oxidase subunit 3; n=4; Ve...   105   5e-22
UniRef50_Q7NIM1 Cluster: Cytochrome c oxidase subunit III; n=1; ...   101   8e-21
UniRef50_A3KCM4 Cluster: Cytochrome c oxidase subunit 3; n=15; P...   101   8e-21
UniRef50_Q9XKD9 Cluster: Cytochrome c oxidase subunit 3; n=1; Di...    98   1e-19
UniRef50_Q9B8A6 Cluster: Cytochrome c oxidase subunit 3; n=1; Tr...    97   2e-19
UniRef50_Q3AWK7 Cluster: Possible cytochrome c oxidase subunit I...    95   9e-19
UniRef50_Q5V2C4 Cluster: Cytochrome c oxidase polypeptide III; n...    94   2e-18
UniRef50_A4UCW1 Cluster: Cytochrome c oxidase subunit 3; n=12; M...    93   3e-18
UniRef50_Q1HBC1 Cluster: Cytochrome c oxidase subunit 3; n=1; St...    93   5e-18
UniRef50_Q06475 Cluster: Cytochrome c oxidase subunit 3 (EC 1.9....    93   5e-18
UniRef50_Q0I8U0 Cluster: Cytochrome c oxidase subunit III; n=10;...    90   3e-17
UniRef50_Q8YTI3 Cluster: Cytochrome c oxidase subunit III; n=11;...    89   8e-17
UniRef50_O21049 Cluster: Cytochrome oxidase subunit 3; n=9; Euka...    88   1e-16
UniRef50_Q64LI8 Cluster: Cytochrome c oxidase subunit 3; n=1; Mi...    87   2e-16
UniRef50_Q6NGA0 Cluster: Cytochrome c oxidase subunit 3; n=46; A...    86   5e-16
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ...    85   7e-16
UniRef50_Q36635 Cluster: Cytochrome c oxidase subunit 3; n=3; Em...    82   7e-15
UniRef50_Q9FV97 Cluster: Cytochrome c oxidase subunit III; n=2; ...    81   1e-14
UniRef50_Q5DNB4 Cluster: Cytochrome c oxidase subunit 3; n=1; Le...    81   2e-14
UniRef50_P50677 Cluster: Cytochrome c oxidase subunit 3 (EC 1.9....    81   2e-14
UniRef50_P73908 Cluster: Cytochrome c oxidase subunit III; n=2; ...    79   5e-14
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D...    73   4e-12
UniRef50_Q01PD0 Cluster: Cytochrome c oxidase, subunit III; n=1;...    73   5e-12
UniRef50_Q1YMX1 Cluster: Putative cytochrome c oxidase subunit I...    72   9e-12
UniRef50_Q0SHM9 Cluster: Cytochrome c oxidase; n=7; Actinobacter...    72   9e-12
UniRef50_Q0LFY5 Cluster: Cytochrome c oxidase, subunit III; n=1;...    71   1e-11
UniRef50_Q67ML0 Cluster: Cytochrome C oxidase subunit III; n=3; ...    71   2e-11
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|...    69   5e-11
UniRef50_Q9G8R7 Cluster: Cytochrome c oxidase subunit 3; n=1; Na...    69   7e-11
UniRef50_A7BSH5 Cluster: Cytochrome c oxidase aa3, subunit III; ...    69   9e-11
UniRef50_Q12MS5 Cluster: Cytochrome c oxidase, subunit III; n=2;...    67   3e-10
UniRef50_A3JBU2 Cluster: Cytochrome c oxidase subunit III family...    66   4e-10
UniRef50_P24012 Cluster: Cytochrome c oxidase subunit 3 (EC 1.9....    66   5e-10
UniRef50_A4BMN0 Cluster: Putative additional subunit of nitric o...    65   1e-09
UniRef50_Q8D352 Cluster: CyoC protein; n=1; Wigglesworthia gloss...    64   1e-09
UniRef50_UPI0000DAE542 Cluster: hypothetical protein Rgryl_01000...    64   3e-09
UniRef50_Q70US2 Cluster: Cytochrome c oxidase subunit 3; n=3; On...    63   4e-09
UniRef50_A6GFM9 Cluster: Cytochrome C oxidase subunit III; n=1; ...    62   1e-08
UniRef50_Q83GL6 Cluster: Cytochrome c oxidase subunit III; n=2; ...    61   2e-08
UniRef50_A0G8T4 Cluster: Cytochrome c oxidase, subunit III; n=6;...    61   2e-08
UniRef50_Q5MCM5 Cluster: Cytochrome c oxidase subunit 3; n=541; ...    60   2e-08
UniRef50_Q9F3S7 Cluster: Cytochrome oxidase subunit III; n=3; Ba...    60   2e-08
UniRef50_Q9MLI1 Cluster: Cytochrome c oxidase subunit 3; n=3; Di...    60   2e-08
UniRef50_Q36675 Cluster: Cytochrome c oxidase subunit 3; n=46; H...    60   4e-08
UniRef50_Q2IP50 Cluster: Cytochrome c oxidase, subunit III; n=1;...    59   5e-08
UniRef50_A3TK93 Cluster: Cytochrome C oxidase subunit III; n=1; ...    59   5e-08
UniRef50_A2T843 Cluster: Cytochrome c oxidase subunit 3; n=18; E...    59   5e-08
UniRef50_A2D6E2 Cluster: Cytochrome c oxidase subunit 3; n=2; Gy...    59   5e-08
UniRef50_O67932 Cluster: Cytochrome c oxidase subunit III; n=1; ...    58   1e-07
UniRef50_Q1D5M6 Cluster: Cytochrome c oxidase, subunit III; n=1;...    57   2e-07
UniRef50_A4A2K1 Cluster: Cytochrome C oxidase subunit III; n=1; ...    56   5e-07
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=...    56   5e-07
UniRef50_Q482H7 Cluster: Cytochrome c oxidase subunit III family...    56   7e-07
UniRef50_A1ZL80 Cluster: Cytochrome c oxidase subunit III; n=3; ...    56   7e-07
UniRef50_A4AQT5 Cluster: Putative additional subunit of nitric o...    55   9e-07
UniRef50_Q0A6S9 Cluster: Cytochrome c oxidase, subunit III; n=1;...    55   1e-06
UniRef50_A6DSP2 Cluster: Cytochrome c oxidase subunit III; n=1; ...    55   1e-06
UniRef50_Q057F0 Cluster: Cytochrome o ubiquinol oxidase subunit ...    54   2e-06
UniRef50_Q1I0P3 Cluster: Cytochrome c oxidase subunit 3; n=3; Sc...    54   2e-06
UniRef50_Q83CR9 Cluster: Cytochrome o ubiquinol oxidase, subunit...    54   3e-06
UniRef50_Q6MR13 Cluster: Cytochrome c oxidase subunit III; n=5; ...    54   3e-06
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha...    54   3e-06
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol...    54   3e-06
UniRef50_Q1ZQK0 Cluster: Cytochrome c oxidase, subunit III; n=13...    52   6e-06
UniRef50_P14546 Cluster: Cytochrome c oxidase subunit 3; n=10; T...    52   6e-06
UniRef50_A3ZTG4 Cluster: Cytochrome c oxidase subunit III; n=1; ...    52   8e-06
UniRef50_A1VD48 Cluster: Cytochrome c oxidase, subunit III; n=4;...    52   8e-06
UniRef50_Q1NH56 Cluster: Putative uncharacterized protein; n=1; ...    51   1e-05
UniRef50_A7H8L5 Cluster: Cytochrome c oxidase subunit III; n=3; ...    51   2e-05
UniRef50_A6C0L4 Cluster: Cytochrome c oxidase, subunit III; n=1;...    51   2e-05
UniRef50_A3HZ93 Cluster: Cytochrome c oxidase subunit III; n=1; ...    51   2e-05
UniRef50_Q8L310 Cluster: Cytochrome bo subunit C; n=1; Vitreosci...    50   3e-05
UniRef50_A4YP22 Cluster: NorE protein involved in nitric oxide r...    50   3e-05
UniRef50_Q37355 Cluster: Cytochrome c oxidase subunit 3; n=1; Tr...    50   3e-05
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;...    50   3e-05
UniRef50_Q62BW6 Cluster: Cytochrome c oxidase, subunit III famil...    50   4e-05
UniRef50_A7HEB8 Cluster: Cytochrome c oxidase subunit III; n=1; ...    50   4e-05
UniRef50_Q6LKB9 Cluster: Hypothetical cytochrome c oxidase subun...    49   6e-05
UniRef50_P34958 Cluster: Quinol oxidase subunit 3 (EC 1.10.3.-) ...    49   6e-05
UniRef50_A4T660 Cluster: Cytochrome c oxidase, subunit III; n=1;...    49   8e-05
UniRef50_Q1H1C2 Cluster: Cytochrome c oxidase, subunit III; n=1;...    48   1e-04
UniRef50_A6EM80 Cluster: Cytochrome c oxidase, subunit III; n=1;...    48   1e-04
UniRef50_A2TZH2 Cluster: Probable cytochrome-c oxidase transmemb...    48   1e-04
UniRef50_Q1IMA5 Cluster: Cytochrome c oxidase, subunit III; n=1;...    48   1e-04
UniRef50_A7J1K6 Cluster: Cytochrome c oxidase subunit III; n=5; ...    48   1e-04
UniRef50_Q02BQ7 Cluster: Cytochrome c oxidase, subunit III; n=1;...    48   2e-04
UniRef50_A1T3A7 Cluster: Cytochrome c oxidase, subunit III; n=3;...    48   2e-04
UniRef50_Q45236 Cluster: Cytochrome-c oxidase; n=25; Bacteria|Re...    47   2e-04
UniRef50_A1W9J3 Cluster: Cytochrome c oxidase, subunit III; n=69...    47   2e-04
UniRef50_Q9I425 Cluster: Cytochrome o ubiquinol oxidase subunit ...    47   2e-04
UniRef50_Q89AA5 Cluster: Cytochrome o ubiquinol oxidase subunit ...    47   2e-04
UniRef50_Q5P8Y3 Cluster: Putative additional subunit of nitric o...    47   3e-04
UniRef50_Q26HL4 Cluster: Cytochrome oxidase subunit III; n=13; B...    47   3e-04
UniRef50_A1ZL91 Cluster: Cytochrome c oxidase subunit III, putat...    47   3e-04
UniRef50_Q2IK65 Cluster: Cytochrome c oxidase, subunit III; n=1;...    46   4e-04
UniRef50_A1ZL81 Cluster: CytoChrome c oxidase polypeptide III (C...    46   4e-04
UniRef50_Q6F9R3 Cluster: Cytochrome o ubiquinol oxidase subunit ...    46   5e-04
UniRef50_Q3JBP9 Cluster: Cytochrome/quinol oxidase subunit 3; n=...    46   7e-04
UniRef50_A7CY74 Cluster: Putative uncharacterized protein; n=1; ...    46   7e-04
UniRef50_A6H1E6 Cluster: Cytochrome c oxidase family protein; n=...    46   7e-04
UniRef50_A1UJP9 Cluster: Cytochrome c oxidase, subunit III; n=5;...    46   7e-04
UniRef50_Q34135 Cluster: Cytochrome c oxidase subunit 3; n=9; Ca...    45   0.001
UniRef50_A3QRI5 Cluster: Cytochrome c oxidase subunit 3; n=1; Mi...    45   0.001
UniRef50_A4U0D0 Cluster: Cytochrome c oxidase subunit III; n=3; ...    44   0.002
UniRef50_Q12MR6 Cluster: Cytochrome c oxidase, subunit III; n=1;...    44   0.002
UniRef50_A3HUQ8 Cluster: Probable cytochrome-c oxidase transmemb...    44   0.002
UniRef50_Q46SU6 Cluster: Cytochrome c oxidase, subunit III; n=1;...    44   0.003
UniRef50_Q32YM4 Cluster: Cytochrome c oxidase subunit 3; n=1; Ps...    44   0.003
UniRef50_Q6MBY4 Cluster: Probable cytochrome o ubiquinol oxidase...    43   0.004
UniRef50_Q2KJN9 Cluster: NirO; n=11; Pseudomonas|Rep: NirO - Pse...    43   0.004
UniRef50_Q74GM6 Cluster: Cytochrome c oxidase, subunit III; n=4;...    43   0.005
UniRef50_A7HEB4 Cluster: Cytochrome c oxidase subunit III; n=1; ...    43   0.005
UniRef50_Q9A7F2 Cluster: Ubiquinol oxidase subunit III; n=5; cel...    42   0.007
UniRef50_A0GZ74 Cluster: Cytochrome c oxidase, subunit III; n=2;...    42   0.007
UniRef50_Q36098 Cluster: Cytochrome c oxidase subunit 3; n=2; Th...    42   0.007
UniRef50_A6EAK8 Cluster: Cytochrome c oxidase, subunit III; n=1;...    42   0.009
UniRef50_A7DFN3 Cluster: Cytochrome c oxidase, subunit III precu...    42   0.012
UniRef50_Q51666 Cluster: NorE protein; n=7; Rhodobacteraceae|Rep...    41   0.015
UniRef50_Q2JYD3 Cluster: Nitric oxide reductase protein; n=1; Rh...    41   0.020
UniRef50_P57542 Cluster: Cytochrome o ubiquinol oxidase subunit ...    40   0.035
UniRef50_Q11CH0 Cluster: Cytochrome c oxidase, subunit III precu...    40   0.047
UniRef50_A4CG88 Cluster: Cytochrome o ubiquinol oxidase subunit ...    40   0.047
UniRef50_Q92Z14 Cluster: NorE protein involved in nitric oxide r...    39   0.062
UniRef50_Q48A74 Cluster: Cytochrome c oxidase subunit III family...    39   0.062
UniRef50_Q1IUK5 Cluster: Cytochrome c oxidase subunit III; n=2; ...    38   0.11 
UniRef50_Q576W5 Cluster: Cytochrome c oxidase, subunit III; n=9;...    38   0.14 
UniRef50_A6CA08 Cluster: Cytochrome oxidase subunit III; n=1; Pl...    38   0.14 
UniRef50_Q7UI89 Cluster: Cytochrome oxidase subunit III; n=1; Pi...    38   0.19 
UniRef50_A3K371 Cluster: Cytochrome o ubiquinol oxidase subunit ...    37   0.25 
UniRef50_Q4RB68 Cluster: Chromosome undetermined SCAF22168, whol...    37   0.33 
UniRef50_Q01RA0 Cluster: Cytochrome c oxidase, subunit III; n=1;...    37   0.33 
UniRef50_A1ULE6 Cluster: Cytochrome c oxidase, subunit III precu...    37   0.33 
UniRef50_A4YQP7 Cluster: Cytochrome o ubiquinol oxidase, subunit...    36   0.58 
UniRef50_A0YDD4 Cluster: Cytochrome c oxidase subunit III; n=1; ...    36   0.76 
UniRef50_Q6G520 Cluster: Cytochrome o ubiquinol oxidase subunit ...    35   1.0  
UniRef50_Q2K1Y9 Cluster: Putative cytochrome c oxidase subunit I...    35   1.0  
UniRef50_Q1IQ26 Cluster: Heme/copper-type cytochrome/quinol oxid...    35   1.0  
UniRef50_A6FB27 Cluster: Cytochrome c oxidase subunit III; n=1; ...    35   1.0  
UniRef50_Q0F918 Cluster: Fatty acid desaturase family protein; n...    35   1.3  
UniRef50_Q8I5M6 Cluster: Putative uncharacterized protein; n=4; ...    34   2.3  
UniRef50_A4A0M6 Cluster: Cytochrome oxidase subunit III; n=1; Bl...    33   4.1  
UniRef50_Q62KR1 Cluster: Copper ABC transporter, permease protei...    33   5.4  
UniRef50_A5NRY7 Cluster: Cytochrome c oxidase, subunit III; n=3;...    33   5.4  
UniRef50_UPI0000E87ABA Cluster: apolipoprotein N-acyltransferase...    32   7.1  
UniRef50_Q7US88 Cluster: Probable cytochrome c oxidase, subunit ...    32   7.1  
UniRef50_Q96179 Cluster: Cytochrome c oxidase subunit 3; n=1; Pa...    32   7.1  
UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1; Sa...    32   7.1  
UniRef50_UPI00006CD9F4 Cluster: Cytochrome b5-like Heme/Steroid ...    32   9.4  
UniRef50_A6LJ46 Cluster: Putative uncharacterized protein; n=1; ...    32   9.4  
UniRef50_A6LAR8 Cluster: Putative precorrin-2 C20-methyltransfer...    32   9.4  
UniRef50_A4G459 Cluster: Cytochrome oxidase subunit III OXIDASE ...    32   9.4  

>UniRef50_P34842 Cluster: Cytochrome c oxidase subunit 3; n=18;
           cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
           Anopheles gambiae (African malaria mosquito)
          Length = 262

 Score =  254 bits (621), Expect = 1e-66
 Identities = 118/163 (72%), Positives = 134/163 (82%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           + +F AFFH  LSP IE+G   PP  I  FNPFQIPLLNT IL+ SGVTVT AHH+L+E 
Sbjct: 96  ISFFWAFFHSSLSPTIELGMTWPPVGIAAFNPFQIPLLNTAILLASGVTVTWAHHALMEG 155

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLF 371
           N SQ  Q LF TI+LG YFTILQAYEYIEA FTIAD +YGSTF++ATGFHG+HV+IGT F
Sbjct: 156 NHSQATQGLFFTIVLGVYFTILQAYEYIEAPFTIADAVYGSTFYMATGFHGLHVLIGTTF 215

Query: 372 LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           LLIC++RH+N HFSKNHHFGFEAAA Y HFVDVV LFLYI+IY
Sbjct: 216 LLICFLRHINYHFSKNHHFGFEAAAWYWHFVDVVWLFLYITIY 258


>UniRef50_P14574 Cluster: Cytochrome c oxidase subunit 3; n=118;
           Bilateria|Rep: Cytochrome c oxidase subunit 3 - Locusta
           migratoria (Migratory locust)
          Length = 263

 Score =  239 bits (586), Expect = 2e-62
 Identities = 112/161 (69%), Positives = 128/161 (79%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F AFF+  L+P IE+G   PP  I PFNP QIPLLNT IL+ SGVT+T AHHS++E N 
Sbjct: 99  FFWAFFNSSLAPTIELGMKWPPMGIQPFNPIQIPLLNTAILLASGVTITWAHHSIMECNH 158

Query: 198 SQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLL 377
           SQ  Q LF T++LGFYFT+LQ YEY EA FTIAD +YGSTFF+ATGFHG+HVIIGT FLL
Sbjct: 159 SQALQGLFFTVMLGFYFTLLQMYEYWEAPFTIADAVYGSTFFVATGFHGLHVIIGTTFLL 218

Query: 378 ICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
            C IRH+ N FS NHHFGFEAAA Y HFVDVV LFLY+SIY
Sbjct: 219 TCLIRHMMNQFSSNHHFGFEAAAWYWHFVDVVWLFLYLSIY 259


>UniRef50_P00414 Cluster: Cytochrome c oxidase subunit 3; n=659;
           cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
           Homo sapiens (Human)
          Length = 261

 Score =  224 bits (547), Expect = 1e-57
 Identities = 103/161 (63%), Positives = 127/161 (78%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F AF+H  L+P  ++G   PP+ ITP NP ++PLLNT +L+ SGV++T AHHSL+ENN 
Sbjct: 97  FFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNR 156

Query: 198 SQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLL 377
           +Q  Q L +TILLG YFT+LQA EY E+ FTI+D IYGSTFF+ATGFHG+HVIIG+ FL 
Sbjct: 157 NQMIQALLITILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLT 216

Query: 378 ICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           IC+IR L  HF+  HHFGFEAAA Y HFVDVV LFLY+SIY
Sbjct: 217 ICFIRQLMFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIY 257


>UniRef50_Q8W9N0 Cluster: Cytochrome c oxidase subunit 3; n=13;
           cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
           Dugong dugon (Dugong)
          Length = 261

 Score =  222 bits (542), Expect = 5e-57
 Identities = 102/161 (63%), Positives = 126/161 (78%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F AF+H  L+P  E+G   PP+ I P +P ++PLLNT +L+ SGVT+T AHHSL+E N 
Sbjct: 97  FFWAFYHSSLAPTPELGGCWPPTGIHPLDPMEVPLLNTSVLLASGVTITWAHHSLMEGNR 156

Query: 198 SQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLL 377
            Q  Q LF+TI LG YFT+LQA EY EASF+I+D IYGSTFF+ATGFHG+HVIIG+ FL 
Sbjct: 157 KQMLQALFITISLGIYFTLLQASEYHEASFSISDGIYGSTFFMATGFHGLHVIIGSTFLA 216

Query: 378 ICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           +C++R L  HF+ NHHFGFEAAA Y HFVDVV LFLY+SIY
Sbjct: 217 VCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIY 257


>UniRef50_P18945 Cluster: Cytochrome c oxidase subunit 3; n=78;
           Eumetazoa|Rep: Cytochrome c oxidase subunit 3 - Gallus
           gallus (Chicken)
          Length = 261

 Score =  219 bits (535), Expect = 3e-56
 Identities = 102/163 (62%), Positives = 124/163 (76%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           L +F AFFH  L+P  E+G   PP+ + P NP ++PLLNT IL+ SGVTVT AHHS+ E 
Sbjct: 95  LGFFWAFFHSSLAPTPELGGQWPPTGVKPLNPLEVPLLNTAILLASGVTVTWAHHSITEG 154

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLF 371
           N  Q    L LTILLGFYFT LQA EY EASF+IAD +YGSTFF+ATGFHG+HVIIG+ F
Sbjct: 155 NRKQAIHALTLTILLGFYFTALQAMEYHEASFSIADSVYGSTFFVATGFHGLHVIIGSSF 214

Query: 372 LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           L +C +R +  HF+ NHHFGFEAAA Y HFVD++ LFLY+S+Y
Sbjct: 215 LTVCLLRLIKFHFTPNHHFGFEAAAWYWHFVDIIWLFLYMSMY 257


>UniRef50_O99822 Cluster: Cytochrome c oxidase subunit 3; n=24;
           cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
           Rhipicephalus sanguineus (Brown dog tick)
          Length = 257

 Score =  198 bits (484), Expect = 5e-50
 Identities = 92/163 (56%), Positives = 118/163 (72%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           + +F AFFH  LSPNIEIG   PP  I PFNPF+IPLLN+ ILI SG+TVT +HH+++  
Sbjct: 93  VSFFWAFFHSSLSPNIEIGSQWPPKGIYPFNPFEIPLLNSTILISSGITVTWSHHAIMNK 152

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLF 371
           N+      L +TILLG  FT+ Q +EY +A F I+D I+GSTFF+ TGFHG+HV+IG++F
Sbjct: 153 NYISALNSLLITILLGVAFTMFQGFEYFQAQFKISDGIFGSTFFMTTGFHGLHVLIGSIF 212

Query: 372 LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           LL+ Y R  N   S +H FGFEA+A Y HFVDVV LFL+  +Y
Sbjct: 213 LLVSYFRIKNQLISSDHFFGFEASAWYWHFVDVVWLFLFTFMY 255


>UniRef50_Q402M5 Cluster: Cytochrome c oxidase subunit 3; n=6;
           Coelomata|Rep: Cytochrome c oxidase subunit 3 -
           Acrochordus granulatus (Rasp-skinned water snake)
          Length = 261

 Score =  193 bits (471), Expect = 2e-48
 Identities = 86/163 (52%), Positives = 114/163 (69%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           L +F   +H  L P  E+G   PP+ ITP NP ++PLLNT +L+ SG T+T +HH++   
Sbjct: 95  LGFFWTLYHVSLVPTPELGAEWPPTGITPLNPMEVPLLNTAVLLSSGATITWSHHTMTNG 154

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLF 371
           N  +    L +TI+LG YFT LQ  EY +  FTI+D +YGS FF+ATGFHG+HV+IGT F
Sbjct: 155 NKKEATYALMITIMLGIYFTTLQLSEYKDTPFTISDSVYGSLFFVATGFHGLHVMIGTTF 214

Query: 372 LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           L+IC IR +  HF+  HHFG+EAA  Y HFVD+V LFL+IS+Y
Sbjct: 215 LIICLIRLIQFHFTTTHHFGYEAAIWYWHFVDIVWLFLFISVY 257


>UniRef50_P92514 Cluster: Cytochrome c oxidase subunit 3; n=551;
           cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 265

 Score =  192 bits (469), Expect = 3e-48
 Identities = 92/161 (57%), Positives = 112/161 (69%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F AFFH  L+P +EIG I PP  I   +P++IP LNT+IL+ SG  VT AHH+++    
Sbjct: 100 FFWAFFHSSLAPAVEIGGIWPPKGIEVLDPWEIPFLNTLILLSSGAAVTWAHHAILAGKE 159

Query: 198 SQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLL 377
            +    L  T+LL   FT  Q  EY +A FTI+D IYGSTFF+ATGFHG HVIIGTLFL+
Sbjct: 160 KRAVYALVATVLLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI 219

Query: 378 ICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           IC IR    H +K HH GFEAAA Y HFVDVV LFL++SIY
Sbjct: 220 ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIY 260


>UniRef50_P34843 Cluster: Cytochrome c oxidase subunit 3; n=18;
           Protostomia|Rep: Cytochrome c oxidase subunit 3 - Apis
           mellifera ligustica (Common honeybee)
          Length = 259

 Score =  188 bits (459), Expect = 5e-47
 Identities = 92/163 (56%), Positives = 110/163 (67%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           + +F  FFH  +SPNIEI    PP  I  FNP +IPLLN+ IL+ SG TVT +H+ LI N
Sbjct: 94  ISFFWTFFHSSISPNIEINMTWPPKNIKFFNPMEIPLLNSFILVSSGFTVTLSHYYLIIN 153

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLF 371
           N   +K  L LTILLG YFTILQ  EY  + F   D IYGS FF+ATGFHG+HV+IG++F
Sbjct: 154 NLKLSKSYLLLTILLGIYFTILQTIEYSNSFFCFNDSIYGSIFFMATGFHGLHVLIGSIF 213

Query: 372 LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           LLI   R +N HFS  H+  FE A  Y HFVDV+ LFLY  IY
Sbjct: 214 LLISLYRMMNIHFSNMHNMNFELAIWYWHFVDVIWLFLYTFIY 256


>UniRef50_Q37374 Cluster: Cytochrome c oxidase subunit 3; n=5;
           Eukaryota|Rep: Cytochrome c oxidase subunit 3 -
           Acanthamoeba castellanii (Amoeba)
          Length = 329

 Score =  178 bits (433), Expect = 7e-44
 Identities = 90/182 (49%), Positives = 120/182 (65%), Gaps = 21/182 (11%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENN- 194
           +F AFFH  LSP++ +G + PP  I   NP +IPLLNT+IL+ SG+TVT +HH + + + 
Sbjct: 137 FFWAFFHASLSPSVVLGSVWPPLGINVLNPLKIPLLNTLILLLSGLTVTWSHHVIRDKSW 196

Query: 195 ----FSQTKQR----------------LFLTILLGFYFTILQAYEYIEASFTIADRIYGS 314
               FS +                   LFLT+ LG  FT+ Q YEY +ASF I D +YGS
Sbjct: 197 QKFFFSNSNNEEFKAPLLDNYVICAFALFLTVFLGLEFTVWQGYEYYKASFYIYDGVYGS 256

Query: 315 TFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYIS 494
           TF++ TG HG+HVIIGTLFL++C+ R ++ HF  NHHFG+EAA  Y HFVDVV +FL++S
Sbjct: 257 TFYMTTGLHGLHVIIGTLFLIVCFFRLIDLHFIYNHHFGYEAAIWYWHFVDVVWIFLFLS 316

Query: 495 IY 500
           IY
Sbjct: 317 IY 318


>UniRef50_Q4W8D5 Cluster: Cytochrome c oxidase subunit 3; n=14;
           Arthropoda|Rep: Cytochrome c oxidase subunit 3 -
           Leptotrombidium pallidum
          Length = 259

 Score =  176 bits (429), Expect = 2e-43
 Identities = 86/160 (53%), Positives = 111/160 (69%)
 Frame = +3

Query: 21  F*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFS 200
           F AFFH   SPN+EIG I PP ++ PF   +IPLLNTIIL+ SG T+T AHH L++    
Sbjct: 96  FWAFFHSSSSPNVEIGSIWPPQKVVPFPVEEIPLLNTIILLSSGGTLTAAHHFLLKGEKK 155

Query: 201 QTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLI 380
            +   + LTILLG  FT+LQ YEY+EA F+++D  +GS FF+ATGFHG HVI+G++FL  
Sbjct: 156 HSSSLMKLTILLGMLFTLLQGYEYLEAKFSMSDSSFGSAFFLATGFHGAHVIVGSIFLSA 215

Query: 381 CYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           C  +   +  S +    FEA+A Y HFVDVV LFL+ISIY
Sbjct: 216 CLFQIDKSKISFSQFICFEASAWYWHFVDVVWLFLFISIY 255


>UniRef50_Q699N4 Cluster: Cytochrome c oxidase subunit 3; n=4;
           Neoptera|Rep: Cytochrome c oxidase subunit 3 -
           Schizaphis graminum (Aphid)
          Length = 261

 Score =  175 bits (425), Expect = 7e-43
 Identities = 82/163 (50%), Positives = 113/163 (69%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           + +F  F H  L+P+IE+G   PP  I  FNP  IPLLNTIIL+ S  T+T AH  L+ N
Sbjct: 95  ISFFWNFLHNSLAPSIELGLNWPPKNIMFFNPLLIPLLNTIILLTSSFTITLAHLYLLNN 154

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLF 371
           +  +T   + LTI+L  YF +LQ  EY +A+FT +D I+GS+F++ATGFHG+HVIIGT+F
Sbjct: 155 SKKKTIIFMNLTIILSIYFLMLQMLEYKQATFTFSDSIFGSSFYMATGFHGLHVIIGTIF 214

Query: 372 LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           L++  +R +N HFS  HH  FE  A Y HF+D++ LFLY++ Y
Sbjct: 215 LIVNLMRMINLHFSHIHHISFELGAWYWHFIDIIWLFLYMTFY 257


>UniRef50_O99810 Cluster: Cytochrome c oxidase subunit 3; n=6;
           Arthropoda|Rep: Cytochrome c oxidase subunit 3 - Ixodes
           hexagonus (Hedgehog tick)
          Length = 261

 Score =  173 bits (420), Expect = 3e-42
 Identities = 85/163 (52%), Positives = 112/163 (68%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           L +F AFFH  LS  +++    P   + P   F+IPLL T ILI SG++++ +H S+I N
Sbjct: 95  LSFFWAFFHSSLSLMLKLALHDPLKMLLPLILFEIPLLKTTILISSGISISWSHQSIINN 154

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLF 371
           NF +    L +TI+LG  FT LQ +EY ++ F+++D I+GSTFF+ TGFHGIHVIIGT F
Sbjct: 155 NFKEAFNSLLITIMLGVTFTFLQGWEYKQSQFSMSDSIFGSTFFMTTGFHGIHVIIGTSF 214

Query: 372 LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           L+I  IR   N  S +HHFGFEAAA Y HFVDVV LFL+  +Y
Sbjct: 215 LIISLIRINMNLISSSHHFGFEAAAWYWHFVDVVWLFLFTFMY 257


>UniRef50_A7UG17 Cluster: Cytochrome oxidase subunit 3; n=1;
           Phaeosphaeria nodorum SN15|Rep: Cytochrome oxidase
           subunit 3 - Phaeosphaeria nodorum SN15
          Length = 275

 Score =  172 bits (419), Expect = 4e-42
 Identities = 84/163 (51%), Positives = 106/163 (65%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           L  F  FFH  LSP +E+G + PP  I   +PF++PL+NT+IL+ SG TVT  HH LI  
Sbjct: 109 LAIFWTFFHSALSPAVELGAMWPPMGIEAIDPFELPLINTVILLSSGFTVTYGHHFLING 168

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLF 371
           N S+T   L  T++L   FT LQ  EY  +SFTI+D  +GS F+  TGFHG+HV+IGT F
Sbjct: 169 NRSKTLYGLLYTVILATIFTGLQGVEYSVSSFTISDGAFGSCFYFGTGFHGLHVMIGTAF 228

Query: 372 LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           L +   R L  H + NHH G EA   Y HFVDVV LFL++SIY
Sbjct: 229 LAVGLWRVLAYHLTNNHHLGLEAGILYWHFVDVVWLFLFVSIY 271


>UniRef50_Q6SL39 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Armillifer armillatus|Rep: Cytochrome c oxidase subunit
           3 - Armillifer armillatus
          Length = 260

 Score =  169 bits (410), Expect = 5e-41
 Identities = 84/161 (52%), Positives = 107/161 (66%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F   FH  LSPN  +G   PP  I  F+P +IPLLNT+IL+ SG +VT +HHSL+  N+
Sbjct: 96  FFWMLFHTSLSPNTFLGLHWPPLGIKSFSPTEIPLLNTLILLSSGASVTWSHHSLLNKNY 155

Query: 198 SQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLL 377
           SQ    L LTI+LG YFT LQ  EY  A FT+++ I+ S FF+ATGFHG HVI+G+L L 
Sbjct: 156 SQFLLSLSLTIILGTYFTSLQLLEYNLAPFTLSESIFSSMFFLATGFHGFHVILGSLLLT 215

Query: 378 ICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           +   R      +  HHF FEA+A Y HFVD + LFLY+SIY
Sbjct: 216 LSLTRFSLLLMTAEHHFSFEASAWYWHFVDAIWLFLYLSIY 256


>UniRef50_P24891 Cluster: Cytochrome c oxidase subunit 3; n=7;
           Chromadorea|Rep: Cytochrome c oxidase subunit 3 -
           Caenorhabditis elegans
          Length = 255

 Score =  169 bits (410), Expect = 5e-41
 Identities = 85/160 (53%), Positives = 106/160 (66%)
 Frame = +3

Query: 21  F*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFS 200
           F  FF   L P  E+G    P  +   NPF +PLLNTIIL+ SGVTVT AHHSL+ N   
Sbjct: 94  FCTFFDAALVPVHELGETWSPFGMHLVNPFGVPLLNTIILLSSGVTVTWAHHSLLSNK-- 151

Query: 201 QTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLI 380
                + LT LL  YFT +Q  EY+EASF+IAD ++GS F+++TGFHGIHV+ G LFL  
Sbjct: 152 SCTNSMILTCLLAAYFTGIQLMEYMEASFSIADGVFGSIFYLSTGFHGIHVLCGGLFLAF 211

Query: 381 CYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
            ++R L NHF+ NHH G E A  Y HFVDVV LFL++ +Y
Sbjct: 212 NFLRLLKNHFNYNHHLGLEFAILYWHFVDVVWLFLFVFVY 251


>UniRef50_Q2FBN9 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Pediculus humanus corporis|Rep: Cytochrome c oxidase
           subunit 3 - Pediculus humanus corporis (human body
           louse)
          Length = 273

 Score =  166 bits (403), Expect = 3e-40
 Identities = 76/161 (47%), Positives = 108/161 (67%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F A F   LSP++ +G + PP  ++P     +PLLN+I+L+ SGV++T AH+ L+  N 
Sbjct: 109 FFYALFFLSLSPDVSLGLLYPPVGVSPVGVLGVPLLNSILLLSSGVSITWAHNELLSKNI 168

Query: 198 SQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLL 377
           S +   L +T++LG  F + QA EY  +SFT+AD  +GS FF+ TGFHG HV +G +F+ 
Sbjct: 169 SSSLIGLLITLILGLVFLMFQAVEYKTSSFTMADSSFGSVFFLMTGFHGAHVCVGVVFIT 228

Query: 378 ICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           I  IR   NH++ NHH G E AA Y HFVDVV LFLY+++Y
Sbjct: 229 ISTIRLYLNHYNNNHHLGLELAAWYWHFVDVVWLFLYLTLY 269


>UniRef50_Q3T4A3 Cluster: Cytochrome c oxidase subunit 3; n=3;
           Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit 3
           - Smittium culisetae (Gut fungus)
          Length = 260

 Score =  164 bits (398), Expect = 1e-39
 Identities = 80/164 (48%), Positives = 105/164 (64%), Gaps = 1/164 (0%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           L  F A  +  L P IE+G + PP  I   NPF IPLLNT++L+ SG TVT AH+S+I+N
Sbjct: 93  LSVFWAQLNAALVPEIELGGLWPPLGIEAVNPFGIPLLNTLLLLSSGATVTWAHYSMIKN 152

Query: 192 -NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL 368
            N  +T   LFLTIL    FT+LQ +EY  A F+  D +YG TF+  TG H +HV++G  
Sbjct: 153 TNKKETIISLFLTILYATIFTLLQLFEYYYAPFSFVDGVYGCTFYAGTGLHALHVLVGNT 212

Query: 369 FLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           FL++   R + NHF++ HH GFE A  Y HFVD+V L L+I  Y
Sbjct: 213 FLIVALYRIIKNHFTQTHHLGFELAIIYWHFVDIVWLLLFIIFY 256


>UniRef50_P14575 Cluster: Cytochrome c oxidase subunit 3; n=14;
           Ascomycota|Rep: Cytochrome c oxidase subunit 3 -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 269

 Score =  163 bits (395), Expect = 3e-39
 Identities = 79/162 (48%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
 Frame = +3

Query: 21  F*AFFHRRLSPNIEIGRI*PPSRITP--FNPFQIPLLNTIILIRSGVTVT*AHHSLIENN 194
           F AFFH  LSP  E+G + PP  I     +P ++PLLNT+IL+ SG ++T AH+SLI  N
Sbjct: 104 FWAFFHSSLSPTFELGAVWPPVGIADKTIDPLEVPLLNTVILLTSGASLTYAHYSLIARN 163

Query: 195 FSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFL 374
                + L++TI L F F   QAYEY  A FTI+D +YG++F+ ATG HGIH+I+GT+ L
Sbjct: 164 RENALKGLYMTIALSFLFLGGQAYEYWNAPFTISDSVYGASFYFATGLHGIHIIVGTILL 223

Query: 375 LICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           L         H +  HH GFE    Y HF DVV LFLY++IY
Sbjct: 224 LAATYNIYTYHLTNTHHNGFECGIYYWHFCDVVWLFLYLTIY 265


>UniRef50_Q697G9 Cluster: Cytochrome c oxidase subunit 3; n=5;
           Aleyrodidae|Rep: Cytochrome c oxidase subunit 3 -
           Aleurochiton aceris
          Length = 261

 Score =  161 bits (390), Expect = 1e-38
 Identities = 78/163 (47%), Positives = 106/163 (65%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           + +F  +F+  LSP+I +G   PP    P +   IPLLNT+IL+ SG  +T AH+SL+ N
Sbjct: 95  VSFFWMYFYLSLSPDISLGSNWPPLGTQPVSYLNIPLLNTLILLSSGFFITWAHYSLMNN 154

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLF 371
           N+   K    ++IL+G YF I+Q YEY E SF  +D  + S+FFI TGFHG HVI+G LF
Sbjct: 155 NYYMMKFNYTVSILMGVYFFIIQMYEYFEISFDFSDSSFSSSFFILTGFHGFHVIVGILF 214

Query: 372 LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           + I ++R LN+ FS     GFE +  Y HFVDVV LFLY+ +Y
Sbjct: 215 ITINFLRFLNHTFSMISALGFEYSVWYWHFVDVVWLFLYVFLY 257


>UniRef50_Q9B8G8 Cluster: Cytochrome c oxidase subunit 3; n=3;
           Boopidae|Rep: Cytochrome c oxidase subunit 3 -
           Heterodoxus macropus (wallaby louse)
          Length = 263

 Score =  159 bits (385), Expect = 5e-38
 Identities = 73/139 (52%), Positives = 98/139 (70%), Gaps = 2/139 (1%)
 Frame = +3

Query: 90  ITPFNPFQIPLLNTIILIRSGVTVT*AHHSLI--ENNFSQTKQRLFLTILLGFYFTILQA 263
           I   NP  +PLL T+IL+ SGV+VT  H+ L+  E N S  K  L +T++LG  F  LQ 
Sbjct: 121 IMSLNPSTVPLLGTMILLSSGVSVTWCHNELMLSEGNLSSMKNSLLITVILGMVFAALQM 180

Query: 264 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAA 443
           +EY  ++FT++D +YGS F++ TGFHG HVI+GT+FL I ++R  N HFS +HH GF+AA
Sbjct: 181 WEYFMSTFTMSDGVYGSLFYMMTGFHGFHVIVGTIFLFIIFLRLKNYHFSSHHHLGFQAA 240

Query: 444 A*Y*HFVDVV*LFLYISIY 500
           A Y HFVDVV +FLYI +Y
Sbjct: 241 AWYWHFVDVVWIFLYIMLY 259


>UniRef50_Q85MB7 Cluster: Cytochrome c oxidase subunit 3; n=10;
           Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit 3
           - Monoblepharella sp. JEL15
          Length = 292

 Score =  157 bits (380), Expect = 2e-37
 Identities = 72/163 (44%), Positives = 106/163 (65%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           + +F A+FH  LSP+I +G + PP  I   +P+ IPLL +IIL+ SG T T AH++LI  
Sbjct: 95  ISFFWAYFHSSLSPDIVLGGVWPPIGIVSVDPWSIPLLGSIILLSSGATCTVAHNALING 154

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLF 371
           N       +F T++LGF F  LQA EY  + F+IAD I+G+ F++ TG HG HVIIG +F
Sbjct: 155 NKDLAVATMFATVVLGFLFVGLQATEYYVSEFSIADSIFGTVFYMTTGLHGTHVIIGAIF 214

Query: 372 LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           L +  +R + + F+ +HH G E +  Y H VDV+ LF++++ Y
Sbjct: 215 LTVMLVRMVRDQFTTHHHLGLEFSLWYWHMVDVIWLFVFLTYY 257


>UniRef50_Q6ED55 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Candida stellata|Rep: Cytochrome c oxidase subunit 3 -
           Candida stellata (Yeast)
          Length = 271

 Score =  156 bits (379), Expect = 3e-37
 Identities = 77/160 (48%), Positives = 100/160 (62%)
 Frame = +3

Query: 21  F*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFS 200
           F A+F+  L+P++EIG I PP  I P     +PL NT+IL+ SG T+T +HH+LI  N  
Sbjct: 108 FWAYFYSALTPSVEIGEIWPPISIIPIQATDLPLFNTLILLISGATITYSHHALIARNRF 167

Query: 201 QTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLI 380
            +   LFLTILLGF F I Q +EY   S+T+AD +YGS FF+ TG HGIHVI GTL L +
Sbjct: 168 NSIFGLFLTILLGFLFIICQYFEYYYCSYTLADSVYGSVFFMLTGLHGIHVITGTLLLCL 227

Query: 381 CYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
            + R  N   +   H GF  +    HF+DV  LF+YI  Y
Sbjct: 228 NFYRLYNYQLTSEKHTGFNTSILLWHFLDVAWLFVYIVCY 267


>UniRef50_Q674Q1 Cluster: Cytochrome c oxidase subunit 3; n=3;
           Aleyrodinae|Rep: Cytochrome c oxidase subunit 3 -
           Bemisia tabaci (Sweetpotato whitefly)
          Length = 262

 Score =  156 bits (378), Expect = 3e-37
 Identities = 74/163 (45%), Positives = 108/163 (66%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           + +F  +F+  LSP++  G I PP  I   +   IPLLNT+IL+ SG  +T AH+ L  N
Sbjct: 96  ISFFWMYFYYSLSPDMTTGSIWPPYLIIQMSFMDIPLLNTLILLMSGFLITWAHYDLTMN 155

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLF 371
           NF  +K  L ++ILLG YF ++Q YEY+ ++F+  D ++G++FFI TGFHG+HV+IG +F
Sbjct: 156 NFKNSKTSLLMSILLGTYFLMIQGYEYLNSNFSFNDSVFGNSFFILTGFHGLHVMIGLIF 215

Query: 372 LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           L+    +     FS  + +GFE +  Y HFVD+V LFLY+SIY
Sbjct: 216 LITMLNQLSMKTFSLVNLYGFEYSIWYWHFVDIVWLFLYLSIY 258


>UniRef50_Q9B6D8 Cluster: Cytochrome c oxidase subunit 3; n=3;
           Ascomycota|Rep: Cytochrome c oxidase subunit 3 -
           Yarrowia lipolytica (Candida lipolytica)
          Length = 268

 Score =  156 bits (378), Expect = 3e-37
 Identities = 77/160 (48%), Positives = 99/160 (61%)
 Frame = +3

Query: 21  F*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFS 200
           F AFFH  ++P IE+G + PP  I    P ++PLLNTI+L+ SG T+T +HH+L+  N  
Sbjct: 105 FWAFFHSAMAPTIELGGVWPPVGIEAIGPSELPLLNTILLLCSGATLTWSHHALLGGNRF 164

Query: 201 QTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLI 380
            T   L LTI L   F I Q  EY  A FTI+D I+GS F+  TGFHG+H+IIG + L +
Sbjct: 165 NTLLGLILTIALAVTFMICQYMEYSNAPFTISDGIFGSVFYFGTGFHGLHIIIGIIMLGV 224

Query: 381 CYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
              R      + NHH G+E +  Y HFVDVV LFLYI  Y
Sbjct: 225 SLWRIYTYQLTNNHHVGYETSILYYHFVDVVWLFLYIVFY 264


>UniRef50_Q2GD92 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Neorickettsia sennetsu str. Miyayama|Rep: Cytochrome c
           oxidase, subunit III - Neorickettsia sennetsu (strain
           Miyayama)
          Length = 274

 Score =  152 bits (369), Expect = 4e-36
 Identities = 70/145 (48%), Positives = 98/145 (67%), Gaps = 4/145 (2%)
 Frame = +3

Query: 78  PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 257
           PP  I   NP+ +PLLNT++L+ SG ++T AHHS+++ +     + L  T++LG  FT L
Sbjct: 124 PPEGIVAVNPWNLPLLNTMVLLLSGASMTWAHHSVLKGDNDGVVKGLLYTVVLGLIFTCL 183

Query: 258 QAYEYIEASFTIADR----IYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHH 425
           Q YEY  ++F +A+     IY S F+IATGFHG+HVIIGT+FL +CY R  +  F+  +H
Sbjct: 184 QGYEYYHSAFALAEEGYKAIYSSNFYIATGFHGLHVIIGTIFLAVCYFRARDGQFTAQNH 243

Query: 426 FGFEAAA*Y*HFVDVV*LFLYISIY 500
            G E AA Y HFVDVV LFL++ +Y
Sbjct: 244 LGLEFAAWYWHFVDVVWLFLFVFLY 268


>UniRef50_Q5LNY0 Cluster: Cytochrome c oxidase, subunit III; n=14;
           Alphaproteobacteria|Rep: Cytochrome c oxidase, subunit
           III - Silicibacter pomeroyi
          Length = 271

 Score =  149 bits (360), Expect = 5e-35
 Identities = 79/167 (47%), Positives = 105/167 (62%), Gaps = 6/167 (3%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIE-IGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENN 194
           +F +FF  R+ P  E +G       I   +PF +PL+NT++L+ SG  VT AHH+L+ NN
Sbjct: 97  WFWSFFKHRMYPMQEYVGTEYVAPSIHAVDPFHLPLINTLVLLLSGCAVTWAHHALVHNN 156

Query: 195 FSQTK-QRLFLTILLGFYFTILQAYEYIEA----SFTIADRIYGSTFFIATGFHGIHVII 359
             +   Q L + I LG  FT+LQAYEY E      +T     + S FF+ATGFHG+HVII
Sbjct: 157 DRKALIQGLSIGIFLGMIFTLLQAYEYAELLLHEDWTFGGDQFYSNFFMATGFHGMHVII 216

Query: 360 GTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           GT+FL +C +R L   F+   H GFEAAA Y HFVDVV LFL+ ++Y
Sbjct: 217 GTIFLAVCLLRALKGDFTPEKHIGFEAAAWYWHFVDVVWLFLFFAVY 263


>UniRef50_Q0H2E5 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Primeuchroeus sp. M48|Rep: Cytochrome c oxidase subunit
           3 - Primeuchroeus sp. M48
          Length = 227

 Score =  146 bits (354), Expect = 3e-34
 Identities = 67/112 (59%), Positives = 83/112 (74%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           + +F AF H  LSP +EIG I PP  ITPFNPF +PLLNTIIL+ SG+T+T  HHS++ N
Sbjct: 94  VSFFWAFSHNSLSPAVEIGGIWPPKGITPFNPFHVPLLNTIILLSSGLTITWCHHSIMNN 153

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGI 347
             ++    + +TI LG  F+ILQ YEYIEA FTIAD IYGSTFF+ TGFHG+
Sbjct: 154 MKNEAINSMKMTITLGILFSILQGYEYIEAPFTIADSIYGSTFFLTTGFHGL 205


>UniRef50_Q9I724 Cluster: Cytochrome c oxidase, subunit III; n=130;
           Proteobacteria|Rep: Cytochrome c oxidase, subunit III -
           Pseudomonas aeruginosa
          Length = 295

 Score =  145 bits (352), Expect = 5e-34
 Identities = 76/145 (52%), Positives = 94/145 (64%), Gaps = 4/145 (2%)
 Frame = +3

Query: 78  PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 257
           PPS +    P+++PL+NTI+L+ S  TVT AHH+L +N     K  L LT+LLG  F IL
Sbjct: 151 PPSAV--IEPWKLPLINTILLVTSSFTVTFAHHALKKNKRGPLKAWLALTVLLGIAFLIL 208

Query: 258 QAYEYIEA----SFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHH 425
           QA EY+ A      T+   IYGSTFF+ TGFHG HV +G L L I  IR L  HF   HH
Sbjct: 209 QAEEYVHAYNELGLTLGAGIYGSTFFMLTGFHGAHVTLGALILGIMLIRILRGHFDAEHH 268

Query: 426 FGFEAAA*Y*HFVDVV*LFLYISIY 500
           FGFEAA+ Y HFVDVV + L+I +Y
Sbjct: 269 FGFEAASWYWHFVDVVWIGLFIFVY 293


>UniRef50_Q766W8 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Vargula hilgendorfii|Rep: Cytochrome c oxidase subunit 3
           - Vargula hilgendorfii (Sea firefly) (Cypridina
           hilgendorfii)
          Length = 259

 Score =  144 bits (349), Expect = 1e-33
 Identities = 75/161 (46%), Positives = 95/161 (59%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F AFF   L P  EIG   PP  I   +P   PLL T++L+ SG  +T +HH++     
Sbjct: 95  FFWAFFTSALVPTPEIGLTWPPQGIHIPSPSGAPLLGTLLLLSSGAFLTWSHHAMTTGQD 154

Query: 198 SQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLL 377
           +   Q L   ++LG  F +LQA EY  A F+IAD   GS FF+ TG HG HV+IG   L 
Sbjct: 155 TDVTQGLIWCLILGEGFAVLQASEYACAQFSIADSALGSCFFMLTGLHGSHVLIGLSLLE 214

Query: 378 ICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           IC +RHL   F+ NHH GFE +A Y HFVDVV LF+   IY
Sbjct: 215 ICLVRHLKGQFATNHHLGFETSAWYWHFVDVVWLFVITFIY 255


>UniRef50_Q5P2E8 Cluster: Cytochrome c oxidase, subunit III; n=2;
           Azoarcus|Rep: Cytochrome c oxidase, subunit III -
           Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
           (strain EbN1))
          Length = 283

 Score =  142 bits (345), Expect = 3e-33
 Identities = 73/140 (52%), Positives = 91/140 (65%), Gaps = 4/140 (2%)
 Frame = +3

Query: 93  TPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY 272
           TP   + IP LNT+IL+ SGVT+T AH+ L+++N SQ K  L LTILLG  F   Q YEY
Sbjct: 142 TPMGAWGIPALNTLILLSSGVTLTWAHYGLLKDNRSQLKIGLLLTILLGVTFLGFQIYEY 201

Query: 273 IEA----SFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEA 440
           + A    +  +   IYGSTFF+ TGFHG+HV IG + L +   R L  HFS  HHF FEA
Sbjct: 202 VHAYRELNLQLDTGIYGSTFFMLTGFHGLHVTIGAIMLTVALGRVLAGHFSPEHHFAFEA 261

Query: 441 AA*Y*HFVDVV*LFLYISIY 500
            A Y HFVDVV L L++ +Y
Sbjct: 262 TAWYWHFVDVVWLMLFVVVY 281


>UniRef50_Q2I6Z0 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Lottia digitalis|Rep: Cytochrome c oxidase subunit 3 -
           Lottia digitalis (California fingered limpet)
          Length = 280

 Score =  141 bits (341), Expect = 1e-32
 Identities = 69/161 (42%), Positives = 96/161 (59%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F AF H  LSP+ E+G   PP  I P N + +P LN+ +LI SG T+T A  ++ E + 
Sbjct: 99  FFWAFLHFALSPSFEVGMTWPPQGIVPPNAWGLPFLNSTLLINSGFTLTWASRAVKEGSK 158

Query: 198 SQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLL 377
                 + +TI LG  F  +Q  E+ +A F I D +YGS F++ TG HG+HV+ G +FL 
Sbjct: 159 WSAAAGMVMTIALGVIFMAVQMKEWWDAPFDIRDSVYGSCFYMMTGLHGLHVLGGLIFLF 218

Query: 378 ICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           +C IR L NHFS   H G   A  Y HFVDVV + L++ +Y
Sbjct: 219 VCLIRLLRNHFSTARHLGLLCAIWYWHFVDVVWVLLWVMVY 259


>UniRef50_P00420 Cluster: Cytochrome c oxidase subunit 3; n=18;
           Ascomycota|Rep: Cytochrome c oxidase subunit 3 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 269

 Score =  139 bits (337), Expect = 3e-32
 Identities = 67/160 (41%), Positives = 94/160 (58%)
 Frame = +3

Query: 21  F*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFS 200
           F A+FH  +SP++ +G   PP  I    P ++PLLNTIIL+ SG TVT +HH+LI  N +
Sbjct: 106 FWAYFHSAMSPDVTLGACWPPVGIEAVQPTELPLLNTIILLSSGATVTYSHHALIAGNRN 165

Query: 201 QTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLI 380
           +    L +T  L   F   Q  EY  A+FTI+D +YGS F+  TG H +H+++    L +
Sbjct: 166 KALSGLLITFWLIVIFVTCQYIEYTNAAFTISDGVYGSVFYAGTGLHFLHMVMLAAMLGV 225

Query: 381 CYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
            Y R  N H +  HH G+E    Y H +DV+ LFLY+  Y
Sbjct: 226 NYWRMRNYHLTAGHHVGYETTIIYTHVLDVIWLFLYVVFY 265


>UniRef50_Q0QJ94 Cluster: Cytochrome c oxidase subunit 3; n=1; Xenos
           vesparum|Rep: Cytochrome c oxidase subunit 3 - Xenos
           vesparum
          Length = 251

 Score =  138 bits (335), Expect = 6e-32
 Identities = 65/141 (46%), Positives = 91/141 (64%)
 Frame = +3

Query: 78  PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 257
           PP  +   NP+ IPLLNT+IL  S +T+T +HH LI  N+   K   F+T++LG  F  L
Sbjct: 112 PPKFLLMINPYHIPLLNTLILFSSSITITWSHHCLINKNYKIMKISSFITLMLGITFITL 171

Query: 258 QAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFE 437
           Q YE+    F + D IYGS+F++ TGFHG HVIIG +F+    I+    + +  H+F FE
Sbjct: 172 QIYEFFTMKFNMNDSIYGSSFYLTTGFHGFHVIIGLMFISSYMIK--MKYSNSWHNFNFE 229

Query: 438 AAA*Y*HFVDVV*LFLYISIY 500
           +A+ Y HFVD+V LF+Y S+Y
Sbjct: 230 SASWYWHFVDLVWLFVYTSLY 250


>UniRef50_Q6TY89 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Xiphinema americanum|Rep: Cytochrome c oxidase subunit 3
           - Xiphinema americanum
          Length = 249

 Score =  138 bits (334), Expect = 7e-32
 Identities = 70/160 (43%), Positives = 96/160 (60%)
 Frame = +3

Query: 21  F*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFS 200
           F +FFH  +SP        P   +    PFQ+PLLNTI+L+ SGVT T +HH ++    S
Sbjct: 88  FWSFFHASVSPITTGNNTWPFVGLDIIPPFQVPLLNTIVLLMSGVTATLSHHEVLAGEKS 147

Query: 201 QTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLI 380
                LF ++LLG YF +LQ  EY  + F+I+  ++GS FF+ TGFHG HV +G + L I
Sbjct: 148 MW---LFYSLLLGIYFLMLQGMEYYSSLFSISSSVFGSLFFLGTGFHGFHVCLGAVMLFI 204

Query: 381 CYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
            ++R   N  S +HHF  E +  Y HFVDVV LFL+  +Y
Sbjct: 205 SFLRVNMNKLSLSHHFFLEFSLWYWHFVDVVWLFLFFWVY 244


>UniRef50_A3VNW6 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Parvularcula bermudensis HTCC2503|Rep: Cytochrome c
           oxidase, subunit III - Parvularcula bermudensis HTCC2503
          Length = 319

 Score =  137 bits (332), Expect = 1e-31
 Identities = 73/151 (48%), Positives = 92/151 (60%), Gaps = 6/151 (3%)
 Frame = +3

Query: 78  PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 257
           P   + P +P+ +P +NT+IL+ SG TVT AHH++   +    K  L +T+ LG  F+  
Sbjct: 165 PGPGVEPLSPWGLPFVNTVILLLSGTTVTWAHHAIQVGDKEGFKWGLIVTVALGVIFSFF 224

Query: 258 QAYEYIEA------SFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKN 419
           Q  EY E       SF     IYGS+FF+ATGFHG HV+IGT+FL IC  R L    +  
Sbjct: 225 QGVEYYEVLSQDMFSFN-GGSIYGSSFFMATGFHGAHVVIGTIFLAICLARGLAGQLTPE 283

Query: 420 HHFGFEAAA*Y*HFVDVV*LFLYISIY**GN 512
            HFGFEAAA Y HFVDVV LFL+  IY  GN
Sbjct: 284 RHFGFEAAAWYWHFVDVVWLFLFAMIYILGN 314


>UniRef50_P41775 Cluster: Cytochrome c oxidase subunit 3; n=132;
           Mytilus|Rep: Cytochrome c oxidase subunit 3 - Mytilus
           edulis (Blue mussel)
          Length = 265

 Score =  135 bits (327), Expect = 5e-31
 Identities = 70/162 (43%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F  FFH  LSP+ E+G   PP  I   NP    L  T +LI SG+ VT AH S+   ++
Sbjct: 98  FFWTFFHNALSPSCELGMRWPPPGIRTPNPSSTSLFETGLLISSGLFVTQAHKSMRLKDY 157

Query: 198 SQTKQ-RLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFL 374
                  L +TI+ G  F ++Q  EY   S+TIAD +YGS F++ TGFHG+HV++GT++L
Sbjct: 158 DVGPFIGLVVTIVCGTVFFLVQLREYYWNSYTIADSVYGSVFYLLTGFHGMHVVVGTIWL 217

Query: 375 LICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           ++  +R     FS   HFGFEA   Y HFVDVV + L+  +Y
Sbjct: 218 MVSLVRLWRGEFSSQRHFGFEACIWYWHFVDVVWVALWCLVY 259


>UniRef50_Q9T6M2 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Globodera pallida|Rep: Cytochrome c oxidase subunit 3 -
           Globodera pallida
          Length = 257

 Score =  135 bits (326), Expect = 7e-31
 Identities = 64/161 (39%), Positives = 100/161 (62%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F  FF   L  ++++G    P  +   NPF +PLLN+++L+ S + +T +H+  + N F
Sbjct: 95  FFWFFFDSVLVTSLDLGFWGVPLGVXKINPFGLPLLNSLLLLSSALILTNSHYFFLANGF 154

Query: 198 SQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLL 377
           S     L  ++ LG  F  +Q +EY  +SF+++D  YGS FF+ATGFHG HV+ G  FL+
Sbjct: 155 SSLT--LLFSVFLGGVFLGVQGFEYQNSSFSLSDSSYGSIFFLATGFHGFHVLFGLCFLI 212

Query: 378 ICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           +  +R+    F+ +HH GFE A  Y HFVDV+ LFL++ +Y
Sbjct: 213 VSGVRNFIKSFNFSHHLGFEFAILYWHFVDVIWLFLFVFVY 253


>UniRef50_Q1AGW8 Cluster: Cytochrome c oxidase subunit 3; n=3;
           Metazoa|Rep: Cytochrome c oxidase subunit 3 - Trichoplax
           adhaerens
          Length = 305

 Score =  133 bits (322), Expect = 2e-30
 Identities = 58/95 (61%), Positives = 75/95 (78%)
 Frame = +3

Query: 216 LFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRH 395
           L +T+LLG  FT LQA+EY EASF I+D +YGSTFF+ TG HG+HV++GT FL++C+IR 
Sbjct: 207 LLMTVLLGIIFTGLQAFEYKEASFAISDSVYGSTFFMLTGTHGLHVLVGTTFLIVCFIRL 266

Query: 396 LNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           L+N F+ +HH G EAA  Y HFVDVV LFLY+ +Y
Sbjct: 267 LSNQFTNSHHLGLEAAIWYWHFVDVVWLFLYVFVY 301



 Score = 70.9 bits (166), Expect = 2e-11
 Identities = 31/58 (53%), Positives = 42/58 (72%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLI 185
           L +F AFFH  L+P++E+G + PP  I   +PF +PLLNT IL+ SG TVT AHH++I
Sbjct: 95  LAFFWAFFHSSLAPSVELGSVWPPLGIEALDPFAVPLLNTTILLSSGATVTWAHHAII 152


>UniRef50_Q12E42 Cluster: Cytochrome c oxidase, subunit III; n=11;
           Betaproteobacteria|Rep: Cytochrome c oxidase, subunit
           III - Polaromonas sp. (strain JS666 / ATCC BAA-500)
          Length = 293

 Score =  133 bits (321), Expect = 3e-30
 Identities = 66/140 (47%), Positives = 87/140 (62%), Gaps = 4/140 (2%)
 Frame = +3

Query: 93  TPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY 272
           T   PF +P +NT +L+ SGVT+T AHH+L +N+   T   ++ T+LLG  F  +Q YEY
Sbjct: 152 TTMTPFWLPTINTALLLSSGVTLTIAHHALRDNHRGLTIAFMWATVLLGIIFLGVQGYEY 211

Query: 273 IEA----SFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEA 440
             A    +  +   +YGSTF++ TGFHG HV +G L LL   +R    HF+   HFGFE 
Sbjct: 212 AHAYSELNLKLTSGVYGSTFYMLTGFHGFHVFVGMLMLLFITLRLQKGHFTPEKHFGFEG 271

Query: 441 AA*Y*HFVDVV*LFLYISIY 500
           AA Y HFVDVV L LYI +Y
Sbjct: 272 AAWYWHFVDVVWLGLYILVY 291


>UniRef50_Q2GLU5 Cluster: Cytochrome c oxidase, subunit III; n=11;
           Rickettsiales|Rep: Cytochrome c oxidase, subunit III -
           Anaplasma phagocytophilum (strain HZ)
          Length = 285

 Score =  130 bits (315), Expect = 1e-29
 Identities = 60/151 (39%), Positives = 94/151 (62%), Gaps = 4/151 (2%)
 Frame = +3

Query: 60  EIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLG 239
           ++  + PP  I   + + +P +NT+ L+ SG T+T +HH L+ ++   + + L  TI LG
Sbjct: 131 KVATVWPPVGIETVSAWSLPFMNTVTLLLSGCTITWSHHYLMIDDIKSSLKMLAFTIGLG 190

Query: 240 FYFTILQAYEYIEASFTIADR----IYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNH 407
             F+  Q  EY+ A F  ++     +Y S F++ATGFHG+HV++G +FL++C+IR     
Sbjct: 191 LVFSTFQLIEYLHAGFAFSEEGLKAVYSSNFYMATGFHGLHVLMGIVFLIVCWIRMFRGQ 250

Query: 408 FSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
            S + H GFE AA Y HFVDVV LFL++ +Y
Sbjct: 251 MSSDCHIGFECAAWYWHFVDVVWLFLFLFMY 281


>UniRef50_Q06SA4 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Acanthocardia tuberculata|Rep: Cytochrome c oxidase
           subunit 3 - Acanthocardia tuberculata (tuberculate
           cockle)
          Length = 278

 Score =  130 bits (315), Expect = 1e-29
 Identities = 73/170 (42%), Positives = 100/170 (58%), Gaps = 7/170 (4%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           L +F AF H          R  PP  I   +P++IP +NT IL+ SG+TVT AH +   N
Sbjct: 103 LSFFWAFAHACWGTTSMNLRF-PPLGIKCLSPWKIPAVNTAILVGSGLTVTYAHRAAKSN 161

Query: 192 NFSQTKQR------LFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHV 353
            +  TK        LF+T++LGF F  LQ YEY   ++++ D I+GS F+I TGFHG+HV
Sbjct: 162 KYKWTKTNPELTLGLFVTVVLGFVFLGLQMYEYWWLTYSMNDGIFGSCFYIMTGFHGLHV 221

Query: 354 IIGTLFLLICYIRHLNNHFS-KNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           ++GTL+L +C +R    HF  +  H G + A  Y HFVDVV L LY  +Y
Sbjct: 222 VVGTLWLAVCLLRASLGHFQFRYRHVGLQLAIWYWHFVDVVWLLLYGFVY 271


>UniRef50_Q8HEI3 Cluster: Cytochrome c oxidase subunit 3; n=2;
           Varroa destructor|Rep: Cytochrome c oxidase subunit 3 -
           Varroa destructor (honeybee mite)
          Length = 263

 Score =  129 bits (312), Expect = 3e-29
 Identities = 65/142 (45%), Positives = 90/142 (63%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           +  F A+FH  LSP+IEIG + PP  I  FNP++IPLLNT++L+ SG T+T +H+S++ N
Sbjct: 93  ISLFWAYFHSMLSPSIEIGMMWPPKGIIFFNPYEIPLLNTMVLLMSGFTITWSHYSILNN 152

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLF 371
                   L LT+ LG YF++LQ  EY +A FTI D I GS F++ TGFHG+HVI     
Sbjct: 153 KKLMALVSLLLTVSLGIYFSLLQYMEYKQALFTINDGICGSVFYMLTGFHGLHVIYWNYL 212

Query: 372 LLICYIRHLNNHFSKNHHFGFE 437
             I  I  +NN+   +H   F+
Sbjct: 213 FKIKSI--INNNKLNSHKKSFK 232


>UniRef50_Q06SB4 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Hiatella arctica|Rep: Cytochrome c oxidase subunit 3 -
           Hiatella arctica
          Length = 275

 Score =  129 bits (312), Expect = 3e-29
 Identities = 73/162 (45%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F AFF  ++  N E G   PP  I   +   IPLLNT++L+ SGVTVT    +    N 
Sbjct: 106 FFGAFFFFKIGTNSE-GMPWPPEGIFVVDYAGIPLLNTVLLVSSGVTVTVGLKAAKHYNR 164

Query: 198 SQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLL 377
             T   L  +I LG  F+ LQ  EY E  FT+ D +YGS FF+ TGFHG+HV IGT+FL 
Sbjct: 165 ISTLWGLKYSIFLGVIFSCLQLEEYKECYFTMMDGVYGSLFFMMTGFHGLHVCIGTIFLT 224

Query: 378 ICYIRHLNNHFSKN-HHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           I   R    HF K  ++FG EAA  Y HFVD++ + LY+ +Y
Sbjct: 225 IMLFRCYFGHFEKPFNYFGLEAAVWYWHFVDIIWILLYLLVY 266


>UniRef50_Q1YUZ2 Cluster: Cytochrome c oxidase subunit III; n=1;
           gamma proteobacterium HTCC2207|Rep: Cytochrome c oxidase
           subunit III - gamma proteobacterium HTCC2207
          Length = 313

 Score =  127 bits (307), Expect = 1e-28
 Identities = 67/133 (50%), Positives = 81/133 (60%), Gaps = 4/133 (3%)
 Frame = +3

Query: 114 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEA---- 281
           +PL NT+IL+ S VTV  AH  L  NN  Q    L  T+LLG  F +LQA EYI A    
Sbjct: 178 LPLWNTVILVTSSVTVHIAHTGLKNNNRKQFVGWLGFTVLLGLIFLVLQAEEYIHAYQHM 237

Query: 282 SFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HF 461
             T+   IYG+TFF+ TGFHG HV +GT  L I + R L  HFS    FGFEAA+ Y HF
Sbjct: 238 GLTLDSGIYGTTFFMLTGFHGAHVTLGTAMLAIAWFRSLKGHFSNEDQFGFEAASWYWHF 297

Query: 462 VDVV*LFLYISIY 500
           VDVV + L+  +Y
Sbjct: 298 VDVVWILLFFVVY 310


>UniRef50_Q2HJM2 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Gliricola porcelli|Rep: Cytochrome c oxidase subunit 3 -
           Gliricola porcelli
          Length = 234

 Score =  126 bits (305), Expect = 2e-28
 Identities = 67/147 (45%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
 Frame = +3

Query: 3   INKLKYF*AFFHRRL----SPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*A 170
           I++L +F +FF   +     P+I IG + P   I+P     +PLL T+IL+ SGVTVT  
Sbjct: 90  ISELMFFFSFFWGAIYVGSHPSIFIGALWPSWGISPIENMNVPLLGTLILLSSGVTVTIC 149

Query: 171 HHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIH 350
           H  ++EN +    + LF+TI+LG  F+ILQ  EYIE SF   D +YGS FF+ATGFHG H
Sbjct: 150 HKQMLENVYEP--KFLFITIILGVMFSILQMMEYIENSFCFNDSVYGSFFFLATGFHGFH 207

Query: 351 VIIGTLFLLICYIRHLNNHFSKNHHFG 431
           VI+GT+ L     R    HFS +H  G
Sbjct: 208 VILGTIMLSSMLFRKTKGHFSNSHMTG 234


>UniRef50_Q4KRY0 Cluster: Cytochrome c oxidase subunit 3; n=2;
           Crassostrea|Rep: Cytochrome c oxidase subunit 3 -
           Crassostrea virginica (Eastern oyster)
          Length = 290

 Score =  125 bits (302), Expect = 6e-28
 Identities = 70/162 (43%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F AFFH  LSP+IEIG   PP+ +   +    PL NT +L+ S  +++ AHH  ++  +
Sbjct: 125 FFWAFFHMALSPSIEIGGCWPPAGLHCLDWSGTPLHNTALLVMSSGSISSAHHFFMDGEW 184

Query: 198 S-QTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFL 374
                   +LT+ L + F   Q  EY+   FTIAD +YGS FF+ TG HG+HVI GT  L
Sbjct: 185 EFGLGVSYYLTLYLSYLFIENQYMEYMWLPFTIADGVYGSCFFMLTGLHGLHVIAGTCGL 244

Query: 375 LICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           L C  R L   FS  HH     A  Y HFVDVV L L+  IY
Sbjct: 245 LFCGARILLMQFSDTHHVALTLAIWYWHFVDVVWLALFFIIY 286


>UniRef50_Q9MD26 Cluster: Cytochrome oxidase subunit 3; n=1;
           Scenedesmus obliquus|Rep: Cytochrome oxidase subunit 3 -
           Scenedesmus obliquus
          Length = 311

 Score =  124 bits (298), Expect = 2e-27
 Identities = 67/158 (42%), Positives = 89/158 (56%)
 Frame = +3

Query: 27  AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQT 206
           AF H  L P I++G   PP  I P +   +P  NTI+L+RS  T   A H++  NN S  
Sbjct: 118 AFLHAALMPTIQVGMSWPPVGIVPVHWTALPRTNTILLLRSYFTANAAKHAMDHNNKSLC 177

Query: 207 KQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICY 386
           K  L  TI LG  F   Q  EY  A+FT +D ++GS F++ TGFHG+HVI+G L+L +CY
Sbjct: 178 KLHLRTTIGLGLLFVYCQYLEYTGAAFTFSDTVFGSAFYLTTGFHGLHVILGFLYLTVCY 237

Query: 387 IRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           I    N  +       + A  Y HFVDVV + L + IY
Sbjct: 238 I--TLNSAAPGRCTAMDLAILYWHFVDVVWVGLLVIIY 273


>UniRef50_Q2LMM5 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Hanseniaspora uvarum|Rep: Cytochrome c oxidase subunit 3
           - Hanseniaspora uvarum (Yeast)
          Length = 262

 Score =  124 bits (298), Expect = 2e-27
 Identities = 61/160 (38%), Positives = 87/160 (54%)
 Frame = +3

Query: 21  F*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFS 200
           F A+ H  ++P IE+G    P  I      ++PLLNTI+L+ SG TVT +HH  I  ++ 
Sbjct: 100 FWAYLHSAMNPTIELGLQWAPLDIVKVEAMELPLLNTILLLSSGATVTLSHHKWINGDYK 159

Query: 201 QTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLI 380
            +   +F+T LL   F + Q  EYI A FTI D ++GSTF+  TG HG H+I   L L  
Sbjct: 160 NSTIAMFITTLLVVVFVVFQVVEYITAQFTITDGVFGSTFYAGTGLHGFHMITLILMLST 219

Query: 381 CYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
             +R     FS+ H    +    Y H +DV+ L L++  Y
Sbjct: 220 VTVRMYFRTFSRTHSTNLDTTIIYSHVLDVIWLALFVVFY 259


>UniRef50_Q5W901 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Lingula anatina|Rep: Cytochrome c oxidase subunit 3 -
           Lingula unguis
          Length = 275

 Score =  119 bits (286), Expect = 5e-26
 Identities = 64/165 (38%), Positives = 97/165 (58%), Gaps = 1/165 (0%)
 Frame = +3

Query: 21  F*AFFHRRLSPNIEIGRI*PPS-RITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           F AFFH  L P+ E+G + PP   I P +P+ +PLL   IL+ SG +   A  + ++  F
Sbjct: 113 FWAFFHSALVPSDELGCMWPPIVGIMPMDPYALPLLGVTILVSSGYSANWAVKT-VKAGF 171

Query: 198 SQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLL 377
           +  +  + +T+ LG  F+ LQ +EY  A FT+ D IYGS F++ TGFHG+HV+ GT+F +
Sbjct: 172 NDWRS-MGVTVGLGILFSCLQLHEYKSAGFTMQDGIYGSCFYLITGFHGLHVLAGTMFNI 230

Query: 378 ICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY**GN 512
            C    +   +S +H    + +  Y HFVD+V +  Y+ IY  GN
Sbjct: 231 YCLKMMVYGSYSPSHMTSIQMSVWYWHFVDIVWVAAYLFIYIWGN 275


>UniRef50_A2TN48 Cluster: Cytochrome c oxidase subunit 3; n=6;
           Mermithidae|Rep: Cytochrome c oxidase subunit 3 -
           Hexamermis agrotis
          Length = 257

 Score =  119 bits (286), Expect = 5e-26
 Identities = 64/163 (39%), Positives = 92/163 (56%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           + +F  +FH     + E+G   P   IT  N   +PLLN+++L+ SGV++T   H+L+  
Sbjct: 93  ISFFWCYFHFMFMQSGELGFQWPSKGITAVNYLSVPLLNSLLLLSSGVSLT-ISHNLMSL 151

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLF 371
           +       L LTILLG  F+  Q +EY+   F  +D  YGS FF+ TGFHG+HVIIG+  
Sbjct: 152 DLKSFNLYLGLTILLGLLFSYCQYWEYLMLDFLWSDSSYGSIFFMGTGFHGLHVIIGSTI 211

Query: 372 LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           L +  IR + NH   +    FE  A Y HFVDV+ + L+   Y
Sbjct: 212 LSVILIRDMMNHLLMDSMI-FELGAWYWHFVDVIWIILFTEFY 253


>UniRef50_Q21PS6 Cluster: Cytochrome c oxidase, subunit III; n=3;
           Gammaproteobacteria|Rep: Cytochrome c oxidase, subunit
           III - Saccharophagus degradans (strain 2-40 / ATCC 43961
           / DSM 17024)
          Length = 304

 Score =  118 bits (285), Expect = 6e-26
 Identities = 69/156 (44%), Positives = 94/156 (60%), Gaps = 9/156 (5%)
 Frame = +3

Query: 60  EIGRI*PPSRITPFNPFQ-----IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 224
           E+G++  P     F  F      +PL NTIIL+ S VTV  AH  L ++N  Q    L +
Sbjct: 147 ELGKVSGPGENMAFPGFGAMFGWLPLWNTIILLSSSVTVHFAHTGLKKDNKKQFNWWLGI 206

Query: 225 TILLGFYFTILQAYEYIEA---SFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRH 395
           T+LLG  F  LQ  EY  A   + T+   +YG+TFF+ TGFHG+HV +GT  LL+ ++R 
Sbjct: 207 TVLLGIIFLCLQVAEYSHAYHVNLTLDAGVYGNTFFMLTGFHGLHVTMGTFMLLVQWLRS 266

Query: 396 L-NNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           +   HFS N  FGFEA++ Y HFVDVV + L+I +Y
Sbjct: 267 VTKGHFSHNDCFGFEASSWYWHFVDVVWVGLFIFVY 302


>UniRef50_A0Z309 Cluster: Cytochrome c oxidase, subunit III; n=3;
           unclassified Gammaproteobacteria|Rep: Cytochrome c
           oxidase, subunit III - marine gamma proteobacterium
           HTCC2080
          Length = 326

 Score =  118 bits (284), Expect = 8e-26
 Identities = 63/134 (47%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
 Frame = +3

Query: 114 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEA---- 281
           +P+ NTIIL+ S  TV  AH +L+++  S+    L +T+ LG  F  LQA EY EA    
Sbjct: 191 LPMWNTIILLSSSFTVHVAHTALLKDQRSKFNLWLGITVALGIIFVGLQAAEYYEAYVLF 250

Query: 282 SFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHL-NNHFSKNHHFGFEAAA*Y*H 458
             T+   IYGSTFF+ TGFHG HV +G   LLI  +R +  +HF+ + HFGFEA++ Y H
Sbjct: 251 GLTLNSGIYGSTFFMLTGFHGFHVFMGMTMLLIQLLRSVRGHHFTASDHFGFEASSWYWH 310

Query: 459 FVDVV*LFLYISIY 500
           FVDVV +FL++ +Y
Sbjct: 311 FVDVVWVFLFLFVY 324


>UniRef50_Q950M9 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Rhizophydium sp. 136|Rep: Cytochrome c oxidase subunit 3
           - Rhizophydium sp. 136
          Length = 275

 Score =  116 bits (278), Expect = 4e-25
 Identities = 60/161 (37%), Positives = 86/161 (53%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F    H  L+P IEI    PP  +   N   +PLLN+++L+  G   T AHHS    N 
Sbjct: 112 FFWCLGHSALNPTIEIVTW-PPLGVNSINYLSLPLLNSVLLLSGGWIATWAHHSFFLGNK 170

Query: 198 SQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLL 377
           + T   L + ++L   F  +Q  EY  + FTIAD +YGS+FFI TG HGIHV+   +FL 
Sbjct: 171 TNTLIGLIIAVILTIIFVYVQYLEYSYSEFTIADSVYGSSFFILTGTHGIHVMAAVIFLC 230

Query: 378 ICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           +   R   +  +  H    + A  Y H VDVV L +++ +Y
Sbjct: 231 VATYRIFTDSVTSEHALNLDFALIYYHLVDVVWLVVFLVVY 271


>UniRef50_Q5K5G0 Cluster: Cytochrome c oxidase subunit 3; n=9;
           Embryophyta|Rep: Cytochrome c oxidase subunit 3 - Tulipa
           sp. CQ-2001
          Length = 239

 Score =  114 bits (275), Expect = 1e-24
 Identities = 68/161 (42%), Positives = 93/161 (57%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F A  H  L+P +EIG I PP  I   +P++IP LNT IL  SG  VT AHH+++    
Sbjct: 101 FFWASSHSSLAPTVEIGGIWPPKGIGVLDPWEIPFLNTPILPSSGAAVTWAHHAILAG-- 158

Query: 198 SQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLL 377
            + K+ ++  +                A+ ++A         ++TGFHG HV+IGTLFL+
Sbjct: 159 -KEKRAVYALV----------------ATLSLA--------LVSTGFHGFHVLIGTLFLI 193

Query: 378 ICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           IC +R    H +K HH GFEAAA Y HFVDVV LF ++SIY
Sbjct: 194 ICGLRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFPFVSIY 234


>UniRef50_Q7YF37 Cluster: Cytochrome c oxidase subunit 3; n=4;
           Venerupis (Ruditapes) philippinarum|Rep: Cytochrome c
           oxidase subunit 3 - Venerupis (Ruditapes) philippinarum
          Length = 301

 Score =  105 bits (253), Expect = 5e-22
 Identities = 58/153 (37%), Positives = 90/153 (58%), Gaps = 12/153 (7%)
 Frame = +3

Query: 78  PPSRITPFNPFQIPLLNTIILIRSGVT------VT*AHHSLIENNFSQTKQ-----RLFL 224
           PP  +    P+++P LN ++L+ SG+           H   ++   S   +      + +
Sbjct: 134 PPVGVKAIYPWRVPFLNLLLLVSSGMFSQASKWAVSCHSKELDTKKSGHYKFAALLSMMV 193

Query: 225 TILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNN 404
           +ILLG  F  +Q+ EY   S+TIAD ++GS+F++ TGFHG+HV++G  FLL+C+ R L +
Sbjct: 194 SILLGLLFLWVQSEEYYWCSYTIADGVFGSSFYMLTGFHGMHVMVGLGFLLVCWFRLLWS 253

Query: 405 HFSKNHHF-GFEAAA*Y*HFVDVV*LFLYISIY 500
           HFS    F G + A  Y HFVDVV +FL+I +Y
Sbjct: 254 HFSFRRSFLGLQNAIYYWHFVDVVWIFLFIFVY 286


>UniRef50_Q7NIM1 Cluster: Cytochrome c oxidase subunit III; n=1;
           Gloeobacter violaceus|Rep: Cytochrome c oxidase subunit
           III - Gloeobacter violaceus
          Length = 208

 Score =  101 bits (243), Expect = 8e-21
 Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 1/142 (0%)
 Frame = +3

Query: 78  PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 257
           PP+  TP     +P + T+IL+ S   +  A  +L   +  Q +    LT  +G  F   
Sbjct: 66  PPAG-TPELEKILPAIFTVILVASSGVIMLAERALKHGDMGQFRLFWLLTTAMGTVFVAG 124

Query: 258 QAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHL-NNHFSKNHHFGF 434
           QAYE++   F + D ++G TF++ TGFHG+HVIIG L   + + R    NH++   HFG 
Sbjct: 125 QAYEWMHLEFGLKDGLFGGTFYVLTGFHGMHVIIGLLLQAVVFFRSFKTNHYTPASHFGV 184

Query: 435 EAAA*Y*HFVDVV*LFLYISIY 500
            A++ Y HFVDVV +FL+  +Y
Sbjct: 185 GASSLYWHFVDVVWIFLFALLY 206


>UniRef50_A3KCM4 Cluster: Cytochrome c oxidase subunit 3; n=15;
           Pectinidae|Rep: Cytochrome c oxidase subunit 3 -
           Patinopecten yessoensis (Ezo giant scallop) (Yesso
           scallop)
          Length = 290

 Score =  101 bits (243), Expect = 8e-21
 Identities = 57/163 (34%), Positives = 85/163 (52%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           + +F AFFH  LS +  +G   PP  ++  +   IPL NT +L+ +      A  ++   
Sbjct: 93  VSFFWAFFHSALSASHVVGCYWPPEMLS-MHCKGIPLANTGLLVGTIYPCNVAQKAIKSA 151

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLF 371
                   L + +++G  F  LQ +EY  A FT+AD IYGS FF  TG HG+HV+ G +F
Sbjct: 152 QLRPLLLWLGVVMVMGACFVGLQVWEYYTAKFTMADGIYGSCFFALTGLHGLHVVGGLIF 211

Query: 372 LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           L + + R    HFS   H     A  Y HFVD + + +Y+ +Y
Sbjct: 212 LFVAWNRARLGHFSPQRHLNLTFAVWYWHFVDGIWIAVYVFVY 254


>UniRef50_Q9XKD9 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Dicyema misakiense|Rep: Cytochrome c oxidase subunit 3 -
           Dicyema misakiense
          Length = 255

 Score = 97.9 bits (233), Expect = 1e-19
 Identities = 61/158 (38%), Positives = 85/158 (53%)
 Frame = +3

Query: 27  AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQT 206
           +F    L P++  G   P   ++ F+PF +PLL T +LI S V VT +H S   ++   T
Sbjct: 101 SFSWSMLIPSVWTGFEWPLVGMSFFDPFSLPLLGTSLLISSAVFVTWSHGS---SSLKGT 157

Query: 207 KQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICY 386
              L  +ILLG  F  +Q  EY+ +SFTI+   +GS FF+ATG HG+HVIIG  FL    
Sbjct: 158 MISLLFSILLGSSFVCIQFIEYLSSSFTISSSSFGSCFFVATGLHGLHVIIGLFFLAFSL 217

Query: 387 IRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
            R      S+ H+   +    Y HFVD V L ++   Y
Sbjct: 218 FR-----LSRFHNAILDGPIWYWHFVDYVWLLVFTMGY 250


>UniRef50_Q9B8A6 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Trichinella spiralis|Rep: Cytochrome c oxidase subunit 3
           - Trichinella spiralis (Trichina worm)
          Length = 257

 Score = 97.5 bits (232), Expect = 2e-19
 Identities = 51/141 (36%), Positives = 77/141 (54%)
 Frame = +3

Query: 78  PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 257
           PP+ +   +P  +P LNTI+LI S  TVT +H      N  +    L LT++L   F  +
Sbjct: 114 PPTSLNMPSPLGVPSLNTILLITSSATVTMSHFQTSLPN-GKPLNWLLLTLMLSIMFITM 172

Query: 258 QAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFE 437
           Q  EY  ++FT++  + GS FF+ TG HG+HV++G++ L  C +      +S      +E
Sbjct: 173 QYVEYHTSTFTMSSGVNGSIFFMTTGLHGLHVLLGSMALTTCLLLMNQYKYSNTSLNSYE 232

Query: 438 AAA*Y*HFVDVV*LFLYISIY 500
            +  Y HFVD V L LY + Y
Sbjct: 233 MSIWYWHFVDAVWLMLYTTFY 253


>UniRef50_Q3AWK7 Cluster: Possible cytochrome c oxidase subunit III;
           n=23; Cyanobacteria|Rep: Possible cytochrome c oxidase
           subunit III - Synechococcus sp. (strain CC9902)
          Length = 209

 Score = 95.1 bits (226), Expect = 9e-19
 Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
 Frame = +3

Query: 114 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFTI 293
           +P+LNT++L+ S  T   A  ++  ++ ++ ++ L +T  LG  F I Q  EY    F +
Sbjct: 77  LPILNTVLLLVSSATFHKAGQAIRNSDHARCRRWLLITASLGIAFLISQMVEYFTLPFGL 136

Query: 294 ADRIYGSTFFIATGFHGIHVIIGTLFLLICY--IRHLNNHFSKNHHFGFEAAA*Y*HFVD 467
            D +Y STFF  TGFHG+HV +G +  LI +   R      +  +HF  EAA  Y HFVD
Sbjct: 137 TDNLYASTFFAVTGFHGLHVTLGAVMTLIVWWQARESGGRVTAENHFPLEAAELYWHFVD 196

Query: 468 VV*LFLYISIY 500
            + + L++ +Y
Sbjct: 197 GIWVVLFVILY 207


>UniRef50_Q5V2C4 Cluster: Cytochrome c oxidase polypeptide III; n=6;
           Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide
           III - Haloarcula marismortui (Halobacterium marismortui)
          Length = 287

 Score = 93.9 bits (223), Expect = 2e-18
 Identities = 52/131 (39%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIE----ASF 287
           ++NT++LI S VT+  +H +L   N S+  + L  T+LLG  F   Q YEY E      F
Sbjct: 151 IVNTLLLIASSVTLHYSHIALRSGNRSRFLKLLGATLLLGIVFIGGQVYEYYEFIVHKGF 210

Query: 288 TIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVD 467
           +I   IYGS F+  TG HG+HV +G + L I +IR     +S   H     A+ Y HFVD
Sbjct: 211 SIGGGIYGSAFYGLTGLHGLHVTMGAVLLGIVFIRGYYGQYSAERHTSVSTASMYWHFVD 270

Query: 468 VV*LFLYISIY 500
           +V +FL + +Y
Sbjct: 271 IVWIFLVVVLY 281


>UniRef50_A4UCW1 Cluster: Cytochrome c oxidase subunit 3; n=12;
           Macoma|Rep: Cytochrome c oxidase subunit 3 - Macoma
           balthica
          Length = 198

 Score = 93.5 bits (222), Expect = 3e-18
 Identities = 52/119 (43%), Positives = 68/119 (57%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F A+F   +  N+  G + PP  I P  P+  PL NT IL+ SG  VT AH ++  ++ 
Sbjct: 75  FFWAWFSSGIG-NLSSGCLWPPRPIIPVYPWGAPLFNTAILLTSGAAVTWAHRAVAIHDR 133

Query: 198 SQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFL 374
            +    L L +L G  F   Q  EY  ASFTIAD  YGS F++ TG HG HV+ GTLFL
Sbjct: 134 EEAMIPLGLCVLAGVVFLRFQFGEYSTASFTIADSAYGSCFYMLTGLHGSHVLGGTLFL 192


>UniRef50_Q1HBC1 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Strelkovimermis spiculatus|Rep: Cytochrome c oxidase
           subunit 3 - Strelkovimermis spiculatus
          Length = 257

 Score = 92.7 bits (220), Expect = 5e-18
 Identities = 56/163 (34%), Positives = 88/163 (53%)
 Frame = +3

Query: 12  LKYF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN 191
           + +F ++ H  L    E+G + PP  I   +   + LLN+++L+ S   +T +H  L+  
Sbjct: 94  ITFFWSYTHFMLLVMGEVGLMWPPMGINKVDFMTLALLNSVLLLSSAYFLTISHLMLVTL 153

Query: 192 NFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLF 371
           N   +K  + +TI LG  F   Q  EY+   F  +D +YGS F++ T FH  HV++G LF
Sbjct: 154 NKMLSKFFMIITIFLGMVFLGYQMMEYMMLEFLWSDSVYGSIFYMTTSFHAFHVMVG-LF 212

Query: 372 LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           +L   +  +    +K +   FE +A Y HFVDV+ L LYI  Y
Sbjct: 213 MLSSVLTLM----TKMNMMIFEFSAWYWHFVDVIWLMLYIFYY 251


>UniRef50_Q06475 Cluster: Cytochrome c oxidase subunit 3 (EC
           1.9.3.1) (Cytochrome c oxidase polypeptide III)
           (Cytochrome aa3 subunit 3) (Oxidase aa(3) subunit 3);
           n=12; Cyanobacteria|Rep: Cytochrome c oxidase subunit 3
           (EC 1.9.3.1) (Cytochrome c oxidase polypeptide III)
           (Cytochrome aa3 subunit 3) (Oxidase aa(3) subunit 3) -
           Synechocystis sp. (strain PCC 6803)
          Length = 233

 Score = 92.7 bits (220), Expect = 5e-18
 Identities = 52/142 (36%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
 Frame = +3

Query: 81  PSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLF-LTILLGFYFTIL 257
           P   TP     +P +N+IILI S   +     + I NN +   Q+ F +T  +G  F   
Sbjct: 91  PPEGTPELELLLPGVNSIILISSSFVMH-KGQAAIRNNDNAGLQKWFGITAAMGIIFLAG 149

Query: 258 QAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLL-ICYIRHLNNHFSKNHHFGF 434
           Q YEY      +   ++ S F++ TGFHG+HV  G L +L + +      H+S+  HFG 
Sbjct: 150 QMYEYFHLEMGLTTNLFASCFYVLTGFHGLHVTFGLLLILSVLWRSRQPGHYSRTSHFGV 209

Query: 435 EAAA*Y*HFVDVV*LFLYISIY 500
           EAA  Y HFVDVV + L+I +Y
Sbjct: 210 EAAELYWHFVDVVWIVLFILVY 231


>UniRef50_Q0I8U0 Cluster: Cytochrome c oxidase subunit III; n=10;
           Cyanobacteria|Rep: Cytochrome c oxidase subunit III -
           Synechococcus sp. (strain CC9311)
          Length = 217

 Score = 90.2 bits (214), Expect = 3e-17
 Identities = 44/130 (33%), Positives = 72/130 (55%)
 Frame = +3

Query: 111 QIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFT 290
           ++PL+NT+IL+ S      A   L + N    +    LT+ +G YF   Q  E+ E  F+
Sbjct: 82  RMPLINTVILVSSSFVAYFAERYLHQKNLWGFRALWLLTMAMGTYFVYGQYVEWSELQFS 141

Query: 291 IADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDV 470
           ++  ++G TFF+ TGFHG+HVI G L + +  +R    +  +    G  + + + HFVDV
Sbjct: 142 LSSGVFGGTFFLLTGFHGLHVITGILLMGLMLLRSFRPNNYEKGDMGVTSVSLFWHFVDV 201

Query: 471 V*LFLYISIY 500
           + + LY+ IY
Sbjct: 202 IWIILYLLIY 211


>UniRef50_Q8YTI3 Cluster: Cytochrome c oxidase subunit III; n=11;
           Cyanobacteria|Rep: Cytochrome c oxidase subunit III -
           Anabaena sp. (strain PCC 7120)
          Length = 200

 Score = 88.6 bits (210), Expect = 8e-17
 Identities = 45/128 (35%), Positives = 66/128 (51%)
 Frame = +3

Query: 117 PLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIA 296
           P +NT++L+ S   +  A  +L   N    +  L  T+ +G YF + QA E+    F   
Sbjct: 70  PAINTVVLVASSFVIYFAELALKRQNLRLFRIFLSATMAMGSYFLVGQAIEWSHLEFGFT 129

Query: 297 DRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV* 476
             +YG  F++ TGFHG+HV  G L   I  +R L        HFG  A + + HFVDV+ 
Sbjct: 130 SGVYGGMFYLLTGFHGLHVFTGILLQFIILVRSLIPGNYDTGHFGVNATSLFWHFVDVIW 189

Query: 477 LFLYISIY 500
           + L+I IY
Sbjct: 190 IILFILIY 197


>UniRef50_O21049 Cluster: Cytochrome oxidase subunit 3; n=9;
           Eukaryota|Rep: Cytochrome oxidase subunit 3 -
           Dictyostelium discoideum (Slime mold)
          Length = 435

 Score = 88.2 bits (209), Expect = 1e-16
 Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
 Frame = +3

Query: 207 KQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICY 386
           K RL+ T+L    F   Q YEY  A F++ D IYGS FF+ TGFHG HV++G++ + I  
Sbjct: 322 KTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFFLLTGFHGFHVLVGSILIGIIT 381

Query: 387 IRHLNNHFS-----------KNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           IR +  +F+           KN   GF     Y HFVD+V +FLYI IY
Sbjct: 382 IRFIVGNFNLLNVGTNFQIYKNKSTGFACTLFYWHFVDIVWIFLYIVIY 430



 Score = 50.4 bits (115), Expect = 3e-05
 Identities = 25/71 (35%), Positives = 40/71 (56%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
           +F ++F+  LSPNI IG + PP  +T ++   +PLLNT++L+ SG  +T  +  L E   
Sbjct: 150 FFWSYFYISLSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKA 209

Query: 198 SQTKQRLFLTI 230
              K    L +
Sbjct: 210 VHEKNEKVLAV 220


>UniRef50_Q64LI8 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Microstomum lineare|Rep: Cytochrome c oxidase subunit 3
           - Microstomum lineare
          Length = 245

 Score = 87.0 bits (206), Expect = 2e-16
 Identities = 46/128 (35%), Positives = 70/128 (54%)
 Frame = +3

Query: 105 PFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEAS 284
           P  +PLLNT +L+ SGV+VT  H  L + N   +   L  T+ LG +F + Q  EY  + 
Sbjct: 115 PAGLPLLNTFLLLSSGVSVTLYHSFLFQGNGGLSY--LIYTLFLGVFFELCQINEYSNSV 172

Query: 285 FTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFV 464
            +++   YG+TFF+ TG HG HV +G + L +     L ++ +       E    Y HFV
Sbjct: 173 LSLSSFTYGTTFFMLTGLHGFHVFVGIVCLSVLLYFTLFHYINSLSLISSECLIWYWHFV 232

Query: 465 DVV*LFLY 488
           D+V +F+Y
Sbjct: 233 DIVWIFVY 240


>UniRef50_Q6NGA0 Cluster: Cytochrome c oxidase subunit 3; n=46;
           Actinomycetales|Rep: Cytochrome c oxidase subunit 3 -
           Corynebacterium diphtheriae
          Length = 205

 Score = 85.8 bits (203), Expect = 5e-16
 Identities = 51/130 (39%), Positives = 70/130 (53%), Gaps = 3/130 (2%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFT 290
           L+ TIILI S VT      +    +    ++   LTILLG  F + QAYEY   +E   T
Sbjct: 73  LVITIILISSSVTAQFGVFAAERGDVFGVRRWFSLTILLGAIFLVGQAYEYFHLVEHGMT 132

Query: 291 IADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDV 470
           I   +YGS+FFI TGFH  HV+ G L  ++  +R   + F+          + Y HFVDV
Sbjct: 133 IQSSVYGSSFFITTGFHAAHVLAGALAFVVVLLRLSKSKFTPAQATAAMVVSYYWHFVDV 192

Query: 471 V*LFLYISIY 500
           V + L+I+IY
Sbjct: 193 VWIGLFITIY 202


>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
            1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
            thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
            (EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
            thermophilus (strain HB8 / ATCC 27634 / DSM 579)
          Length = 791

 Score = 85.4 bits (202), Expect = 7e-16
 Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
 Frame = +3

Query: 114  IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFTI 293
            + LLNT +L+ S  TV  AHH L    F+  +  L +TI+LG  F ++Q++E+ +     
Sbjct: 659  LALLNTFLLVSSSFTVHFAHHDLRRGRFNPFRFGLLVTIILGVLFFLVQSWEFYQFYHHS 718

Query: 294  A--DRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVD 467
            +  + ++ + FF   G HG+HV+IG   L++ Y++ L    + ++H   EAA+ Y H VD
Sbjct: 719  SWQENLWTAAFFTIVGLHGLHVVIGGFGLILAYLQALRGKITLHNHGTLEAASMYWHLVD 778

Query: 468  VV*LFLYISIY 500
             V L +    Y
Sbjct: 779  AVWLVIVTIFY 789


>UniRef50_Q36635 Cluster: Cytochrome c oxidase subunit 3; n=3;
           Embryophyta|Rep: Cytochrome c oxidase subunit 3 - Pellia
           epiphylla
          Length = 84

 Score = 82.2 bits (194), Expect = 7e-15
 Identities = 40/83 (48%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
 Frame = +3

Query: 171 HHSLIENN--FSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHG 344
           HH+++       Q       T+ L   FT  Q  EY+EA FTI+D IYGST F ATGFHG
Sbjct: 1   HHAILAGGCFLKQAVYASIATVFLALVFTGFQGIEYVEAPFTISDGIYGSTSFSATGFHG 60

Query: 345 IHVIIGTLFLLICYIRHLNNHFS 413
            HVIIGT+  +IC IR    HF+
Sbjct: 61  FHVIIGTISSIICGIRQYLGHFT 83


>UniRef50_Q9FV97 Cluster: Cytochrome c oxidase subunit III; n=2;
           Chlamydomonadaceae|Rep: Cytochrome c oxidase subunit III
           - Chlamydomonas reinhardtii
          Length = 382

 Score = 81.4 bits (192), Expect = 1e-14
 Identities = 52/158 (32%), Positives = 81/158 (51%)
 Frame = +3

Query: 27  AFFHRRLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQT 206
           A  H  +SP++ +    PP  I P    +  L+ + +L  S  +   A+ +++  +    
Sbjct: 227 ACLHLGMSPSVALQMQWPPVGIEPIGWDKRALVMSAVLAASYYS---ANVAMVAKDPKVV 283

Query: 207 KQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICY 386
              L  TI LG  F   Q  EY E  FTI D  YG+TFF+ TGFHG+HV++G+L+L    
Sbjct: 284 MGALATTIGLGAMFLADQYLEYNETPFTITDSPYGTTFFVTTGFHGMHVLLGSLYLTAAL 343

Query: 387 IRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           + +   H   N     +++  Y HFVD+V + +Y  IY
Sbjct: 344 MMYKRTH---NAGAALKSSILYWHFVDIVWIAVYGIIY 378


>UniRef50_Q5DNB4 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Leptorhynchoides thecatus|Rep: Cytochrome c oxidase
           subunit 3 - Leptorhynchoides thecatus
          Length = 243

 Score = 80.6 bits (190), Expect = 2e-14
 Identities = 45/132 (34%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
 Frame = +3

Query: 111 QIPLLNTIILIRSGVTVT*AHHSLIENNFSQTK-QRLFLTILLGFYFTILQAYEYIEASF 287
           +IPL  ++IL+ SGV++T  H+    +         L LT+ LG+ F ++Q  E++ ++ 
Sbjct: 109 EIPLFISVILLSSGVSITIFHNMYCGSYCGVWLIGGLVLTLFLGYLFLLVQKGEWLNSNL 168

Query: 288 TIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKN-HHFGFEAAA*Y*HFV 464
           +  D ++GS F++ TGFHG+HV++G LFLL   + ++  +F      +  E A  Y HFV
Sbjct: 169 SWGDGVFGSFFYMITGFHGLHVLMG-LFLLSFLLYYVITNFGVYFSDWKVECAVWYWHFV 227

Query: 465 DVV*LFLYISIY 500
           D+V L +++ +Y
Sbjct: 228 DLVWLLVFLVVY 239


>UniRef50_P50677 Cluster: Cytochrome c oxidase subunit 3 (EC
           1.9.3.1) (Cytochrome c oxidase polypeptide III)
           (Cytochrome aa3 subunit 3) (Oxidase aa(3) subunit 3);
           n=10; Cyanobacteria|Rep: Cytochrome c oxidase subunit 3
           (EC 1.9.3.1) (Cytochrome c oxidase polypeptide III)
           (Cytochrome aa3 subunit 3) (Oxidase aa(3) subunit 3) -
           Synechococcus vulcanus (Thermosynechococcus vulcanus)
          Length = 201

 Score = 80.6 bits (190), Expect = 2e-14
 Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
 Frame = +3

Query: 114 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFTI 293
           +P +NT+ILI S   +     ++ +++    ++  ++T  +G  F   Q YEY+   + +
Sbjct: 67  VPTINTLILISSSFVIHYGDVAIKKDDVRGMRKWYWITAAMGAVFLGGQVYEYLTLGYGL 126

Query: 294 ADRIYGSTFFIATGFHGIHVIIGTLFLL-ICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDV 470
              ++ + F++ TGFHG+HV IG L +L + +      H++   H G   A  Y HFVDV
Sbjct: 127 RTNVFANCFYVMTGFHGLHVFIGILLILGVIWRSRRPGHYNAQKHTGVAMAEIYWHFVDV 186

Query: 471 V*LFLYISIY 500
           + + L+  +Y
Sbjct: 187 IWIILFTLLY 196


>UniRef50_P73908 Cluster: Cytochrome c oxidase subunit III; n=2;
           Chroococcales|Rep: Cytochrome c oxidase subunit III -
           Synechocystis sp. (strain PCC 6803)
          Length = 198

 Score = 79.4 bits (187), Expect = 5e-14
 Identities = 45/126 (35%), Positives = 61/126 (48%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADR 302
           +NT++L+ S   +  A  +L        +     TI LG  F   QA E+    F +   
Sbjct: 68  INTMVLVTSSGAIILAEKALHRGEMKLFRLLWLATISLGIVFLFGQAAEWAGMPFGLDAG 127

Query: 303 IYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LF 482
             G TFF+ TGFHG+HV  G   LL  Y R L  H     H G  A A + HFVDV+ + 
Sbjct: 128 SAGGTFFLLTGFHGLHVFTGVCLLLYMYWRSLQPHNFDRGHEGVTAIALFWHFVDVIWII 187

Query: 483 LYISIY 500
           L+I +Y
Sbjct: 188 LFILLY 193


>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
            Deinococcus|Rep: Cytochrome c oxidase, subunit I -
            Deinococcus radiodurans
          Length = 820

 Score = 72.9 bits (171), Expect = 4e-12
 Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
 Frame = +3

Query: 123  LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY--IEASFTIA 296
            LNT+IL+ S   V  A   L     S  +  LF+T+LLG  F I Q YE+          
Sbjct: 691  LNTLILVTSSGVVHKAEQDLHHGRTSWGRLGLFITLLLGAIFMIFQVYEFSLFGTESDWR 750

Query: 297  DRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV* 476
              ++ S FFI  G HG+H++IG   + + Y + L     K +H     A+ Y H VDVV 
Sbjct: 751  QNLWQSCFFIIVGLHGLHILIGGTGIALPYYQLLTGKMDKYNHGSIVPASLYWHLVDVVW 810

Query: 477  LFLYISIY 500
            L +    Y
Sbjct: 811  LLIVAIFY 818


>UniRef50_Q01PD0 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Solibacter usitatus Ellin6076|Rep: Cytochrome c oxidase,
           subunit III - Solibacter usitatus (strain Ellin6076)
          Length = 198

 Score = 72.5 bits (170), Expect = 5e-12
 Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 4/140 (2%)
 Frame = +3

Query: 93  TPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLG---FYFTILQA 263
           TP    +IP+  T+ L+ S +T+  A   +   N        F+T+ LG    Y T  + 
Sbjct: 55  TPNEVLRIPVFYTLCLLSSSLTIHFAIRGVRHGNIGTFSSWWFVTVALGTAFLYGTAREW 114

Query: 264 YEYI-EASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEA 440
           Y  I E   TI   ++G+T++   G HG HV+IG + L   +I     H  + H +  + 
Sbjct: 115 YRLIFEDGLTIRTNLFGTTYYSLVGLHGFHVVIGLILLSTVWIFTALGHVGQEHAYRLDV 174

Query: 441 AA*Y*HFVDVV*LFLYISIY 500
            + Y HFVD V + ++  +Y
Sbjct: 175 LSLYWHFVDAVWVVVFTVVY 194


>UniRef50_Q1YMX1 Cluster: Putative cytochrome c oxidase subunit III;
           n=1; Aurantimonas sp. SI85-9A1|Rep: Putative cytochrome
           c oxidase subunit III - Aurantimonas sp. SI85-9A1
          Length = 235

 Score = 71.7 bits (168), Expect = 9e-12
 Identities = 41/131 (31%), Positives = 63/131 (48%)
 Frame = +3

Query: 108 FQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASF 287
           F +   +T ILI S + V  A       +  +    L + +LLG  F  LQ  E++   F
Sbjct: 99  FTLSAPSTAILIASSIAVWFAEKGAETGSRGRLVAGLLVGLLLGTIFVGLQLKEWLNKPF 158

Query: 288 TIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVD 467
           T++   YGS +F  TGFH  HV++G + L +  +     +F +         A Y HFVD
Sbjct: 159 TLSAHSYGSMYFTVTGFHLAHVVVGLVILAVLTVWSTLGYFDRQRMAPVAIGALYWHFVD 218

Query: 468 VV*LFLYISIY 500
            V L ++ S+Y
Sbjct: 219 AVWLAVFFSLY 229


>UniRef50_Q0SHM9 Cluster: Cytochrome c oxidase; n=7; Actinobacteria
           (class)|Rep: Cytochrome c oxidase - Rhodococcus sp.
           (strain RHA1)
          Length = 246

 Score = 71.7 bits (168), Expect = 9e-12
 Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
 Frame = +3

Query: 81  PSRITPFNPF-QIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 257
           P   T  N F  +P+  T++LI S  T      +    +    ++   LT+ +G +F + 
Sbjct: 102 PPEPTELNLFLAVPV--TLVLIASSFTCQMGVFAAERGDVFGLRRWYLLTLAMGTFFVLG 159

Query: 258 QAYEYI---EASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHF 428
           QAYEYI   E   +I+  +YGS F++ TGFHG+HVI G +  +    R   + F+     
Sbjct: 160 QAYEYIHLVEHGTSISSSVYGSVFYMTTGFHGMHVIGGLIAFVFLIARTKVSKFTPAQAT 219

Query: 429 GFEAAA*Y*HFVDVV*LFLYISIY 500
                + Y HFVD+V + L+ +IY
Sbjct: 220 AAIVVSYYWHFVDIVWIGLFATIY 243


>UniRef50_Q0LFY5 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Herpetosiphon aurantiacus ATCC 23779|Rep: Cytochrome c
           oxidase, subunit III - Herpetosiphon aurantiacus ATCC
           23779
          Length = 208

 Score = 71.3 bits (167), Expect = 1e-11
 Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
 Frame = +3

Query: 135 ILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFTIADRI 305
           IL+ S +T+  A   +  NN  + +  L  TI  G  F   Q YE+   +    TI + +
Sbjct: 80  ILLTSSLTMVLALDGVKTNNQKRFRFWLGATIACGLVFLGGQVYEFYHIVHEGVTIKNMM 139

Query: 306 YGSTFFIATGFHGIHVIIGTLF---LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV* 476
           +GSTFF  TGFHG HV +G ++   LL+  IRH    ++  ++   E    Y HFVD+V 
Sbjct: 140 FGSTFFFVTGFHGTHVAVGVVWLTSLLVSAIRH-PERYNAGNYMAVELGGLYWHFVDLVW 198

Query: 477 LFLYISIY 500
           + ++  IY
Sbjct: 199 VLIFTVIY 206


>UniRef50_Q67ML0 Cluster: Cytochrome C oxidase subunit III; n=3;
           Bacteria|Rep: Cytochrome C oxidase subunit III -
           Symbiobacterium thermophilum
          Length = 210

 Score = 70.5 bits (165), Expect = 2e-11
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
 Frame = +3

Query: 99  FNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIE 278
           FN  ++  ++T +L+ S + +  A ++   N     ++ + +T L+G  F   QAYE+  
Sbjct: 69  FN-IELTTVSTFVLLMSSLAMVLAVNAAQRNEGRAARRWVLVTALMGLTFLGFQAYEFTH 127

Query: 279 ---ASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA* 449
              A  +++  ++G+ F+  TGFHG HV +G ++LL           + +     E A  
Sbjct: 128 FYHAGLSLSSSVFGTAFYTLTGFHGAHVAVGVIWLLTLLYHGRGKGLTVDKADDVEVAGL 187

Query: 450 Y*HFVDVV*LFLYISIY 500
           Y HFVD+V + L+  +Y
Sbjct: 188 YWHFVDIVWIVLFTVVY 204


>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|Rep:
            Cytochrome caa3 oxidase - Planctomyces maris DSM 8797
          Length = 754

 Score = 69.3 bits (162), Expect = 5e-11
 Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
 Frame = +3

Query: 129  TIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFTIAD 299
            ++ LI S +T   A   L     S     L LTILLG  F   Q +EY   + +  +I  
Sbjct: 623  SLFLIASSITFWIAERFLKAGKKSAFVFSLGLTILLGIIFLAGQVWEYTGLLTSDISINT 682

Query: 300  RIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*L 479
             ++ +TFF  TGFHGIHV  G + L +  +  L  + +      F A   Y HFVDVV +
Sbjct: 683  DLFSATFFTVTGFHGIHVTAGVIALFVMLLMGLKGNLTSEKTHVFGAVGVYWHFVDVVWI 742

Query: 480  FLYISIY 500
             ++  IY
Sbjct: 743  AVFGIIY 749


>UniRef50_Q9G8R7 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Naegleria gruberi|Rep: Cytochrome c oxidase subunit 3 -
           Naegleria gruberi
          Length = 297

 Score = 68.9 bits (161), Expect = 7e-11
 Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPS-RITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENN 194
           YF  +FH   +P +  G + P    +  +N +  PL    +L+ SG     A+++    +
Sbjct: 120 YFDRYFH---TPAVLGGTLAPLGIELVSWNAY--PLWGCFVLLASGWACNQAYYAARGGS 174

Query: 195 FSQTKQRLFLTILLGFYFTI-LQAYEYIEAS-FTIADRIYGSTFFIATGFHGIHVIIGTL 368
            +         I LG  F   +Q  EY+  +  +I+D + GS +++ TGFHG+HV IG +
Sbjct: 175 STMFYLWSVYGIALGVIFVFFIQLSEYVATNTLSISDSVVGSCYYLITGFHGLHVCIGLI 234

Query: 369 FLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           FL I  ++  +    ++    +  A  Y HFVD + LF+Y+ +Y
Sbjct: 235 FLAIATVQLDSYTIDRDRILVYALALTYRHFVDWIWLFVYLFLY 278


>UniRef50_A7BSH5 Cluster: Cytochrome c oxidase aa3, subunit III;
           n=1; Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3,
           subunit III - Beggiatoa sp. PS
          Length = 270

 Score = 68.5 bits (160), Expect = 9e-11
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
 Frame = +3

Query: 105 PFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---I 275
           P  +PL+ T++L+ S  T+  A   L  N+ +  K  L +T+LLG  F  +   E+    
Sbjct: 137 PTIMPLIMTLVLVSSSFTIHFAEVKLEHNDRAGFKMWLGITMLLGAIFLSMSIIEWTHLF 196

Query: 276 EASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y* 455
              F     IY ++FF  TGFHG HVI+G    +   I  +    + N     +A + Y 
Sbjct: 197 HEGFAFWTNIYSTSFFTITGFHGAHVIVGLGIFIAILIPAILGKINDNF---VKAGSLYW 253

Query: 456 HFVDVV*LFLYISIY 500
           HFVD++  F+   +Y
Sbjct: 254 HFVDIIWFFVVSQVY 268


>UniRef50_Q12MS5 Cluster: Cytochrome c oxidase, subunit III; n=2;
           Alteromonadales|Rep: Cytochrome c oxidase, subunit III -
           Shewanella denitrificans (strain OS217 / ATCC BAA-1090 /
           DSM 15013)
          Length = 212

 Score = 66.9 bits (156), Expect = 3e-10
 Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
 Frame = +3

Query: 114 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEAS 284
           I LL T+ L+ S   +  A  +  + +  +    L   +L  F + + + +EY   I A 
Sbjct: 78  IGLLCTLSLLMSSYLLALALVNAKQGHNIRVSHLLRGALLFAFIYLVAKIWEYALLINAG 137

Query: 285 FTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFV 464
           F ++   + + +F+ TGFH +HV++G + L+  + +     +  N + GFEAAA Y H V
Sbjct: 138 FDLSTNDFFTLYFLITGFHFMHVVLGCMILVYLHQQSRQQRYGPNDYRGFEAAAAYWHMV 197

Query: 465 DVV*LFLYISIY 500
           D+V + ++  IY
Sbjct: 198 DLVWILVFFLIY 209


>UniRef50_A3JBU2 Cluster: Cytochrome c oxidase subunit III family
           protein; n=2; Marinobacter|Rep: Cytochrome c oxidase
           subunit III family protein - Marinobacter sp. ELB17
          Length = 194

 Score = 66.5 bits (155), Expect = 4e-10
 Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
 Frame = +3

Query: 114 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEA---S 284
           I LLNT  LI S   V  A H    +  S  + RL+L + +   +T+ + YEY++     
Sbjct: 61  IGLLNTFALISSSYLVATAVHQF-RDKLSGVQWRLWLAVAVSCIYTVGKLYEYVDLYSQG 119

Query: 285 FTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFV 464
           + +    +   +F  T FH +HVI+G + L++  ++  N  +  +   G E+ A Y H V
Sbjct: 120 YNLGTDTFFMFYFFLTFFHFMHVILGQIVLMVLAVKIGNGDYDGSDMNGIESGASYWHMV 179

Query: 465 DVV*LFLYISIY 500
           D+V L L+  +Y
Sbjct: 180 DLVWLALFPMLY 191


>UniRef50_P24012 Cluster: Cytochrome c oxidase subunit 3 (EC
           1.9.3.1) (Cytochrome c oxidase polypeptide III)
           (Cytochrome aa3 subunit 3) (Caa-3605 subunit 3) (Oxidase
           aa(3) subunit 3); n=27; Bacillaceae|Rep: Cytochrome c
           oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c oxidase
           polypeptide III) (Cytochrome aa3 subunit 3) (Caa-3605
           subunit 3) (Oxidase aa(3) subunit 3) - Bacillus subtilis
          Length = 207

 Score = 66.1 bits (154), Expect = 5e-10
 Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
 Frame = +3

Query: 129 TIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYI----EASFTIA 296
           T++L+ S +T   A + +   +F + +  L +TILLG  F  L+ YE+     E  FTI 
Sbjct: 74  TMLLLTSSLTSVYAMYHMKNFSFGKMQLWLGITILLGAGFLGLEIYEFKHYTHEFGFTIT 133

Query: 297 DRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV* 476
               GS F+   G HG HV  G +++    IR+     +      F  A+ Y HF+DVV 
Sbjct: 134 SSALGSAFYTLVGTHGAHVAFGLMWISTLMIRNAKRGLNLYTAPKFYVASLYWHFIDVVW 193

Query: 477 LFLYISIY 500
           +F++  +Y
Sbjct: 194 VFIFTVVY 201


>UniRef50_A4BMN0 Cluster: Putative additional subunit of nitric
           oxide reductase (Nor) complex, membrane protein; n=1;
           Nitrococcus mobilis Nb-231|Rep: Putative additional
           subunit of nitric oxide reductase (Nor) complex,
           membrane protein - Nitrococcus mobilis Nb-231
          Length = 198

 Score = 64.9 bits (151), Expect = 1e-09
 Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
 Frame = +3

Query: 126 NTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFTIA 296
           NT++LI     V  A  S+ +         L   +  G  F +++  EY   I+A + + 
Sbjct: 68  NTLVLITGSFFVASAVRSIRQGCIRACVLLLLGGMATGALFALIKIAEYQALIDAGYRLG 127

Query: 297 DRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV* 476
             I+ S +F+ATGFH +HV+I  L LLI  +R L   +  +   G E AA + H VD+V 
Sbjct: 128 TSIFYSFYFLATGFHLLHVLIAMLVLLIVAVRCLFGAYDADSPTGIETAASFWHMVDLVW 187

Query: 477 LFLYISIY 500
           + L+  +Y
Sbjct: 188 IVLFPLLY 195


>UniRef50_Q8D352 Cluster: CyoC protein; n=1; Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis|Rep:
           CyoC protein - Wigglesworthia glossinidia brevipalpis
          Length = 205

 Score = 64.5 bits (150), Expect = 1e-09
 Identities = 41/136 (30%), Positives = 74/136 (54%), Gaps = 5/136 (3%)
 Frame = +3

Query: 108 FQIPL--LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYF---TILQAYEY 272
           F+IPL  L TIIL+ S +T + A  S+ +NN  +T   LF+T++LG  F    I + Y  
Sbjct: 64  FEIPLVFLETIILLSSSMTCSIASFSIKKNNKIKTNIWLFITVILGIIFINIEISEFYSL 123

Query: 273 IEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y 452
           I  ++      + S FF   G HG+HVI G +++++  I+       K +    +  + +
Sbjct: 124 ICKNYGPDRSAFLSIFFTIVGTHGVHVISGIIWMIVIMIQIYFYGCDKINKIRLKLLSLF 183

Query: 453 *HFVDVV*LFLYISIY 500
            +F++++ +F++  IY
Sbjct: 184 WYFLEIIWIFVFNVIY 199


>UniRef50_UPI0000DAE542 Cluster: hypothetical protein
           Rgryl_01000587; n=1; Rickettsiella grylli|Rep:
           hypothetical protein Rgryl_01000587 - Rickettsiella
           grylli
          Length = 306

 Score = 63.7 bits (148), Expect = 3e-09
 Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
 Frame = +3

Query: 114 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFT- 290
           +PL+N I+L+ S   ++ AH+   + N    +    L I   F F I Q Y +I +  T 
Sbjct: 176 LPLINLIVLLASAFCLSAAHYHFKKINGPYCRLSFNLAICFAFIFVISQFYYFIHSLNTH 235

Query: 291 -IADR-IYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFV 464
            I  R ++GS      GFH ++ +    FLL  Y R+  N F KN  F F+A+  +  F+
Sbjct: 236 VITQRGVWGSFLIAFLGFHLLNCVAALFFLLFLYTRYCKNAFEKN-IFSFDASVWWWDFL 294

Query: 465 DVV*LFLYISIY 500
            ++ +F +  I+
Sbjct: 295 TIIWVFGFFLIF 306


>UniRef50_Q70US2 Cluster: Cytochrome c oxidase subunit 3; n=3;
           Onchocercidae|Rep: Cytochrome c oxidase subunit 3 -
           Dirofilaria immitis (Canine heartworm)
          Length = 259

 Score = 62.9 bits (146), Expect = 4e-09
 Identities = 29/84 (34%), Positives = 46/84 (54%)
 Frame = +3

Query: 216 LFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRH 395
           L   I +G  F   Q YEY +  F + D IYGS F++ TG HG HV++G  FL++ + R 
Sbjct: 161 LLFCIFVGSGFLCFQFYEYSDNCFGMNDSIYGSIFYVGTGLHGFHVLVGVFFLMVNFFRI 220

Query: 396 LNNHFSKNHHFGFEAAA*Y*HFVD 467
              +F+  H   ++ +  Y  F++
Sbjct: 221 KLFNFNWYHIQAYDMSIDYWRFLE 244


>UniRef50_A6GFM9 Cluster: Cytochrome C oxidase subunit III; n=1;
           Plesiocystis pacifica SIR-1|Rep: Cytochrome C oxidase
           subunit III - Plesiocystis pacifica SIR-1
          Length = 223

 Score = 61.7 bits (143), Expect = 1e-08
 Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEAS------ 284
           LNTI+L+ S  T+     +   NN    ++ L +TI+  F F I++ +EY          
Sbjct: 77  LNTIVLLFSSYTMALGVRAAQTNNKKALERNLIITIVCAFIFLIVKYFEYSAKIHHGLLP 136

Query: 285 ---FTIAD---------RIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHF 428
              F  A+         +++   +F  TG HG+HV++G   L    IR   + FS  ++ 
Sbjct: 137 GDLFAAAEHGYHLPKYSKVFYGLYFTMTGLHGVHVVVGIGVLTWILIRARRSEFSSQNYV 196

Query: 429 GFEAAA*Y*HFVDVV*LFLYISIY 500
             E A  Y H VD+V +FL+  +Y
Sbjct: 197 AVENAGIYWHIVDLVWIFLFPLLY 220


>UniRef50_Q83GL6 Cluster: Cytochrome c oxidase subunit III; n=2;
           Tropheryma whipplei|Rep: Cytochrome c oxidase subunit
           III - Tropheryma whipplei (strain Twist) (Whipple's
           bacillus)
          Length = 207

 Score = 60.9 bits (141), Expect = 2e-08
 Identities = 46/142 (32%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQR-----------LFLTILLGFYFTILQAY 266
           L+NT+ILI S VT   A  +     F   ++             +L+  LG  F   Q  
Sbjct: 64  LVNTVILILSSVTCQFAVRA--SERFQPRRRSWQPRDWGAIEWFYLSAFLGLIFLAGQVN 121

Query: 267 EYIE---ASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIR-HLNNHFSKNHHFGF 434
           EY        T+    +GS F++ TGFHG+HV+ G   +L+   R +    FS +     
Sbjct: 122 EYASLYAEGITLKSSAFGSVFYLTTGFHGLHVLGGIAAMLVLIGRFYAVKRFSTHDAVAA 181

Query: 435 EAAA*Y*HFVDVV*LFLYISIY 500
            A + Y HFVD+V +FL+ SIY
Sbjct: 182 IAVSYYWHFVDIVWVFLFSSIY 203


>UniRef50_A0G8T4 Cluster: Cytochrome c oxidase, subunit III; n=6;
           Betaproteobacteria|Rep: Cytochrome c oxidase, subunit
           III - Burkholderia phymatum STM815
          Length = 251

 Score = 60.9 bits (141), Expect = 2e-08
 Identities = 35/125 (28%), Positives = 56/125 (44%)
 Frame = +3

Query: 126 NTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRI 305
           NT IL+ S V V      +           +   ++LG  F  +Q  E+    + +   +
Sbjct: 117 NTAILLSSSVFVWLCERFVKRRRLYWAVAAMSTALVLGVIFVGIQLKEWGNHPYGLTAHL 176

Query: 306 YGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFL 485
           YGS +F  TGFH  HV +G + L +  +     +F +           Y HFVD+V LF+
Sbjct: 177 YGSLYFTITGFHLAHVAVGLVVLSLLLLWTALGYFDERRCLALTIGGLYWHFVDLVWLFI 236

Query: 486 YISIY 500
           + +IY
Sbjct: 237 FTTIY 241


>UniRef50_Q5MCM5 Cluster: Cytochrome c oxidase subunit 3; n=541;
           Coelomata|Rep: Cytochrome c oxidase subunit 3 - Mus
           musculus (Mouse)
          Length = 42

 Score = 60.5 bits (140), Expect = 2e-08
 Identities = 27/38 (71%), Positives = 30/38 (78%)
 Frame = +3

Query: 387 IRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           +R L  HF+  HHFGFEAAA Y HFVDVV LFLY+SIY
Sbjct: 1   LRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIY 38


>UniRef50_Q9F3S7 Cluster: Cytochrome oxidase subunit III; n=3;
           Bacteria|Rep: Cytochrome oxidase subunit III -
           Rhodothermus marinus (Rhodothermus obamensis)
          Length = 226

 Score = 60.5 bits (140), Expect = 2e-08
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 15/141 (10%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEAS----FT 290
           LNTI+L+ S  TV  A H     +  +  Q L+LTI L   F +++ +EY E      F 
Sbjct: 83  LNTIVLLTSSFTVALAVHYAQLGDKKRLVQNLWLTIALAGVFMVVKYFEYSEKFHHHIFP 142

Query: 291 IADRIYG-----------STFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFE 437
             +  Y            S +F+ TG HG+HV++G   L    ++     FS  ++   E
Sbjct: 143 GGNYAYEGLQLPYVGQFFSIYFVMTGIHGLHVLVGMGVLTWVALKAQRGVFSSEYYTPVE 202

Query: 438 AAA*Y*HFVDVV*LFLYISIY 500
            +A Y H VD++ +FL+  +Y
Sbjct: 203 ISALYWHLVDIIWIFLFPLLY 223


>UniRef50_Q9MLI1 Cluster: Cytochrome c oxidase subunit 3; n=3;
           Digenea|Rep: Cytochrome c oxidase subunit 3 -
           Paragonimus westermani
          Length = 214

 Score = 60.5 bits (140), Expect = 2e-08
 Identities = 40/130 (30%), Positives = 63/130 (48%)
 Frame = +3

Query: 111 QIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFT 290
           ++PLL + +LI S VT T  HH         +   L +T+LLG  F +LQ +E+ +    
Sbjct: 90  ELPLLGSFLLIGSSVTATTYHHC---RGLEISWVFLGVTVLLGLSFVLLQVFEFYDCECD 146

Query: 291 IADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDV 470
           +   +Y +  F   G H  HV +G + L    +  L  +  K  +     A  Y HFVD 
Sbjct: 147 VLSDVYYAGAFCTVGLHFSHVFVGVVGLSTLML--LGANAVKQCY--ANVAVWYWHFVDY 202

Query: 471 V*LFLYISIY 500
           V LF+++ +Y
Sbjct: 203 VWLFVFLLLY 212


>UniRef50_Q36675 Cluster: Cytochrome c oxidase subunit 3; n=46;
           Haemosporida|Rep: Cytochrome c oxidase subunit 3 -
           Plasmodium vivax
          Length = 263

 Score = 59.7 bits (138), Expect = 4e-08
 Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFS-QTKQRLFLTILLGFYFTILQAYEYIEASFTIA 296
           +L    ++ S   +T     LIE   S +    +F+  LLG  F  LQ  EY+   + I 
Sbjct: 121 ILTITFILASASCMTACLQFLIEKGMSLEISSIVFIIYLLGECFASLQTTEYLHLGYCIN 180

Query: 297 DRIYGSTFFIATGFHGIHVIIGTLFLLICYIR 392
           D I G+ F+  TG H  HVI+G L LLI +IR
Sbjct: 181 DAISGTLFYCVTGLHFSHVIVGLLLLLIYFIR 212


>UniRef50_Q2IP50 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Anaeromyxobacter dehalogenans 2CP-C|Rep: Cytochrome c
           oxidase, subunit III - Anaeromyxobacter dehalogenans
           (strain 2CP-C)
          Length = 209

 Score = 59.3 bits (137), Expect = 5e-08
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIE--ASFTI 293
           L+NTIIL+ S  TV    +  ++ N  +T     +++     F  L+A EY        +
Sbjct: 66  LVNTIILVTSSFTVALGLNEAVKGNGKKTGLWFAVSVAFAIAFLALKAVEYSHHFQEGQL 125

Query: 294 ADRIYG-------------STFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGF 434
             R Y              S +F+ TG HG+HVI+G   L +  ++     ++  +H   
Sbjct: 126 PGRYYSFHELQAPGASLFFSLYFLITGLHGVHVIVGMTILAVVGVKAARGKYTAAYHTPV 185

Query: 435 EAAA*Y*HFVDVV*LFLYISIY 500
           E A  Y H VD++ +F++  IY
Sbjct: 186 ELAGLYWHLVDLIWIFVFPLIY 207


>UniRef50_A3TK93 Cluster: Cytochrome C oxidase subunit III; n=1;
           Janibacter sp. HTCC2649|Rep: Cytochrome C oxidase
           subunit III - Janibacter sp. HTCC2649
          Length = 222

 Score = 59.3 bits (137), Expect = 5e-08
 Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
 Frame = +3

Query: 222 LTILLGFYFTILQAYEY---IEASFTIADRIYGSTFFIATGFHGIHVIIGTL-FLLICYI 389
           LT + G  F   Q YEY   +    T++   Y S F++ATGFHG+HV  G + FLLI   
Sbjct: 123 LTYIFGATFIAGQVYEYAHLVAEGVTLSTNSYSSIFYLATGFHGMHVTGGLIAFLLIIGR 182

Query: 390 RHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
                 ++     G    + Y HFVDVV + L+  IY
Sbjct: 183 TFTTRRYTHLQETGAIVTSYYWHFVDVVWIALFAMIY 219


>UniRef50_A2T843 Cluster: Cytochrome c oxidase subunit 3; n=18;
           Eucestoda|Rep: Cytochrome c oxidase subunit 3 -
           Diphyllobothrium latum
          Length = 216

 Score = 59.3 bits (137), Expect = 5e-08
 Identities = 42/139 (30%), Positives = 66/139 (47%)
 Frame = +3

Query: 84  SRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQA 263
           S I+  +  +IP +   +L+ S ++VT  HH +    +  +   L LT LLG  F ILQ 
Sbjct: 81  SFISLSSSLEIPFMGCFLLLGSSISVTGFHHVMF---WPYSWVLLLLTTLLGSGFIILQL 137

Query: 264 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAA 443
           +E+ E    + D  + ++ F   G H +HV IG + L I  I +L         +     
Sbjct: 138 FEFNEIFINLIDSSFYASCFCTVGLHFLHVFIGVIGLSI--ILYLG--VKSAGAYRCTVV 193

Query: 444 A*Y*HFVDVV*LFLYISIY 500
             Y HFVD + L +Y  +Y
Sbjct: 194 TWYWHFVDYIWLLVYACVY 212


>UniRef50_A2D6E2 Cluster: Cytochrome c oxidase subunit 3; n=2;
           Gyrodactylus|Rep: Cytochrome c oxidase subunit 3 -
           Gyrodactylus salaris (Flatworm)
          Length = 212

 Score = 59.3 bits (137), Expect = 5e-08
 Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
 Frame = +3

Query: 111 QIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFT 290
           ++PLL + +L+ S VT T  H  +       +   L LTILLG  F +LQ  EY E++  
Sbjct: 90  ELPLLGSFLLLGSSVTATCYHLQM-----KLSSLHLILTILLGVLFIVLQGVEYDESTVN 144

Query: 291 IADRIYGSTFFIATGFHGIHVIIGTLFL--LICYIRHLNNHFSKNHHFGFEAAA*Y*HFV 464
           +   +Y ++ F     H  HV+IG   L  L+ Y   +   +  N          Y HFV
Sbjct: 145 LFSSVYHASCFTTISLHFSHVLIGIFLLGGLLLYTPSVVKLYYSN------LVIWYWHFV 198

Query: 465 DVV*LFLYISIY 500
           D + L +Y  +Y
Sbjct: 199 DYIWLLVYSVVY 210


>UniRef50_O67932 Cluster: Cytochrome c oxidase subunit III; n=1;
           Aquifex aeolicus|Rep: Cytochrome c oxidase subunit III -
           Aquifex aeolicus
          Length = 258

 Score = 58.0 bits (134), Expect = 1e-07
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIEN-NFSQTKQRLFLTILLGFYFTILQAYEYIEA---SFT 290
           L T+IL  S  T+  A   L E  N  +  + +F T +LG  F IL   E+       FT
Sbjct: 122 LLTLILWASSYTIWKAETILEEEGNNGKALKWVFFTFVLGLLFVILHVNEWKHLWHEGFT 181

Query: 291 IADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDV 470
           ++  +YG+ F+  TG H  HV++G +  L C         ++       A + Y HFVD 
Sbjct: 182 LSSNMYGTGFYALTGLHTSHVLLGLIMQLYCMWLLATGKMTQLRPTVLRATSAYWHFVDF 241

Query: 471 V*LFLYISIY 500
           + L +  S+Y
Sbjct: 242 MWLLVAGSVY 251


>UniRef50_Q1D5M6 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
           subunit III - Myxococcus xanthus (strain DK 1622)
          Length = 207

 Score = 57.2 bits (132), Expect = 2e-07
 Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYI--------- 275
           LNT +L+ S + V  A  ++           L L++LLG  F  ++A EY          
Sbjct: 65  LNTFVLVVSSILVALAVDAIRNGRDFAAAALLALSVLLGIAFLFIKAAEYTKHVHDGALP 124

Query: 276 ------EASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFE 437
                 EA       +Y + +++ TG H +HV++G   L+   +R L   F    H   E
Sbjct: 125 GAWYAYEAFALPGANLYFTLYWVMTGVHAVHVLVGVGVLVTLALRTLAGEFGARFHTPVE 184

Query: 438 AAA*Y*HFVDVV*LFLYISIY 500
               Y H VDVV LFL+  +Y
Sbjct: 185 LGGMYWHLVDVVWLFLWPLLY 205


>UniRef50_A4A2K1 Cluster: Cytochrome C oxidase subunit III; n=1;
           Blastopirellula marina DSM 3645|Rep: Cytochrome C
           oxidase subunit III - Blastopirellula marina DSM 3645
          Length = 203

 Score = 56.0 bits (129), Expect = 5e-07
 Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASF---- 287
           ++N+  L+ S  T+  A ++    + +     +F TI LG  F +  AYE+ E  +    
Sbjct: 70  VINSAFLLGSSGTIMLAMNARKAKSLNGFSVWMFGTITLGVLFLVGTAYEWEELIYQDGL 129

Query: 288 TIADRIYGSTFFIATGFHGIHVIIGTLFL-LICYIRHLNNHFSKNHHFGFEAAA*Y*HFV 464
           TI   ++G+TF+   GFH  HV +G + L +I ++       +K+     E  + Y HFV
Sbjct: 130 TIGRNLFGTTFYTLIGFHAFHVTLGLVLLTVITFLERAGRLSAKSE--ATELVSWYWHFV 187

Query: 465 DVV*LFLYISIY 500
           D V + ++  +Y
Sbjct: 188 DAVWIVIFGVVY 199


>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
            cellular organisms|Rep: Cytochrome C oxidase subunit I
            /III - Pyrobaculum aerophilum
          Length = 800

 Score = 56.0 bits (129), Expect = 5e-07
 Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
 Frame = +3

Query: 81   PSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFT--- 251
            P  ITP     I +  +I L  S  T   A  + ++ N       L  T+ LG +F    
Sbjct: 648  PQLITP-----ISIAMSIALWSSSFTAMVARRNFLKGNLKGFYAWLAATMALGIFFVGGQ 702

Query: 252  -ILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHF 428
             +++  E     F     I  + F+     HG HVI+G +F  +  +     ++  N   
Sbjct: 703  FLIEYPELAHHGFVYGTSIIANYFYAIVTLHGFHVIVGLVFWALVALFVAVGYWRPNRPD 762

Query: 429  GFEAAA*Y*HFVDVV*LFLYISIY 500
            G EAA  Y HFVD + + L+I+ Y
Sbjct: 763  GVEAAEYYWHFVDAIWVLLFITFY 786


>UniRef50_Q482H7 Cluster: Cytochrome c oxidase subunit III family
           protein; n=1; Colwellia psychrerythraea 34H|Rep:
           Cytochrome c oxidase subunit III family protein -
           Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
           (Vibriopsychroerythus)
          Length = 174

 Score = 55.6 bits (128), Expect = 7e-07
 Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 3/130 (2%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYI---EASFT 290
           L+NTI LI S   V  A   + +    Q    L         +  ++ +EY+   E   T
Sbjct: 43  LINTIALITSSFFVAIALTKIHKAQAKQAVLLLLTAKAFAIIYISVKIWEYLSLFEQGIT 102

Query: 291 IADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDV 470
           I    + + +F+ T FH +HV++G + L           +  N   GFEA   Y H VD+
Sbjct: 103 IETNTFFTLYFLITAFHLMHVLLGMVILAFIAYSAWQGKYQNNEISGFEAGTSYWHMVDL 162

Query: 471 V*LFLYISIY 500
           + + L+  IY
Sbjct: 163 LWIILFPLIY 172


>UniRef50_A1ZL80 Cluster: Cytochrome c oxidase subunit III; n=3;
           Flexibacteraceae|Rep: Cytochrome c oxidase subunit III -
           Microscilla marina ATCC 23134
          Length = 202

 Score = 55.6 bits (128), Expect = 7e-07
 Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLI---ENNFSQTKQRLFLTILLGFYFTILQAYEY---IEAS 284
           +NTII++ S  ++   H SLI   ++N    K  + +T LLGF F + Q Y +   + +S
Sbjct: 68  VNTIIILMSSASM---HWSLILAKKDNIDLLKIAVVITSLLGFAFLVGQLYAWKDLVASS 124

Query: 285 FTIA---DRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y* 455
              A       GS  ++ TG H +H+I G +FL I  +               E  A Y 
Sbjct: 125 VWFAGEQSNPAGSFLYVITGLHAVHLISGIVFLAIVLVSTFRLKIHSKRLARIEMCATYW 184

Query: 456 HFVDVV*LFLY 488
           HF+D++ L+L+
Sbjct: 185 HFLDILWLYLF 195


>UniRef50_A4AQT5 Cluster: Putative additional subunit of nitric
           oxide reductase (Nor) complex, membrane protein; n=1;
           Flavobacteriales bacterium HTCC2170|Rep: Putative
           additional subunit of nitric oxide reductase (Nor)
           complex, membrane protein - Flavobacteriales bacterium
           HTCC2170
          Length = 193

 Score = 55.2 bits (127), Expect = 9e-07
 Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
 Frame = +3

Query: 114 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEAS 284
           I  +NT+ LI SG  +  +   L  N  +++   L LT+  G  F  L++ EY   I+A 
Sbjct: 60  IGTINTLFLISSGYFMARSVGYLKSNEKNRSLFFLKLTMFGGLLFLALKSVEYYFKIDAG 119

Query: 285 FTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFV 464
            T+    + + +++ T FH IHVI+G + L   Y   L    S       EA+A + H  
Sbjct: 120 LTVGHNTFFTFYWMLTLFHVIHVIVGLVILASVYF-GLKKEISTVSIDDMEASAAFWHMC 178

Query: 465 DVV*LFLYISIY 500
           D++ L L+  IY
Sbjct: 179 DLIWLLLFPVIY 190


>UniRef50_Q0A6S9 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Alkalilimnicola ehrlichei MLHE-1|Rep: Cytochrome c
           oxidase, subunit III - Alkalilimnicola ehrlichei (strain
           MLHE-1)
          Length = 198

 Score = 54.8 bits (126), Expect = 1e-06
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIE---ASFTI 293
           LNT+IL+ SG+    A  ++      + +Q L   ++LG  F +++  EY +   A  T 
Sbjct: 75  LNTLILLTSGLFAALALEAVAVGGVRRCRQWLLAAMVLGLVFAVIKVVEYADKLGAGLTP 134

Query: 294 ADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV 473
               + + +++ TGFH  HV+ G + L +   R    H         E    + H VD+V
Sbjct: 135 ESNTFFTFYYLLTGFHFAHVVFGLVLLALVVWRPRMTH--------VETGTAFWHMVDLV 186

Query: 474 *LFLYISIY 500
            + LY  IY
Sbjct: 187 WVLLYPLIY 195


>UniRef50_A6DSP2 Cluster: Cytochrome c oxidase subunit III; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Cytochrome c oxidase
           subunit III - Lentisphaera araneosa HTCC2155
          Length = 219

 Score = 54.8 bits (126), Expect = 1e-06
 Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFTI 293
           +NT+ILI S VT+  A   +  N   +    L  T+L G  F +++ +EY    E     
Sbjct: 76  VNTVILITSSVTMAVAIREVQLNRKGRALALLLFTVLCGMGFLVVKYFEYSHKFELGIFP 135

Query: 294 AD------------RIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFE 437
            D             +Y S +F+AT  H +HVI+G + +L    R     F + ++   E
Sbjct: 136 GDFFSFMGDHMSNEHLYFSIYFMATATHVLHVILGLIAILWVSWRTAKGEFYEAYYTPVE 195

Query: 438 AAA*Y*HFVDVV*LFLYISIY 500
               Y H VD++ +FL+  +Y
Sbjct: 196 MVGLYWHLVDLIWIFLFPLLY 216


>UniRef50_Q057F0 Cluster: Cytochrome o ubiquinol oxidase subunit
           III; n=1; Buchnera aphidicola str. Cc (Cinara
           cedri)|Rep: Cytochrome o ubiquinol oxidase subunit III -
           Buchnera aphidicola subsp. Cinara cedri
          Length = 194

 Score = 54.0 bits (124), Expect = 2e-06
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
 Frame = +3

Query: 216 LFLTILLGFYFTILQAYEY---IEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICY 386
           LF+T++LG  F  L+ +E+   IE  F      Y S+F++    HG+HVI G L+++I  
Sbjct: 95  LFITLILGSTFISLEFFEFLNIIEKGFFPNTNGYFSSFYVLLCIHGLHVIFGLLWIIISI 154

Query: 387 IRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
            +     FS   +        + HF+D++ + L   +Y
Sbjct: 155 FQFFFLKFSNFLYISLICCCLFWHFLDIIWIILIFCVY 192


>UniRef50_Q1I0P3 Cluster: Cytochrome c oxidase subunit 3; n=3;
           Schistosoma|Rep: Cytochrome c oxidase subunit 3 -
           Schistosoma haematobium (Blood fluke)
          Length = 221

 Score = 54.0 bits (124), Expect = 2e-06
 Identities = 34/131 (25%), Positives = 64/131 (48%)
 Frame = +3

Query: 108 FQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASF 287
           F +P++ T +L+ S + ++  H  +  ++ S+    ++L +L    F      E+  +SF
Sbjct: 91  FSVPIIETYLLVMSSLMISMFHSGVASDHSSKY---IYLALLFSLVFICFAVDEFFNSSF 147

Query: 288 TIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVD 467
                 Y ++ F+  G H  HV++G+L L+   + H N   S+      E    Y HFVD
Sbjct: 148 NSLCSPYYASCFMLVGLHLSHVVVGSLGLI--ELIHFNE--SELVRSKSEMIVIYWHFVD 203

Query: 468 VV*LFLYISIY 500
            + L ++I +Y
Sbjct: 204 FIWLLVFIVVY 214


>UniRef50_Q83CR9 Cluster: Cytochrome o ubiquinol oxidase, subunit
           III; n=3; Legionellales|Rep: Cytochrome o ubiquinol
           oxidase, subunit III - Coxiella burnetii
          Length = 198

 Score = 53.6 bits (123), Expect = 3e-06
 Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
 Frame = +3

Query: 66  GRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFY 245
           G + PP  + P       L+ T  L+ S  T   A   + +N        L LT +LG  
Sbjct: 47  GAVGPP--LKPLIDLPYVLVETFFLLASNFTFCLAIFGINKNKLPAVIFWLILTFILGAG 104

Query: 246 FTILQAYEYIEASFT-IADRIYG--STFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSK 416
           F +++  E+I  +    +  + G  S FF   G HG HV +G L++LI  I+      +K
Sbjct: 105 FVVMEVMEFIHLNAEGYSWHVSGAASAFFTLVGTHGFHVTMGLLWILIMIIQLPILKINK 164

Query: 417 NHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           N          + +F+D+V +FL+  +Y
Sbjct: 165 NTARRMVYLGLFWNFLDIVWIFLFTIVY 192


>UniRef50_Q6MR13 Cluster: Cytochrome c oxidase subunit III; n=5;
           Bacteria|Rep: Cytochrome c oxidase subunit III -
           Bdellovibrio bacteriovorus
          Length = 221

 Score = 53.6 bits (123), Expect = 3e-06
 Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
 Frame = +3

Query: 108 FQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY----- 272
           +++  +NT++LI S  T+  +   + +N   +    L  T+L G  F +++ +EY     
Sbjct: 71  WKMGFVNTLVLIFSSFTMAISISFIQKNQQKKAVLALATTVLCGAIFMVIKYFEYQHKFH 130

Query: 273 --------IEASFTIADR----IYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSK 416
                   ++ +   A+     +Y   +++ TG HGIHV++G   +  C IR +   F  
Sbjct: 131 LGLFPGKFLDVAKVGAEHANLGLYFGFYYVMTGLHGIHVLLGMGLITWCLIRTMRGDFHS 190

Query: 417 NHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
            +    E    + H VD++ +FL+  +Y
Sbjct: 191 QYWIVVEGVGLFWHIVDLIWIFLFPLLY 218


>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
            Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
            Haloarcula marismortui (Halobacterium marismortui)
          Length = 854

 Score = 53.6 bits (123), Expect = 3e-06
 Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
 Frame = +3

Query: 120  LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY-------IE 278
            L+NT +L+ S   V  A  +    +   T   L  T  LG  F I +  E+        E
Sbjct: 717  LINTYLLLTSSFLVVLAMVAAERESKRGTVAALVGTFALGVGFLINKGIEWNHLFHISTE 776

Query: 279  A---SFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA* 449
            A    + ++  I  STF++ TG HG HVIIG +      +R  N  +  +     E    
Sbjct: 777  AFPNGWNLSTNIASSTFYLTTGLHGAHVIIGLIICAYMTVRAWNGAYQGDDR-AIEYFGL 835

Query: 450  Y*HFVDVV*LFLYISIY 500
            Y HFVD+V LFL+   Y
Sbjct: 836  YWHFVDIVWLFLFPLFY 852


>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
            Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
            Sulfolobus acidocaldarius
          Length = 788

 Score = 53.6 bits (123), Expect = 3e-06
 Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
 Frame = +3

Query: 108  FQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASF 287
            F +P + T IL+ S +    A+    + N    +    LT+ +G  F   Q YE+     
Sbjct: 655  FPLPAIMTAILLSSSIPAHIAYEYFKKGNVKMFRNLGLLTMAMGLTFLGGQIYEFTHYIH 714

Query: 288  TIADRIYGSTFFIAT-GFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFV 464
             I      S+FF AT   HG HVI+G +      +R +   F    + G  AA  Y HFV
Sbjct: 715  FIPQDSAASSFFFATVSLHGFHVIMGLVIWAFMMLR-IRKGFIP--YAGSVAATYYWHFV 771

Query: 465  DVV*LFLYISIY 500
            D V + ++ + Y
Sbjct: 772  DAVWVVVFSTFY 783


>UniRef50_Q1ZQK0 Cluster: Cytochrome c oxidase, subunit III; n=13;
           Gammaproteobacteria|Rep: Cytochrome c oxidase, subunit
           III - Vibrio angustum S14
          Length = 214

 Score = 52.4 bits (120), Expect = 6e-06
 Identities = 32/143 (22%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
 Frame = +3

Query: 87  RITPFNPFQIPLL--NTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQ 260
           +I P   F +  +   T +L+ S  T   A     + +     + L +T  LG  F +++
Sbjct: 67  QIEPTELFNLTFVAGETALLLLSSFTFGMAMLKANKEDMKGMLKWLGITFALGLSFLVME 126

Query: 261 AYEYIEAS---FTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFG 431
            YE+   S    T     Y S+F+     HG+HV  G +++++ ++    + FS+++   
Sbjct: 127 LYEFWHFSNEGATFHSSAYWSSFYALVATHGLHVFAGLIWMIVLFVHFKRDGFSEDNKTR 186

Query: 432 FEAAA*Y*HFVDVV*LFLYISIY 500
               + + HF+DV+ + ++  +Y
Sbjct: 187 LACLSLFWHFLDVIWICVFSVVY 209


>UniRef50_P14546 Cluster: Cytochrome c oxidase subunit 3; n=10;
           Trypanosomatidae|Rep: Cytochrome c oxidase subunit 3 -
           Leishmania tarentolae (Sauroleishmania tarentolae)
          Length = 284

 Score = 52.4 bits (120), Expect = 6e-06
 Identities = 37/127 (29%), Positives = 52/127 (40%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIAD 299
           L+NT +L  SG+ V           F      L++ IL GF F   Q +E+     T + 
Sbjct: 147 LINTFLLFVSGLFVNFVLFLFWFRFFLCVLFMLWVGILFGFLFLWNQVWEFALLFVTCSC 206

Query: 300 RIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*L 479
            ++GS  F+    H  HV +G   L +C+ R  N                Y HFVD V  
Sbjct: 207 GVFGSILFLIDLLHFSHVFLGIFLLFLCFSRCFNFLCMDTRFVFLYVVCLYWHFVDCVWF 266

Query: 480 FLYISIY 500
           FL   +Y
Sbjct: 267 FLLRFVY 273


>UniRef50_A3ZTG4 Cluster: Cytochrome c oxidase subunit III; n=1;
           Blastopirellula marina DSM 3645|Rep: Cytochrome c
           oxidase subunit III - Blastopirellula marina DSM 3645
          Length = 358

 Score = 52.0 bits (119), Expect = 8e-06
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = +3

Query: 261 AYEYIEASFTI-ADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFE 437
           +Y++++  F I +  ++ ST+F+ TGFH +HVI+G +   I     L     K +    E
Sbjct: 280 SYDWLDLPFVIPSGNMWASTYFLLTGFHALHVIVGLIVFAIALPATLG--VGKANF--IE 335

Query: 438 AAA*Y*HFVDVV*LFLYISIY 500
           AA  Y HFVD+V +FL+  +Y
Sbjct: 336 AAGLYWHFVDLVWIFLFPILY 356


>UniRef50_A1VD48 Cluster: Cytochrome c oxidase, subunit III; n=4;
           Bacteria|Rep: Cytochrome c oxidase, subunit III -
           Desulfovibrio vulgaris subsp. vulgaris (strain DP4)
          Length = 209

 Score = 52.0 bits (119), Expect = 8e-06
 Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 15/141 (10%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---------- 272
           +NT++LI S VTV  +  +L   N  +  + L+ T+ L   F + + +E+          
Sbjct: 68  VNTVVLITSSVTVAQSITALRLGNPDRACKLLYATVALAGMFMVNKFFEWSAKIAHDIYP 127

Query: 273 -----IEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFE 437
                +EA   +   I+ S +++ TG HGIHVIIG   LL         H + + +   E
Sbjct: 128 GSAHLLEAQDGLG--IFFSLYYVMTGLHGIHVIIGAAVLLYALRGIRKGHVNADDYVLLE 185

Query: 438 AAA*Y*HFVDVV*LFLYISIY 500
            +  Y H VD+V ++L+   Y
Sbjct: 186 NSGLYWHLVDLVWIYLFPLFY 206


>UniRef50_Q1NH56 Cluster: Putative uncharacterized protein; n=1;
           Sphingomonas sp. SKA58|Rep: Putative uncharacterized
           protein - Sphingomonas sp. SKA58
          Length = 193

 Score = 51.2 bits (117), Expect = 1e-05
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
 Frame = +3

Query: 111 QIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEA 281
           ++ LLNT++L+ S + V  A  + +     + ++ L   ILLG  F I++A+EY   I  
Sbjct: 60  RLGLLNTLLLLTSSLFVAQAV-AAVRRGDDRARRLLLGAILLGSGFVIVKAFEYSAKIAQ 118

Query: 282 SFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HF 461
            FT+    +   +++ TG H +HV+IG   L     R       +      E +  + H 
Sbjct: 119 GFTLNSNSFSIYYYMFTGIHLVHVLIGLGVLCFTLSRFDRAGRMQGGVALIEGSGAFWHL 178

Query: 462 VDVV*LFLYISIY 500
           VD++ + L+  +Y
Sbjct: 179 VDLLWIILFALLY 191


>UniRef50_A7H8L5 Cluster: Cytochrome c oxidase subunit III; n=3;
           Cystobacterineae|Rep: Cytochrome c oxidase subunit III -
           Anaeromyxobacter sp. Fw109-5
          Length = 211

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
 Frame = +3

Query: 114 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY------- 272
           I ++NTI+L+ S  TV          +   T+    ++ LL   F   +A EY       
Sbjct: 66  IGVVNTIVLVTSSFTVAMGLDRQTRGDGRGTRLLFAVSFLLAVVFLGFKAVEYSHHFHAG 125

Query: 273 -IEASFTIADRIYG-------STFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHF 428
            +   F  ++   G       + +F+ TG H IHV+IG   L I   R  +  ++  +H 
Sbjct: 126 ELPGRFYTSEHAQGPGGPIFYALYFLITGLHAIHVVIGMTVLAIIGWRAGSGAYTAEYHV 185

Query: 429 GFEAAA*Y*HFVDVV*LFLYISIY 500
             E A  Y H VD++ +F++  IY
Sbjct: 186 PVELAGLYWHLVDLIWIFVFPLIY 209


>UniRef50_A6C0L4 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase,
           subunit III - Planctomyces maris DSM 8797
          Length = 326

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 26/70 (37%), Positives = 39/70 (55%)
 Frame = +3

Query: 291 IADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDV 470
           I   ++ S +F+ TGFH +HV+IG L  +I  ++      SK  +   E    Y HFVD+
Sbjct: 257 IYGNLFASVYFLLTGFHALHVVIGMLLFIIVLMQ--GRRLSKKWNDYVENIGLYWHFVDL 314

Query: 471 V*LFLYISIY 500
           V +FL+  IY
Sbjct: 315 VWIFLFPLIY 324



 Score = 37.5 bits (83), Expect = 0.19
 Identities = 20/50 (40%), Positives = 29/50 (58%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY 272
           LNT +LI S   V  A   +   NF++ ++ L LT+LL   F  ++AYEY
Sbjct: 56  LNTFVLILSSYFVVLALEGMKVENFAKARRYLCLTLLLACLFLGIKAYEY 105


>UniRef50_A3HZ93 Cluster: Cytochrome c oxidase subunit III; n=1;
           Algoriphagus sp. PR1|Rep: Cytochrome c oxidase subunit
           III - Algoriphagus sp. PR1
          Length = 258

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 306 YGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGF-EAAA*Y*HFVDVV*LF 482
           +   FF  TGFHG HV IG   L +C+ +     + +  H+   E    Y HFVD+V +F
Sbjct: 191 FAQLFFFITGFHGFHVTIGVFLLFLCFYQAAVGIYDQRGHYEMVEKIGLYWHFVDLVWVF 250

Query: 483 LYISIY 500
           ++   Y
Sbjct: 251 VFTLFY 256


>UniRef50_Q8L310 Cluster: Cytochrome bo subunit C; n=1; Vitreoscilla
           sp. C1|Rep: Cytochrome bo subunit C - Vitreoscilla sp.
           (strain C1)
          Length = 210

 Score = 50.0 bits (114), Expect = 3e-05
 Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFTI 293
           + TI+L+ S  T   AH +  + N ++ +  L  T +LG  F  ++ YE+   I A  T 
Sbjct: 75  VETIVLLASSFTFGMAHFAQAQKNVAKLQFWLIATFVLGAIFIGMEVYEFSHLIHAGHTP 134

Query: 294 ADRIYGSTFFIATGFHGIHVIIGTLFLLICYIR----HLNNHFSKNHHFGFEAAA*Y*HF 461
               + +++F   G HG+HV  G ++L +  ++     L+N  + N      +   + HF
Sbjct: 135 QSSAFLTSYFSLVGTHGLHVTSGLIWLAVLIVQVGKFGLDNP-AVNRRLMMLSI--FWHF 191

Query: 462 VDVV*LFLYISIY 500
           +D+V + +Y  +Y
Sbjct: 192 LDIVWVCVYTEVY 204


>UniRef50_A4YP22 Cluster: NorE protein involved in nitric oxide
           reduction; n=5; Bradyrhizobiaceae|Rep: NorE protein
           involved in nitric oxide reduction - Bradyrhizobium sp.
           (strain ORS278)
          Length = 192

 Score = 50.0 bits (114), Expect = 3e-05
 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFTI 293
           LNTI+L+ SG     A  ++   +    +  + L ++LG  F  ++  EY   I A   +
Sbjct: 69  LNTIVLVTSGWAAARAAAAVRSESSRAARCWIALAMMLGVAFISIKLTEYGNEIAAGAGL 128

Query: 294 ADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV 473
              ++ + +F+ TGFH +HV++G + L +   R  ++        G E  A + H +D+V
Sbjct: 129 ESSVFFTLYFLLTGFHLLHVLLGIVILAVVSHRATSS--------GVETGAAFWHMIDLV 180

Query: 474 *LFLYISIY 500
            + ++  +Y
Sbjct: 181 WIVMFPVLY 189


>UniRef50_Q37355 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Trypanoplasma borreli|Rep: Cytochrome c oxidase subunit
           3 - Trypanoplasma borreli
          Length = 286

 Score = 50.0 bits (114), Expect = 3e-05
 Identities = 37/134 (27%), Positives = 60/134 (44%)
 Frame = +3

Query: 99  FNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIE 278
           F+ F I +LNT+ L  SG+       S++   +  +K  L  +I LG  F   Q +E+  
Sbjct: 146 FDFFNI-ILNTVYLFISGLCCNNVLSSILCREYLLSKIILGSSIFLGLLFIWNQVWEFNI 204

Query: 279 ASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*H 458
              T++  I+ +  F     H +HV++G +F++I      +                Y H
Sbjct: 205 LIITLSVNIFCTILFSIDTLHFMHVLVGIVFMIISIFNIQSKKIGDIRIVLIVCIIFYWH 264

Query: 459 FVDVV*LFLYISIY 500
           FVD+V  FL   IY
Sbjct: 265 FVDIVWFFLLRFIY 278


>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
            Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III -
            Aeropyrum pernix
          Length = 815

 Score = 50.0 bits (114), Expect = 3e-05
 Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
 Frame = +3

Query: 21   F*AFFHRRLSPNIE-IGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNF 197
            F A+F  R +P  + +    PP  +   +   + L+NTIIL    +  T A+  +  +N+
Sbjct: 651  FSAYFFIRFNPVGKFLTEAWPPGYLV--HDVNVGLINTIILFTGTMLFTLAYLGVKRDNY 708

Query: 198  SQTKQRLFLTILLGFYFTILQAYEYIE---ASFTIADRIYGSTFFIATGFHGIHVIIGTL 368
              T   L  T+ +  YF  ++ +E+ E   A   +   +Y   +++ TG H +HVI+G L
Sbjct: 709  LITLSGLLGTLFMAIYFLTVKYFEWKELLIAGLGLDAGMYMQAYYVTTGAHALHVILGVL 768

Query: 369  FLLICYIRHLNNH 407
                  ++  N +
Sbjct: 769  ATTYLLVKLFNGN 781


>UniRef50_Q62BW6 Cluster: Cytochrome c oxidase, subunit III family
           protein; n=13; Burkholderia|Rep: Cytochrome c oxidase,
           subunit III family protein - Burkholderia mallei
           (Pseudomonas mallei)
          Length = 209

 Score = 49.6 bits (113), Expect = 4e-05
 Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIAD 299
           L+NT+ L+ S   V            +  K+R  +   LG  F  ++  EY +     A+
Sbjct: 78  LVNTLALLTSSAFVALGLGEAKAARLAAAKRRFVVAAALGALFVAIKCAEYAQKIAAGAN 137

Query: 300 RIYGSTF---FIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGF-EAAA*Y*HFVD 467
            +    +   F+ TG H +HV +G L  L   IR      ++    GF E AA Y H VD
Sbjct: 138 PLVNDFYMYYFVFTGVHLLHVAVG-LIALALMIRRCVRPAAEPRDVGFLEGAAVYWHMVD 196

Query: 468 VV*LFLYISIY 500
           V+ + L++ IY
Sbjct: 197 VLWVVLFLLIY 207


>UniRef50_A7HEB8 Cluster: Cytochrome c oxidase subunit III; n=1;
           Anaeromyxobacter sp. Fw109-5|Rep: Cytochrome c oxidase
           subunit III - Anaeromyxobacter sp. Fw109-5
          Length = 205

 Score = 49.6 bits (113), Expect = 4e-05
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYI--------E 278
           L T +L+ + +T   A  +  E         L +T   G  F   Q +E+         E
Sbjct: 72  LLTFLLVATSLTNVLAWAAAAEGRRRAAAALLAVTAAGGVLFLAGQYHEWFGLWGPGLTE 131

Query: 279 ASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*H 458
               +      STF++ TG+HG+HV++G +++L    R+L    +  HH   E    Y  
Sbjct: 132 EGLVLGRSARASTFYVITGYHGLHVLVGVVYILAVLARYLRG-LATAHH--VELLGLYWC 188

Query: 459 FVDVV*LFLYISIY 500
           FVD V +F++  +Y
Sbjct: 189 FVDFVWIFVFSFVY 202


>UniRef50_Q6LKB9 Cluster: Hypothetical cytochrome c oxidase subunit
           III; n=2; Photobacterium profundum|Rep: Hypothetical
           cytochrome c oxidase subunit III - Photobacterium
           profundum (Photobacterium sp. (strain SS9))
          Length = 208

 Score = 49.2 bits (112), Expect = 6e-05
 Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
 Frame = +3

Query: 96  PFN-PFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTIL--LGFYFTILQAY 266
           P N P+Q+ L   ++L+           + +  +    +  L + +L  LGF FT L A+
Sbjct: 69  PLNEPWQLSLSTAMLLMSCVAMANCRRKAALLPSVVACRSILIVAVLFTLGFVFTQLWAW 128

Query: 267 EY-IEASFTIADRIYGSTFFIATGFHGIHVI--IGTLFLLICYIR--HLNNHFSKNHHFG 431
           +Y ++ + T+ +    S F++ TG HG+HV+  +  LFL+I   R  H N+ +   H   
Sbjct: 129 QYLVDQNITVDNNPANSFFYLLTGLHGLHVLGGLAALFLVIYNARKGHANSLYQSLH--- 185

Query: 432 FEAAA*Y*HFVDVV*LFL 485
                 Y HF+ ++ LFL
Sbjct: 186 --LCTRYWHFLLLIWLFL 201


>UniRef50_P34958 Cluster: Quinol oxidase subunit 3 (EC 1.10.3.-)
           (Quinol oxidase polypeptide III) (Quinol oxidase
           aa3-600, subunit qoxC) (Oxidase aa(3)-600 subunit 3);
           n=52; Bacillales|Rep: Quinol oxidase subunit 3 (EC
           1.10.3.-) (Quinol oxidase polypeptide III) (Quinol
           oxidase aa3-600, subunit qoxC) (Oxidase aa(3)-600
           subunit 3) - Bacillus subtilis
          Length = 204

 Score = 49.2 bits (112), Expect = 6e-05
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 5/142 (3%)
 Frame = +3

Query: 90  ITPFNPFQIPL--LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFT---I 254
           + P   F++ L  + T +L+ S  T   A H +   +         +T+LLG  F    I
Sbjct: 56  VLPDELFEVNLVMIMTFLLLISSFTCGIAVHEMRRGSLKGVVIWTIITLLLGAGFVGCEI 115

Query: 255 LQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGF 434
            +   Y+     ++   + S FF+  G HG HV IG  ++    I+      +       
Sbjct: 116 NEFVHYVHEGAALSTSAFWSGFFVLLGTHGTHVTIGIFWITGILIQLKKRGLTPQTSSKI 175

Query: 435 EAAA*Y*HFVDVV*LFLYISIY 500
             ++ Y HF+DVV +F++  +Y
Sbjct: 176 FISSLYWHFLDVVWIFIFTGVY 197


>UniRef50_A4T660 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Mycobacterium gilvum PYR-GCK|Rep: Cytochrome c oxidase,
           subunit III - Mycobacterium gilvum PYR-GCK
          Length = 197

 Score = 48.8 bits (111), Expect = 8e-05
 Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
 Frame = +3

Query: 114 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEAS 284
           I +LNT+IL+ S   V  +  +       Q  + ++   L G  F   ++YE+   I A 
Sbjct: 66  IGVLNTVILLTSSWFVARSVLATRAGRHDQAVRLIWAGGLCGVLFIAFKSYEWTQKIAAG 125

Query: 285 FTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFV 464
            T ++  Y S +++ TG H +HV++G L +L   +R L N   +      E+ A Y H V
Sbjct: 126 HTNSEMFY-SFYYVLTGVHLVHVLLG-LIVLGVLVRELRNPGRRRASL-VESGAVYWHMV 182

Query: 465 DVV*LFLYISIY 500
           D++ + ++  +Y
Sbjct: 183 DLLWVVIFALLY 194


>UniRef50_Q1H1C2 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Methylobacillus flagellatus KT|Rep: Cytochrome c
           oxidase, subunit III - Methylobacillus flagellatus
           (strain KT / ATCC 51484 / DSM 6875)
          Length = 203

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 1/142 (0%)
 Frame = +3

Query: 78  PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 257
           PP+  +P     +P L+T++L+ S V V     +    +         ++I L   F  +
Sbjct: 56  PPAGTSP-PELLLPTLSTVVLLVSMVPVYLTDKAFKRGDPKPLAWMPLISIALALVFLGI 114

Query: 258 QAYEYIE-ASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGF 434
           +AYEY     F      YGS  ++  GFH  HVI      L+        +F+       
Sbjct: 115 KAYEYASHVDFRWDTHAYGSVVWLMIGFHSAHVIAVIFKTLVIVYLARRRYFTPEKRIAV 174

Query: 435 EAAA*Y*HFVDVV*LFLYISIY 500
                Y +FV    + LY++IY
Sbjct: 175 TVNGLYWYFVAAAWIPLYMTIY 196


>UniRef50_A6EM80 Cluster: Cytochrome c oxidase, subunit III; n=1;
           unidentified eubacterium SCB49|Rep: Cytochrome c
           oxidase, subunit III - unidentified eubacterium SCB49
          Length = 205

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
 Frame = +3

Query: 135 ILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQ--AYEYIEAS---FTIAD 299
           +++ S +T+  A  ++ +         L  T LLG  F   Q   +  I AS   FT ++
Sbjct: 75  LILASSLTMILAKSAVKKEKNGLGMALLVTTFLLGIGFIYFQFIGFNEIIASGHYFTGSE 134

Query: 300 RIYGSTF-FIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV* 476
               ++F ++    H  H+I G + LL+    H    ++K    G E AA + HFVD++ 
Sbjct: 135 STITTSFIYLVVLMHLAHIIAGLIALLVVIYNHSRQRYTKGKTLGIELAATFWHFVDILW 194

Query: 477 LFLYISIY 500
           ++L+   Y
Sbjct: 195 IYLFFFFY 202


>UniRef50_A2TZH2 Cluster: Probable cytochrome-c oxidase
           transmembrane protein; n=3; Flavobacteriaceae|Rep:
           Probable cytochrome-c oxidase transmembrane protein -
           Polaribacter dokdonensis MED152
          Length = 202

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAY------EYIEAS 284
           ++T +++ S +T+  +   L ++    +   L LT+ LG  F I Q Y      + +   
Sbjct: 68  ISTGLIVLSSITLFLSQSFLKKDKRQMSLIFLVLTLALGLGF-IWQQYVGFNQLKSVGLF 126

Query: 285 FTIADRIYGSTFFIATGF-HGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HF 461
           FT  +    ++F I   F H +H+  G + L +    H    +  N   GFE  A + HF
Sbjct: 127 FTGPESTVSTSFIIGITFMHILHIFAGVIVLFVVIYNHFKYKYKPNDLLGFELGAIFWHF 186

Query: 462 VDVV*LFLYISIY 500
           VD++ ++L+   Y
Sbjct: 187 VDLLWIYLFFFFY 199


>UniRef50_Q1IMA5 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Acidobacteria bacterium Ellin345|Rep: Cytochrome c
           oxidase, subunit III - Acidobacteria bacterium (strain
           Ellin345)
          Length = 229

 Score = 48.0 bits (109), Expect = 1e-04
 Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 23/149 (15%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIE-------- 278
           +NT +LI S +T+  A HS      +     L LT++LG  F  ++A EY +        
Sbjct: 73  INTAVLIFSSLTMAMAVHSAQVGKRNLIILFLILTLVLGCVFLGIKAVEYHDHWENHELP 132

Query: 279 -ASFTIADR--------------IYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFS 413
              F+  D+              +Y + +F  TG H  H+IIG   L+   +      F+
Sbjct: 133 GKYFSGLDKNGVDKGWHDVPHTSLYFALYFAMTGMHATHMIIGAGLLIWLIVAAYKGKFN 192

Query: 414 KNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           +N+    E    Y HFVD+V ++L+  +Y
Sbjct: 193 ENYFSPVENVGLYWHFVDIVWIYLFPLLY 221


>UniRef50_A7J1K6 Cluster: Cytochrome c oxidase subunit III; n=5;
           Schistosomatidae|Rep: Cytochrome c oxidase subunit III -
           Trichobilharzia regenti
          Length = 216

 Score = 48.0 bits (109), Expect = 1e-04
 Identities = 33/129 (25%), Positives = 63/129 (48%)
 Frame = +3

Query: 114 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFTI 293
           IPL+ T++L+ S   ++ A+H L+ +  ++    L++T+     F  L  YE + +  + 
Sbjct: 92  IPLVETVLLVGSSFFIS-AYHCLVSS--ARGVLYLYITLFSALLFMFLAIYEILGSVTSS 148

Query: 294 ADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV 473
               + +  F+  G H  HV+IG++ L+         +  +N     +    Y HFVD V
Sbjct: 149 LFNPHAACCFMTVGLHFSHVLIGSVLLVQLLYFSSFRYVRRNS----DMYIIYWHFVDYV 204

Query: 474 *LFLYISIY 500
            LF++  +Y
Sbjct: 205 WLFVFSIVY 213


>UniRef50_Q02BQ7 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Solibacter usitatus Ellin6076|Rep: Cytochrome c oxidase,
           subunit III - Solibacter usitatus (strain Ellin6076)
          Length = 224

 Score = 47.6 bits (108), Expect = 2e-04
 Identities = 21/67 (31%), Positives = 38/67 (56%)
 Frame = +3

Query: 300 RIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*L 479
           +++ S +F  TG H +H++IG   LL   ++     +S  ++   + A  Y HFVDV+ +
Sbjct: 150 QLFFSLYFAMTGLHALHMVIGVGILLTLIMQARKGIYSAEYYTPVDVAGLYWHFVDVIWI 209

Query: 480 FLYISIY 500
           FL+  +Y
Sbjct: 210 FLFPLLY 216


>UniRef50_A1T3A7 Cluster: Cytochrome c oxidase, subunit III; n=3;
           Mycobacterium|Rep: Cytochrome c oxidase, subunit III -
           Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1)
          Length = 203

 Score = 47.6 bits (108), Expect = 2e-04
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
 Frame = +3

Query: 114 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIE---AS 284
           I  +NT++L+ S + V     +      +   +   + +  G  F +L+ +EY+    A 
Sbjct: 71  IGAVNTVMLLTSSLFVALGTSAARSGKVADAVRLFVIALGFGAAFPLLKLFEYVPEVTAG 130

Query: 285 FTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGF-EAAA*Y*HF 461
            T     +   +++ TG H  HV++G L +L   +R L    S N    F E  A Y H 
Sbjct: 131 LTPGTNAFFMFYYVMTGLHLCHVLLG-LVVLGFVVREL--RISPNPRISFVETGATYWHM 187

Query: 462 VDVV*LFLYISIY 500
           VDV+ L L+   Y
Sbjct: 188 VDVLWLILFALFY 200


>UniRef50_Q45236 Cluster: Cytochrome-c oxidase; n=25; Bacteria|Rep:
           Cytochrome-c oxidase - Bradyrhizobium japonicum
          Length = 240

 Score = 47.2 bits (107), Expect = 2e-04
 Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
 Frame = +3

Query: 105 PFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEAS 284
           P  +  + T ILI S  T+  A +     +  +T   +  T   G  F  +QA+E+ +  
Sbjct: 89  PLILIAIMTFILISSSGTMAMAVNFGYRRDRVRTAILMLATAAFGATFVSMQAFEWTKLI 148

Query: 285 FT--------IADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFS--------- 413
                          +GS+FF+ TGFHG HV IG +FL+    +     F          
Sbjct: 149 MEGVRPWGNPWGAAQFGSSFFMITGFHGTHVTIGVIFLIAIARKVWRGDFDVERRGFFTS 208

Query: 414 -KNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
            K ++   E    Y HFVD+V +F++   Y
Sbjct: 209 RKGYYEIVEITGLYWHFVDLVWVFIFAFFY 238


>UniRef50_A1W9J3 Cluster: Cytochrome c oxidase, subunit III; n=69;
           Proteobacteria|Rep: Cytochrome c oxidase, subunit III -
           Acidovorax sp. (strain JS42)
          Length = 211

 Score = 47.2 bits (107), Expect = 2e-04
 Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFTI 293
           +NT  L+ S +T   A       N   T   L +T LLG  F  ++ YE+   I    T 
Sbjct: 78  INTAFLLTSSITFGFAMLQKQAGNVRGTLTWLAVTGLLGLAFLGVELYEFAHMIHLGATP 137

Query: 294 ADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV 473
               + S+FF   G HG+HV  G ++L+   ++   +     +       + + HF+DVV
Sbjct: 138 QRSAFLSSFFTLVGTHGLHVTFGLIWLVTLMLQISKHGLIHENKRRLNCLSMFWHFLDVV 197

Query: 474 *LFLYISIY 500
            + ++  +Y
Sbjct: 198 WIGVFTFVY 206


>UniRef50_Q9I425 Cluster: Cytochrome o ubiquinol oxidase subunit 3;
           n=76; Proteobacteria|Rep: Cytochrome o ubiquinol oxidase
           subunit 3 - Pseudomonas aeruginosa
          Length = 209

 Score = 47.2 bits (107), Expect = 2e-04
 Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
 Frame = +3

Query: 108 FQIP--LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY--- 272
           F++P  L+ T IL+ S  T   A  S  +    Q    L +T LLG  F  ++  E+   
Sbjct: 69  FELPYVLVETAILLVSSCTYGLAMLSAHKGAKGQAIAWLGVTFLLGAAFIGMEINEFHHL 128

Query: 273 IEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y 452
           I   F  +   + S+FF   G HG+HV  G L++L+   +      +  ++      + +
Sbjct: 129 IAEGFGPSRSAFLSSFFTLVGMHGLHVSAGLLWMLVLMAQIWTRGLTAQNNTRMMCLSLF 188

Query: 453 *HFVDVV*LFLYISIY 500
            HF+D+V + ++  +Y
Sbjct: 189 WHFLDIVWICVFTVVY 204


>UniRef50_Q89AA5 Cluster: Cytochrome o ubiquinol oxidase subunit 3;
           n=1; Buchnera aphidicola (Baizongia pistaciae)|Rep:
           Cytochrome o ubiquinol oxidase subunit 3 - Buchnera
           aphidicola subsp. Baizongia pistaciae
          Length = 194

 Score = 47.2 bits (107), Expect = 2e-04
 Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFT 290
           ++ T +L+ S  +       +   N       L +T LLG  F  L+ +E+   I   F 
Sbjct: 60  IIETFLLLFSSFSCNLVLFEMKNKNLYMVFLWLGITFLLGLLFVFLELFEFFHLINLGFG 119

Query: 291 IADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDV 470
                + S+FF+    HGIHVI G +++++        + +   ++       + HF+D+
Sbjct: 120 PTRSGFLSSFFVLIATHGIHVISGLIWIIVMIKYVYTFNITNLIYYRMLCLNLFWHFLDI 179

Query: 471 V*LFLYISIY 500
           V +F++  +Y
Sbjct: 180 VWVFIFSFVY 189


>UniRef50_Q5P8Y3 Cluster: Putative additional subunit of nitric
           oxide reductase (Nor) complex, membrane protein; n=3;
           Betaproteobacteria|Rep: Putative additional subunit of
           nitric oxide reductase (Nor) complex, membrane protein -
           Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
           (strain EbN1))
          Length = 198

 Score = 46.8 bits (106), Expect = 3e-04
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQR-LFLTILLGFYFTILQAYEY---IEASFT 290
           +NT++L+ S   V  A   + E  FS+     L      G  F +++ +EY   I A  +
Sbjct: 67  INTVLLLTSSFFVVRAVQ-VAEAGFSRRAAPWLAAAFACGAGFVVVKIFEYADKIGAGIS 125

Query: 291 IADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDV 470
           ++   +   +   T FH +HVI+G + +   +       +  ++  G E  A Y H VD+
Sbjct: 126 LSSSTFYMFYLSLTFFHFMHVILGMVIIAAMWNGARTGRYGPDNMNGIETGAAYWHMVDL 185

Query: 471 V*LFLYISIY 500
           V L L+  IY
Sbjct: 186 VWLILFPLIY 195


>UniRef50_Q26HL4 Cluster: Cytochrome oxidase subunit III; n=13;
           Bacteroidetes|Rep: Cytochrome oxidase subunit III -
           Flavobacteria bacterium BBFL7
          Length = 332

 Score = 46.8 bits (106), Expect = 3e-04
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +3

Query: 303 IYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGF-EAAA*Y*HFVDVV*L 479
           ++   FF  TGFHG HV  G +F LI +   L   + +   +   E    Y HFVD+V +
Sbjct: 264 LFADFFFFITGFHGFHVFSGVVFNLIIFFNVLLGTYERRGSYEMVEKVGLYWHFVDLVWV 323

Query: 480 FLYISIY 500
           F++   Y
Sbjct: 324 FVFTFFY 330


>UniRef50_A1ZL91 Cluster: Cytochrome c oxidase subunit III,
           putative; n=1; Microscilla marina ATCC 23134|Rep:
           Cytochrome c oxidase subunit III, putative - Microscilla
           marina ATCC 23134
          Length = 204

 Score = 46.8 bits (106), Expect = 3e-04
 Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAY---EYIEASFTI 293
           L+T  +I S +T+   + ++ +  F + K  L  T+ LG  F  LQ     + I     +
Sbjct: 65  LSTFSIITSSLTLWQTNQAVKKEQFRRAKILLGTTLGLGLLFIGLQVVGWQQLIAQKVYL 124

Query: 294 ADRIYGSTFFIATGFHGIHVIIGTLFLLICYI---RHLN------NHFSKNHHFGFEAAA 446
           ++ + GS  +I +G H  H++ G LFL + +I   RH +      +  +  +    +   
Sbjct: 125 SNSLGGSFIYIISGLHIAHILGGILFLTLIFIDIARHTSYVDSFIHSINPPNQLRLKLVT 184

Query: 447 *Y*HFVDVV*LFLYI 491
            Y HFVDV+ L+L++
Sbjct: 185 IYWHFVDVLWLYLFL 199


>UniRef50_Q2IK65 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Anaeromyxobacter dehalogenans 2CP-C|Rep: Cytochrome c
           oxidase, subunit III - Anaeromyxobacter dehalogenans
           (strain 2CP-C)
          Length = 235

 Score = 46.4 bits (105), Expect = 4e-04
 Identities = 21/63 (33%), Positives = 35/63 (55%)
 Frame = +3

Query: 312 STFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYI 491
           S +++ TG HGIHV++G    +   +R     F   ++   +A A Y H VD+V +FL+ 
Sbjct: 171 SLYYLMTGLHGIHVLVGIGLYVWLIVRARRGDFGPGYYGPVDAVALYWHLVDLVWIFLFP 230

Query: 492 SIY 500
            +Y
Sbjct: 231 LLY 233


>UniRef50_A1ZL81 Cluster: CytoChrome c oxidase polypeptide III
           (Cytochrome aa3subunit 3) (Oxidase aa(3) subunit 3);
           n=3; Sphingobacteriales|Rep: CytoChrome c oxidase
           polypeptide III (Cytochrome aa3subunit 3) (Oxidase aa(3)
           subunit 3) - Microscilla marina ATCC 23134
          Length = 284

 Score = 46.4 bits (105), Expect = 4e-04
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +3

Query: 306 YGSTFFIATGFHGIHVIIGTLF-LLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LF 482
           + + FF  TGFHG HV+ G +  ++I Y   +  +  KN +   E    Y HFVD+V +F
Sbjct: 217 FANLFFFITGFHGTHVLSGVIINIIIFYNTVMGIYARKNDYEMVEKVGLYWHFVDLVWVF 276

Query: 483 LYISIY 500
           ++   Y
Sbjct: 277 VFTFFY 282


>UniRef50_Q6F9R3 Cluster: Cytochrome o ubiquinol oxidase subunit
           III; n=23; Proteobacteria|Rep: Cytochrome o ubiquinol
           oxidase subunit III - Acinetobacter sp. (strain ADP1)
          Length = 206

 Score = 46.0 bits (104), Expect = 5e-04
 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFT 290
           L  T  L+ S VT   A  +  + N +Q    LF+T + G  F  ++ YE+   + +   
Sbjct: 72  LTETFALLISSVTFGFAVLASYKKNVNQVIMWLFITFVFGATFIGMELYEFHHLVHSGHG 131

Query: 291 IADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDV 470
                + S FF   G HGIHV  G +++L+   +      +          + + HF+D+
Sbjct: 132 PGTSAFLSAFFTLVGTHGIHVTSGLVWMLVLIYQIKTKGLTLPTTRRLACLSLFWHFLDI 191

Query: 471 V*LFLYISIY 500
           V + ++  +Y
Sbjct: 192 VWICVFSVVY 201


>UniRef50_Q3JBP9 Cluster: Cytochrome/quinol oxidase subunit 3; n=1;
           Nitrosococcus oceani ATCC 19707|Rep: Cytochrome/quinol
           oxidase subunit 3 - Nitrosococcus oceani (strain ATCC
           19707 / NCIMB 11848)
          Length = 214

 Score = 45.6 bits (103), Expect = 7e-04
 Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 15/141 (10%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEA------- 281
           ++T +L+ SG T+  A  S            L LTILL   F  ++  EY +A       
Sbjct: 69  ISTGVLLTSGFTMALAVRSAKLGRDKAIIGFLVLTILLAIAFLFIEGTEYYQAYGEQLIP 128

Query: 282 --SFTIAD------RIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFE 437
             +F           ++   +F+ TG H +HV IG L +    I      F+  ++   E
Sbjct: 129 AFNFMYEGAHEKPVELFFFLYFLMTGMHAVHVTIGILIMAAIAIMAGRRRFTSYYYTPVE 188

Query: 438 AAA*Y*HFVDVV*LFLYISIY 500
               Y  FVD+V +FLY   Y
Sbjct: 189 LTGLYWAFVDIVWIFLYPLFY 209


>UniRef50_A7CY74 Cluster: Putative uncharacterized protein; n=1;
           Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
           protein - Opitutaceae bacterium TAV2
          Length = 154

 Score = 45.6 bits (103), Expect = 7e-04
 Identities = 17/35 (48%), Positives = 27/35 (77%)
 Frame = +3

Query: 288 TIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIR 392
           T+++ I+GSTF+  TG HG HV IG ++L++ Y+R
Sbjct: 2   TLSNAIFGSTFYTLTGTHGCHVAIGVVWLVLMYVR 36


>UniRef50_A6H1E6 Cluster: Cytochrome c oxidase family protein; n=1;
           Flavobacterium psychrophilum JIP02/86|Rep: Cytochrome c
           oxidase family protein - Flavobacterium psychrophilum
           (strain JIP02/86 / ATCC 49511)
          Length = 335

 Score = 45.6 bits (103), Expect = 7e-04
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +3

Query: 300 RIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGF-EAAA*Y*HFVDVV* 476
           +++   FF  TGFHG HV+ G +  ++ +   L   + K   +   E    Y HFVD+V 
Sbjct: 266 KLFADFFFFITGFHGFHVLSGVIINVLIFFNVLLGTYDKRKTYEMVEKVGLYWHFVDLVW 325

Query: 477 LFLYISIY 500
           +F++   Y
Sbjct: 326 VFVFTFFY 333


>UniRef50_A1UJP9 Cluster: Cytochrome c oxidase, subunit III; n=5;
           Mycobacterium|Rep: Cytochrome c oxidase, subunit III -
           Mycobacterium sp. (strain KMS)
          Length = 198

 Score = 45.6 bits (103), Expect = 7e-04
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
 Frame = +3

Query: 111 QIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEA--- 281
           +I + NTI L+ S   +     +     +       FLTIL G  F + +  E+++    
Sbjct: 65  RIGVFNTIALLLSSWAIARCVQASRAGAYRSALTNAFLTILFGLAFLVAKVIEWVKEIGI 124

Query: 282 --SFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y* 455
             +FT +D  +   FF+ T  H IHV+IG + L +  +  L +   ++     E  A Y 
Sbjct: 125 GNTFT-SDEFFQHYFFL-TSIHCIHVLIGFVVLGV-VVYQLRSPLRRSQQL-VETCATYW 180

Query: 456 HFVDVV*LFLYISIY 500
           H VD + + ++ S+Y
Sbjct: 181 HTVDFLWVLIFASLY 195


>UniRef50_Q34135 Cluster: Cytochrome c oxidase subunit 3; n=9;
           Calyptogena|Rep: Cytochrome c oxidase subunit 3 -
           Calyptogena laubieri
          Length = 88

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 16/81 (19%)
 Frame = +3

Query: 105 PFQIPLLNTIILIRSGVTVT*AH-----HSLIENNFSQTKQR-----------LFLTILL 236
           P+ +P LNT++L+ SG+  T AH     HS I     Q+              L +TI+L
Sbjct: 8   PWGVPFLNTVVLVSSGLWATTAHKAVKVHSSIGLGSPQSVALSVKWWKLGLLCLGITIVL 67

Query: 237 GFYFTILQAYEYIEASFTIAD 299
           G YFT LQ +EY  +SF+++D
Sbjct: 68  GVYFTYLQIHEYYSSSFSMSD 88


>UniRef50_A3QRI5 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Microcotyle sebastis|Rep: Cytochrome c oxidase subunit 3
           - Microcotyle sebastis
          Length = 251

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
 Frame = +3

Query: 216 LFLTILLGFYFTILQAYEYIEASFTIADRI-YGSTFFIATGFHGIHVIIGTLFLLICYI- 389
           L LTIL G  F  LQ  E+     ++ +   YGS   + T F G+HV+IG +FL   Y+ 
Sbjct: 148 LLLTILNGLGFLFLQYSEFSSCPPSVINSSWYGSCLILVT-FRGLHVVIGLVFLCYNYVL 206

Query: 390 RHLNNHFSK-----NHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
             +NN  +      +H+        Y HFVD +   +Y  +Y
Sbjct: 207 LFINNSNTSVEVFIDHYRLVYFTCFYWHFVDFIWFIVYFIVY 248


>UniRef50_A4U0D0 Cluster: Cytochrome c oxidase subunit III; n=3;
           Proteobacteria|Rep: Cytochrome c oxidase subunit III -
           Magnetospirillum gryphiswaldense
          Length = 196

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEAS---FTI 293
           LNT++L+ SG     A            +  L     LG  F +++  EY   +     I
Sbjct: 73  LNTLVLVTSGWLAAKAVQRQSAGAGFAARSYLAGAGALGLVFLLIKGVEYAAKAAQGIDI 132

Query: 294 ADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV 473
               + + F++ TGFH +HVI+G + L I           KN     E  A + H VD++
Sbjct: 133 ETNTFFTLFYLMTGFHAMHVIMGVIVLAIV--------GWKNSSDNLETGAAFWHMVDLI 184

Query: 474 *LFLYISIY 500
            L L+  +Y
Sbjct: 185 WLILFPIVY 193


>UniRef50_Q12MR6 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Shewanella denitrificans OS217|Rep: Cytochrome c
           oxidase, subunit III - Shewanella denitrificans (strain
           OS217 / ATCC BAA-1090 / DSM 15013)
          Length = 243

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFT 290
           L NT+IL+ S   +  A  ++       T   L LTI  G  +  ++ +E+    +    
Sbjct: 111 LANTLILLTSSFCMVNAMRAIKAGRAGVTLNWLLLTIAAGGLYCAVKYWEFGRNQDLGIH 170

Query: 291 IADRIYGSTFFIATGFHGIHVIIGTLFL-LICYIRHLNNHFSKNHHFGFEAAA*Y*HFVD 467
             D  + + ++     H +HV+IG   +  +  +  L  +  KNH  G E+AA Y H +D
Sbjct: 171 PRDDYFIAAYYYIGFNHLLHVLIGMASIGFVAMLTALGFYDGKNHE-GLESAATYWHMID 229

Query: 468 VV*LFLYISIY 500
           +V + ++  +Y
Sbjct: 230 LVWIIIFPLLY 240


>UniRef50_A3HUQ8 Cluster: Probable cytochrome-c oxidase
           transmembrane protein; n=1; Algoriphagus sp. PR1|Rep:
           Probable cytochrome-c oxidase transmembrane protein -
           Algoriphagus sp. PR1
          Length = 204

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEAS---FT 290
           +++T+++I SG T T   +   E N  + +  L  T+LLG  FT+ Q   ++E +     
Sbjct: 62  VVSTVLIILSGYTATKMRYYYQEENTLKLQAALRNTLLLGLAFTLFQLVGWLELTNMGVN 121

Query: 291 IADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNH 407
                 GS  ++ +G H  H ++G +   I  +R +  H
Sbjct: 122 FTGIPSGSFLYVLSGIHIFH-LLGAMIFAIILLRQIRKH 159


>UniRef50_Q46SU6 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Ralstonia eutropha JMP134|Rep: Cytochrome c oxidase,
           subunit III - Ralstonia eutropha (strain JMP134)
           (Alcaligenes eutrophus)
          Length = 209

 Score = 43.6 bits (98), Expect = 0.003
 Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFTI 293
           LNT++L+ S + +  A  +  E+      + L+ T  LG  F +++ +EY   I + F  
Sbjct: 65  LNTLVLMTSSLGMAMAVSAANEDRRRAAVRCLWATSALGLVFLLIKGWEYAKDIASGFVP 124

Query: 294 AD---------RIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA 446
            +         +++   +F  TG H IH+ IG   +++  +               E   
Sbjct: 125 GNASGAGGPTGQMFRLLYFAMTGLHAIHLCIGIGLVVVFALAMRQRRPLAVDPGRLEIVG 184

Query: 447 *Y*HFVDVV*LFLYISIY 500
            Y HFVD++ LFL+  +Y
Sbjct: 185 LYWHFVDIIWLFLFALLY 202


>UniRef50_Q32YM4 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Pseudopfiesteria shumwayae|Rep: Cytochrome c oxidase
           subunit 3 - Pseudopfiesteria shumwayae
          Length = 136

 Score = 43.6 bits (98), Expect = 0.003
 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
 Frame = +3

Query: 78  PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSL-IENNFSQTKQRLFLTILLGFYFTI 254
           PP      +P ++   NT++L  + +++     SL I + F         + +  + F  
Sbjct: 1   PPEGFYLPDPCELTFANTLLLSNAAISLGNTFISLEISSQFFIFFSSF--SFIQAWTFIS 58

Query: 255 LQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHF 410
           LQ  E++   F+I D +Y   FF  TG H  H+++G   LL+C +   N  F
Sbjct: 59  LQIKEFLIMGFSINDSVYSCLFFFLTGLHFFHLLLG---LLLCCLFFCNCSF 107


>UniRef50_Q6MBY4 Cluster: Probable cytochrome o ubiquinol oxidase
           chain III cyoC; n=1; Candidatus Protochlamydia
           amoebophila UWE25|Rep: Probable cytochrome o ubiquinol
           oxidase chain III cyoC - Protochlamydia amoebophila
           (strain UWE25)
          Length = 211

 Score = 43.2 bits (97), Expect = 0.004
 Identities = 29/136 (21%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
 Frame = +3

Query: 108 FQIP--LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY--- 272
           FQ+P   + T+IL+ S +T   +  + +++        L +T  LG  F  L+  E+   
Sbjct: 71  FQLPTAFIETLILLLSSMTCGLSMLAAVKSQKKYVIGWLIITFCLGSSFLFLEIQEFSLL 130

Query: 273 IEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y 452
           I          + S+FF   G HG+H+  G L++++   + +    + +        + +
Sbjct: 131 IREGNGFDRSAFLSSFFTLVGTHGLHITFGLLWMIVMIAQVIYQGITLSTFRRLALFSLF 190

Query: 453 *HFVDVV*LFLYISIY 500
            HF+D++ + ++  +Y
Sbjct: 191 WHFLDLIWISIFTFVY 206


>UniRef50_Q2KJN9 Cluster: NirO; n=11; Pseudomonas|Rep: NirO -
           Pseudomonas stutzeri (Pseudomonas perfectomarina)
          Length = 175

 Score = 43.2 bits (97), Expect = 0.004
 Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
 Frame = +3

Query: 114 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEAS--- 284
           I L  T+ L+ SG+    A   + +    +    L   +     + +L+  EY   +   
Sbjct: 41  IGLALTLSLLTSGLFAALAVEQVRQARQGRAALLLLAALGTSCVYVVLKLNEYGHLAGLG 100

Query: 285 FTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFV 464
             +    + + ++I TGFH +HV++G + L     R     +  + H G E+   Y H V
Sbjct: 101 LGMEHNTFFTLYWILTGFHFLHVLLGMVILAWLAERCRRRAYRPDDHGGLESGVLYWHMV 160

Query: 465 DVV*LFLYISIY 500
           D+V + L+  +Y
Sbjct: 161 DLVWVLLFPLVY 172


>UniRef50_Q74GM6 Cluster: Cytochrome c oxidase, subunit III; n=4;
           Deltaproteobacteria|Rep: Cytochrome c oxidase, subunit
           III - Geobacter sulfurreducens
          Length = 200

 Score = 42.7 bits (96), Expect = 0.005
 Identities = 19/68 (27%), Positives = 34/68 (50%)
 Frame = +3

Query: 297 DRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV* 476
           + ++   +++ TG HG+HV+IG + L +   R          +   E  A Y H VD+V 
Sbjct: 130 ESVFFGLYYLTTGLHGLHVLIGGVLLTVVARRVKGGRVHAGDYIWLENGALYWHLVDLVW 189

Query: 477 LFLYISIY 500
           +F++   Y
Sbjct: 190 IFIFPLYY 197


>UniRef50_A7HEB4 Cluster: Cytochrome c oxidase subunit III; n=1;
           Anaeromyxobacter sp. Fw109-5|Rep: Cytochrome c oxidase
           subunit III - Anaeromyxobacter sp. Fw109-5
          Length = 208

 Score = 42.7 bits (96), Expect = 0.005
 Identities = 38/144 (26%), Positives = 57/144 (39%), Gaps = 3/144 (2%)
 Frame = +3

Query: 78  PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTIL 257
           PP    P  P  +P LNT+++  S   V  A  S            L   ++LG  F ++
Sbjct: 66  PPLDAPPL-PRLLPGLNTLVIAASSAAVVRATRSQELRRPRGVTAALAAAVVLGAIFLLV 124

Query: 258 QAYEYI---EASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHF 428
           Q   +          A   Y S F+  T FH +HV++G   L    +R       ++   
Sbjct: 125 QGVVWSGLWRQGLVPAGGPYPSVFYAFTAFHALHVVVGLAALAWLAVRARAG--GESLRT 182

Query: 429 GFEAAA*Y*HFVDVV*LFLYISIY 500
                  Y HFV VV   LY+++Y
Sbjct: 183 DVRLWGWYWHFVGVVWGVLYLTVY 206


>UniRef50_Q9A7F2 Cluster: Ubiquinol oxidase subunit III; n=5;
           cellular organisms|Rep: Ubiquinol oxidase subunit III -
           Caulobacter crescentus (Caulobacter vibrioides)
          Length = 208

 Score = 42.3 bits (95), Expect = 0.007
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFTI 293
           +NT +L+ S +T   A  +            L +T LLG  F  L+ YE+   I    T 
Sbjct: 74  INTGLLLLSSITYGFAMIAAQAREVRPVLIWLGVTGLLGVGFLSLEIYEFAHLIHEGATP 133

Query: 294 ADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV 473
               + S FF+  G HG+HV  G ++L+   ++                 + + HF+DV+
Sbjct: 134 QRSAFLSAFFLLVGTHGLHVTFGVIWLVTLMVQVAQRGLGIEMRRRLMCLSMFWHFLDVI 193

Query: 474 *LFLYISIY 500
            + ++  +Y
Sbjct: 194 WIGVFSFVY 202


>UniRef50_A0GZ74 Cluster: Cytochrome c oxidase, subunit III; n=2;
           Chloroflexus|Rep: Cytochrome c oxidase, subunit III -
           Chloroflexus aggregans DSM 9485
          Length = 278

 Score = 42.3 bits (95), Expect = 0.007
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +3

Query: 318 FFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISI 497
           +F ATG H IH++IG   +       L N FS  ++   E    Y H +D++ +FL+   
Sbjct: 216 YFCATGLHAIHMLIGLGVMGTITTMALRNKFSPTYYTPVEIGGLYWHLIDIIWVFLFPLF 275

Query: 498 Y 500
           Y
Sbjct: 276 Y 276



 Score = 40.3 bits (90), Expect = 0.027
 Identities = 20/52 (38%), Positives = 32/52 (61%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIE 278
           +NT++L+ S +TV  A ++  E N  +    L LT+LLG  F +++ YEY E
Sbjct: 100 VNTVVLLVSSLTVALAVNAAEEGNKRRLLTMLVLTMLLGVTFLVIKGYEYSE 151


>UniRef50_Q36098 Cluster: Cytochrome c oxidase subunit 3; n=2;
           Theileria|Rep: Cytochrome c oxidase subunit 3 -
           Theileria parva
          Length = 255

 Score = 42.3 bits (95), Expect = 0.007
 Identities = 32/122 (26%), Positives = 57/122 (46%)
 Frame = +3

Query: 135 ILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGS 314
           +L    + V+   H + E+   +T   +   +L+GF F  LQ  EY      + +     
Sbjct: 135 VLNTGSILVSIILHRVQESANFETDFFMEQLLLIGFIFLSLQNDEYSLILSYVNNYWMTL 194

Query: 315 TFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYIS 494
            FFI TG H +HV  G +F+LI    +  +   ++  F    A  Y HFV+++ + L + 
Sbjct: 195 YFFILTGLHSLHVCAGGIFVLIQSYFYEGDGSQRDEEFN---AGVYWHFVEMIWIALTML 251

Query: 495 IY 500
           ++
Sbjct: 252 LF 253


>UniRef50_A6EAK8 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Pedobacter sp. BAL39|Rep: Cytochrome c oxidase, subunit
           III - Pedobacter sp. BAL39
          Length = 196

 Score = 41.9 bits (94), Expect = 0.009
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIAD 299
           + +T+ILI S V +  A  +L   N    +  L+ T  L   F  LQ   +     T A 
Sbjct: 63  MYSTLILIGSSVCLFFASKALKSGNKGMQQLFLWATAALALTFGYLQVDAWSALFRTGAT 122

Query: 300 RIYG----STFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVD 467
            +      S  +I +G H +H++ G  F+         N  +    +  E A+ + HF+D
Sbjct: 123 LVNNNAAISLIYIVSGMHLLHILGGLGFIFSSLAGSYMNLSAARAKYRMELASIFWHFID 182

Query: 468 VV*LFLYI 491
           ++ ++LY+
Sbjct: 183 ILWIYLYV 190


>UniRef50_A7DFN3 Cluster: Cytochrome c oxidase, subunit III
           precursor; n=2; Methylobacterium extorquens PA1|Rep:
           Cytochrome c oxidase, subunit III precursor -
           Methylobacterium extorquens PA1
          Length = 274

 Score = 41.5 bits (93), Expect = 0.012
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQ-TKQRLFLTILLGFYFTILQAYEYIE------- 278
           LNT +L+ SG+T   A  +  ++   + T   L  T+LLG  F +++  EY E       
Sbjct: 130 LNTALLLTSGLTAAIAAQASEQDGLRRLTLICLGATVLLGLAFLVVKGLEYSEDIEKHLV 189

Query: 279 --ASFTI---ADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAA 443
             A F +   A +++   ++++T  H IH+ IG   +     R              E A
Sbjct: 190 PGADFALKAPATQLFFGFYWLSTSVHAIHLSIGVGLIARLIWREWRAPGFLLASPQVEVA 249

Query: 444 A*Y*HFVDVV*LFLYISIY 500
             Y  FVD+V +FLY  +Y
Sbjct: 250 TLYWGFVDMVWIFLYPMLY 268


>UniRef50_Q51666 Cluster: NorE protein; n=7; Rhodobacteraceae|Rep:
           NorE protein - Paracoccus denitrificans
          Length = 167

 Score = 41.1 bits (92), Expect = 0.015
 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFTI 293
           LNT IL+ SG     A  +    +    +  L L  L G  F  ++A EY   + A   +
Sbjct: 44  LNTAILVTSGFFAARAERACRRGDRRGARVGLALAALGGAGFLAVKAVEYAGDLRAGLGM 103

Query: 294 ADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV 473
               + + +++ TGFH  HV+ G   L +  IR              +A A + H VD+V
Sbjct: 104 ESHPFFTFYYLLTGFHAAHVLFGIGVLALVAIRLRTEE--------VQAGAAFWHMVDLV 155

Query: 474 *LFLYISIY 500
            + L   +Y
Sbjct: 156 WVLLLPPVY 164


>UniRef50_Q2JYD3 Cluster: Nitric oxide reductase protein; n=1;
           Rhizobium etli CFN 42|Rep: Nitric oxide reductase
           protein - Rhizobium etli (strain CFN 42 / ATCC 51251)
          Length = 179

 Score = 40.7 bits (91), Expect = 0.020
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY-IEASFTIA 296
           L NT+IL+ SG     A  S    +  + +  L      G  F  ++ YEY  E +  +A
Sbjct: 61  LANTVILLVSGWFAALAPRS---GSIGRQRLALLAAAAGGILFVAVKLYEYRAEGTSLLA 117

Query: 297 DRIYGSTFFIATGFHGIHVIIGTLFL 374
             ++   + + TGFH  HV+ G L L
Sbjct: 118 ADVFSQLYVLITGFHLAHVLFGALVL 143


>UniRef50_P57542 Cluster: Cytochrome o ubiquinol oxidase subunit 3;
           n=2; Buchnera aphidicola|Rep: Cytochrome o ubiquinol
           oxidase subunit 3 - Buchnera aphidicola subsp.
           Acyrthosiphon pisum (Acyrthosiphon pisumsymbiotic
           bacterium)
          Length = 205

 Score = 39.9 bits (89), Expect = 0.035
 Identities = 24/130 (18%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEA---SFT 290
           LL T +L+ S ++      ++ +         L +T + G  F +++ +E+ E    +F 
Sbjct: 71  LLETFLLLLSSLSCGFVVIAMNQKRIKMIYSFLTITFIFGLIFLLMEVHEFYELIIENFG 130

Query: 291 IADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDV 470
                + S FF     HG+H+  G + +L    +      + +        + + HF+D+
Sbjct: 131 PDKNAFFSIFFTLVATHGVHIFFGLILILSILYQIKKLGLTNSIRTRILCFSVFWHFLDI 190

Query: 471 V*LFLYISIY 500
           + + ++  +Y
Sbjct: 191 IWICVFTFVY 200


>UniRef50_Q11CH0 Cluster: Cytochrome c oxidase, subunit III
           precursor; n=3; Proteobacteria|Rep: Cytochrome c
           oxidase, subunit III precursor - Mesorhizobium sp.
           (strain BNC1)
          Length = 201

 Score = 39.5 bits (88), Expect = 0.047
 Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
 Frame = +3

Query: 129 TIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY--IEASFTIADR 302
           T+IL+ S +T   A  ++        +  L +T  LG  F +++  E+  + A+    D+
Sbjct: 69  TMILLASSITFGFATVAIGTGRRPAVQLWLLVTFALGLGFVLMELTEFRSMIAAGAGPDQ 128

Query: 303 IYG-STFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*L 479
               S FF   G HG+HV IG +++L+   +      S       E    + HF+D++ +
Sbjct: 129 SGALSAFFTLVGTHGLHVSIGLVWILVMMAQVALKGLSVPVVSRLERLGLFWHFLDIIWI 188

Query: 480 FLYISIY 500
            ++  +Y
Sbjct: 189 GIFSVVY 195


>UniRef50_A4CG88 Cluster: Cytochrome o ubiquinol oxidase subunit
           III; n=5; Flavobacteria|Rep: Cytochrome o ubiquinol
           oxidase subunit III - Robiginitalea biformata HTCC2501
          Length = 196

 Score = 39.5 bits (88), Expect = 0.047
 Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 9/140 (6%)
 Frame = +3

Query: 108 FQIPLL---NTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIE 278
           FQ+P+    +T IL+ S +T   A  S+ +         L +T++ G  F   Q   + +
Sbjct: 54  FQLPMAFWYSTGILLLSSLTYMMALRSVRQGQQRAGSLWLGITLVAGLVFIYSQFSGFSQ 113

Query: 279 AS-----FT-IADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEA 440
                  FT     I  S  F+    H  HV+ G + L++  ++ L   +      G E 
Sbjct: 114 MIGYGYYFTGPTSNITLSYLFLIAAVHIAHVVAGLISLVVVVVKQLRGKYGPGRMLGMEL 173

Query: 441 AA*Y*HFVDVV*LFLYISIY 500
            + + HF+D++ ++L +  Y
Sbjct: 174 GSTFWHFLDLLWVYLMLFFY 193


>UniRef50_Q92Z14 Cluster: NorE protein involved in nitric oxide
           reduction; n=2; Sinorhizobium|Rep: NorE protein involved
           in nitric oxide reduction - Rhizobium meliloti
           (Sinorhizobium meliloti)
          Length = 188

 Score = 39.1 bits (87), Expect = 0.062
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
 Frame = +3

Query: 126 NTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFTIA 296
           NT++L+ SG     A       + ++ ++ L L  LLGF F  ++ YEY   I  +   A
Sbjct: 69  NTLVLLTSGWQAAVAAGK--GASVARRRRALVLAALLGFAFVAIKIYEYGTEIRFAGEAA 126

Query: 297 DRIYGSTFFIATGFHGIHVIIGTLFLLI 380
              +   +F+ TGFH  HV    + LL+
Sbjct: 127 FHSFFELYFLLTGFHLAHVGFVAIVLLV 154


>UniRef50_Q48A74 Cluster: Cytochrome c oxidase subunit III family
           protein; n=4; Gammaproteobacteria|Rep: Cytochrome c
           oxidase subunit III family protein - Colwellia
           psychrerythraea (strain 34H / ATCC BAA-681)
           (Vibriopsychroerythus)
          Length = 206

 Score = 39.1 bits (87), Expect = 0.062
 Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---IEASFTI 293
           LNT  LI S   V  A  S+  ++  Q+ + L+  +  G  + +++ +EY   ++     
Sbjct: 75  LNTFALISSSYFVAKALASIRMDDPEQSIKWLWRAVSCGCIYLVIKVWEYHWNVDQGIVT 134

Query: 294 ADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV 473
               + + ++  T  H +HV   +  LL    +     ++K +H G  A A Y H VD+ 
Sbjct: 135 NTSKFYTMYYYMTFNHLLHVGWASGSLLWAIHQLKVGRYTKKNHIGLTAIACYWHMVDLA 194

Query: 474 *LFLYISIY 500
            + ++  +Y
Sbjct: 195 WVIIFPLLY 203


>UniRef50_Q1IUK5 Cluster: Cytochrome c oxidase subunit III; n=2;
           Acidobacteria|Rep: Cytochrome c oxidase subunit III -
           Acidobacteria bacterium (strain Ellin345)
          Length = 208

 Score = 38.3 bits (85), Expect = 0.11
 Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
 Frame = +3

Query: 120 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYI---EASFT 290
           ++ T +LI S +T+          +        F+T+LLG  F  L   E+I       T
Sbjct: 71  MIMTFVLITSSLTMLIGVRKAQSGDRFGAINWTFITVLLGLVFAGLHIREWIGLIHEGVT 130

Query: 291 IA-----DRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y* 455
           ++      + +G+ FF  TG H  HV  G + L +  +      +        E    Y 
Sbjct: 131 LSANPWGSKQFGALFFSITGLHLTHVFGGVIALTVVALGFKRGRYKA---ADIEIWGLYW 187

Query: 456 HFVDVV*LFLYISIY 500
           HFVD+V +F+   +Y
Sbjct: 188 HFVDLVWMFVVPLVY 202


>UniRef50_Q576W5 Cluster: Cytochrome c oxidase, subunit III; n=9;
           Proteobacteria|Rep: Cytochrome c oxidase, subunit III -
           Brucella abortus
          Length = 180

 Score = 37.9 bits (84), Expect = 0.14
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +3

Query: 207 KQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTF---FIATGFHGIHVIIGTLFLL 377
           ++ L    L GF F  ++  EY   +    +   GS F   F+ TGFH +HV+ G++ L+
Sbjct: 86  RRPLLFAALFGFCFVAVKLLEYSHEARFAGNEAAGSFFELYFLITGFHLLHVLFGSVILM 145

Query: 378 I 380
           +
Sbjct: 146 L 146


>UniRef50_A6CA08 Cluster: Cytochrome oxidase subunit III; n=1;
           Planctomyces maris DSM 8797|Rep: Cytochrome oxidase
           subunit III - Planctomyces maris DSM 8797
          Length = 360

 Score = 37.9 bits (84), Expect = 0.14
 Identities = 17/67 (25%), Positives = 34/67 (50%)
 Frame = +3

Query: 300 RIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*L 479
           R +   +F  TG H IH+I G + +    +R ++  F+  +    +    Y H VD++ +
Sbjct: 291 RTFFGVYFCMTGVHAIHIIGGMIAISWLIVRTVHGAFTTYYFGAVDFVGLYWHLVDLIWI 350

Query: 480 FLYISIY 500
           +L+  +Y
Sbjct: 351 YLFPLLY 357


>UniRef50_Q7UI89 Cluster: Cytochrome oxidase subunit III; n=1;
           Pirellula sp.|Rep: Cytochrome oxidase subunit III -
           Rhodopirellula baltica
          Length = 431

 Score = 37.5 bits (83), Expect = 0.19
 Identities = 15/66 (22%), Positives = 34/66 (51%)
 Frame = +3

Query: 303 IYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LF 482
           ++   ++  TG H IH++ G   L+   +R +   F++ +    +    Y H VD++ ++
Sbjct: 363 VFFGIYYCMTGVHAIHILAGIGVLVWLLVRAVRQDFNRQYFGPVDYVGLYWHLVDLIWIY 422

Query: 483 LYISIY 500
           L+  +Y
Sbjct: 423 LFPLLY 428


>UniRef50_A3K371 Cluster: Cytochrome o ubiquinol oxidase subunit
           III; n=1; Sagittula stellata E-37|Rep: Cytochrome o
           ubiquinol oxidase subunit III - Sagittula stellata E-37
          Length = 211

 Score = 37.1 bits (82), Expect = 0.25
 Identities = 22/98 (22%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
 Frame = +3

Query: 216 LFLTILLGFYFTILQAYEYIEASFTIADRI---YGSTFFIATGFHGIHVIIGTLFLLICY 386
           L  ++  G  F  L+  ++I+A+   A  +   Y S ++   G HG+HV +G+L +L+  
Sbjct: 108 LLASLAFGLCFLGLEVRDFIDAAEKGAVPMRSGYLSAYWALVGLHGLHVTVGSLMILVVC 167

Query: 387 IRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFLYISIY 500
           ++     F+ +          Y HF+D++ + ++  ++
Sbjct: 168 VQIAIFGFADDVKTRVLRLGLYWHFLDIIWIGIFSVVF 205


>UniRef50_Q4RB68 Cluster: Chromosome undetermined SCAF22168, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF22168,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 103

 Score = 36.7 bits (81), Expect = 0.33
 Identities = 21/82 (25%), Positives = 34/82 (41%)
 Frame = +2

Query: 269 IYRSFFYNC**NLWIHFFHSNRISWNSCNNWNFISINLLYSTXXXXXXXXXXXXXXXXXX 448
           I RS  +NC  +LW+     + +      +W ++  +L  S+                  
Sbjct: 3   ILRSSIHNCRRSLWLDLLCRHWLPRTPRYHWLYLPSHLPTSSNPIPLYIRTSLRLRSSSL 62

Query: 449 XXTFCRCSMIISLHFYLLMRKL 514
             T CRC + I LH  LLMR++
Sbjct: 63  ILTLCRCRLTIPLHLNLLMRRI 84


>UniRef50_Q01RA0 Cluster: Cytochrome c oxidase, subunit III; n=1;
           Solibacter usitatus Ellin6076|Rep: Cytochrome c oxidase,
           subunit III - Solibacter usitatus (strain Ellin6076)
          Length = 205

 Score = 36.7 bits (81), Expect = 0.33
 Identities = 31/129 (24%), Positives = 52/129 (40%)
 Frame = +3

Query: 114 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFTI 293
           +P L  I L  S V    A  +  +N+ +     L L + L   F +L+A E+   +FT 
Sbjct: 67  LPSLALIPLFASCVGSYLASEAAKKNSRAGMLLGLGLNLGLATVFLVLRALEWSRLNFTW 126

Query: 294 ADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV 473
           A   +GS F+     H   +I   L   +      + H+      G    +   +F+  +
Sbjct: 127 ASDAHGSIFWTILFLHSYDIIADVLMTAVLLTIVASGHYGPRQRIGVHVDSILWYFLVGI 186

Query: 474 *LFLYISIY 500
            + LY  IY
Sbjct: 187 WIPLYAVIY 195


>UniRef50_A1ULE6 Cluster: Cytochrome c oxidase, subunit III
           precursor; n=6; Mycobacterium|Rep: Cytochrome c oxidase,
           subunit III precursor - Mycobacterium sp. (strain KMS)
          Length = 193

 Score = 36.7 bits (81), Expect = 0.33
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
 Frame = +3

Query: 114 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIE---AS 284
           I L +T++L+ S + V  A  ++     +  ++ +   I LG  F  L+  EY+    A 
Sbjct: 59  IGLADTLVLLTSSLCVVVALGAVRAGAGALARRAVIAAIGLGVVFVGLKVSEYLSLGAAG 118

Query: 285 FTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFV 464
                  +   +FI TG H  HV IG   L +   +      +       E  A + H V
Sbjct: 119 HGPGANDFYLYYFILTGLHLFHVAIGLTVLAVVADQVRRPPLTPGRTALVEGGACFWHLV 178

Query: 465 DVV*LFLYISIY 500
           D++ + L+  +Y
Sbjct: 179 DLLWIVLFALLY 190


>UniRef50_A4YQP7 Cluster: Cytochrome o ubiquinol oxidase, subunit
           III; n=3; Bradyrhizobium|Rep: Cytochrome o ubiquinol
           oxidase, subunit III - Bradyrhizobium sp. (strain
           ORS278)
          Length = 213

 Score = 35.9 bits (79), Expect = 0.58
 Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
 Frame = +3

Query: 123 LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEA---SFTI 293
           + T +L+ S  T   A  +   +N    +  + +T LLG  F +L+  E+ +        
Sbjct: 79  IETALLLLSSFTCGMASIAADRHNALWFQVAMAVTGLLGAAFLLLEVREFADLVGRGDGP 138

Query: 294 ADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV 473
           +   + S FF   G HG+HV  G L+LL    + +   F  +        A + H +D++
Sbjct: 139 SRSAFLSAFFTLVGCHGLHVAAGILWLLTMMAQVVAKGFRADIERRILCFALFWHALDII 198

Query: 474 *LFLYISIY 500
            + ++  +Y
Sbjct: 199 WVAVFSVVY 207


>UniRef50_A0YDD4 Cluster: Cytochrome c oxidase subunit III; n=1;
           marine gamma proteobacterium HTCC2143|Rep: Cytochrome c
           oxidase subunit III - marine gamma proteobacterium
           HTCC2143
          Length = 221

 Score = 35.5 bits (78), Expect = 0.76
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
 Frame = +3

Query: 96  PF-NPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFT---ILQA 263
           PF NP Q+  +NT IL+ + V +  A  S   N        + L  L    F    IL  
Sbjct: 70  PFTNPQQL-WVNTGILLAASVAIQFASSSAKNNRLLAANIAIALCGLFTLAFIGAQILVW 128

Query: 264 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLI 380
              I+  + +A     S F++ T  HG+H ++G +F+L+
Sbjct: 129 QHLIDLGYFVASNPANSYFYLFTAIHGLH-LVGGIFVLL 166


>UniRef50_Q6G520 Cluster: Cytochrome o ubiquinol oxidase subunit
           III; n=3; Bartonella|Rep: Cytochrome o ubiquinol oxidase
           subunit III - Bartonella henselae (Rochalimaea henselae)
          Length = 221

 Score = 35.1 bits (77), Expect = 1.0
 Identities = 15/65 (23%), Positives = 33/65 (50%)
 Frame = +3

Query: 306 YGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LFL 485
           Y S FF   G HG+HV  G L++++ +    +    +++       + + H +D+V + +
Sbjct: 152 YWSAFFALVGTHGLHVSAGLLWMIVMFFHIHHCGLDQDNKTRLACLSIFWHLLDIVWVGV 211

Query: 486 YISIY 500
           +  +Y
Sbjct: 212 FTMVY 216


>UniRef50_Q2K1Y9 Cluster: Putative cytochrome c oxidase subunit III
           protein; n=1; Rhizobium etli CFN 42|Rep: Putative
           cytochrome c oxidase subunit III protein - Rhizobium
           etli (strain CFN 42 / ATCC 51251)
          Length = 200

 Score = 35.1 bits (77), Expect = 1.0
 Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
 Frame = +3

Query: 186 ENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGT 365
           + +  + +  L +  LLG    I +A+E+        D  YGS  +   G H  H+I   
Sbjct: 90  QRDLRKVRVGLIVMTLLGASPLIPRAFEFRALHIGWDDDAYGSIIWTMLGLHATHIITDL 149

Query: 366 LFLLICYIRHLNNHFSKNHHFG-FEAAA*Y*HFVDVV*LFLYISIY 500
           +  ++      + H      +G  E  A Y +FV +  L LY  IY
Sbjct: 150 IDTIVLACLMFSKHGDNARRYGDVEDNALYWNFVVLAWLPLYGCIY 195


>UniRef50_Q1IQ26 Cluster: Heme/copper-type cytochrome/quinol oxidase
           subunit 3-like; n=1; Acidobacteria bacterium
           Ellin345|Rep: Heme/copper-type cytochrome/quinol oxidase
           subunit 3-like - Acidobacteria bacterium (strain
           Ellin345)
          Length = 254

 Score = 35.1 bits (77), Expect = 1.0
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +3

Query: 303 IYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LF 482
           I  S FFI TG H  H++ G   L    +        +N+    +A + + HF+ V+ ++
Sbjct: 185 ISSSFFFILTGAHAAHLLAGITALTYAGVVSFVRRAPENYRLIIDATSIFWHFMGVLWVY 244

Query: 483 LYISIY 500
           L+  +Y
Sbjct: 245 LFALMY 250


>UniRef50_A6FB27 Cluster: Cytochrome c oxidase subunit III; n=1;
           Moritella sp. PE36|Rep: Cytochrome c oxidase subunit III
           - Moritella sp. PE36
          Length = 233

 Score = 35.1 bits (77), Expect = 1.0
 Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
 Frame = +3

Query: 96  PFNPFQIPL---LNTIILIRSGVTVT*AHHSL-IENNFSQTKQ--RLFLTILLGFYFTI- 254
           P+ PF  P    +N+  L+ + + +  A  S  I    + T+    L LT L    F I 
Sbjct: 75  PWLPFSNPTTLWVNSAFLLLASIAIRFAATSKPINERVAHTRMVLALCLTGLFSCLFLIG 134

Query: 255 -LQAYEYIEAS-FTIADRIYGSTFFIATGFHGIHVIIGTLFLL---ICYIRHLNN-HFSK 416
            L  ++ + AS F +      S F++ TG HG+H+  G + L+   + ++RH ++   + 
Sbjct: 135 QLLVWQQLTASGFAVNGNPANSYFYLFTGIHGLHLAGGFIALIRVVVIFVRHADSERLTA 194

Query: 417 NHHFGFEAAA*Y*HFVDVV*LFLY 488
           N H        Y H++ +V + L+
Sbjct: 195 NLHL----CVWYWHYLFIVWMLLF 214


>UniRef50_Q0F918 Cluster: Fatty acid desaturase family protein; n=1;
           alpha proteobacterium HTCC2255|Rep: Fatty acid
           desaturase family protein - alpha proteobacterium
           HTCC2255
          Length = 313

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
 Frame = +3

Query: 117 PLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEYIEASFTIA 296
           PL+ TI  I+S + +    +  +   +      L + +L  +YF  +Q +EY  A+++  
Sbjct: 142 PLIGTITFIQSDLNLIFQGNKQVFYGWLHFIPALMIVLLWLYYFGTVQVWEYAIAAYSAL 201

Query: 297 DRIYGSTFFIATGFHGIHVIIGTLFLLIC-----YIRHLNNHFSKNHH 425
             +   TF      H  H I     +++C      I  LNN+F   HH
Sbjct: 202 SILKIRTFI----EHRAHSITNARSVIVCDRGLLSILFLNNNFHAVHH 245


>UniRef50_Q8I5M6 Cluster: Putative uncharacterized protein; n=4;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 2134

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = -3

Query: 516  INFLINK*KCKEIIILHLQNVNIKLQLQIQSDDF*KSDYLNVEYSKLI 373
            INF  N  K KE I++++ N  +   +   SDD+    Y NV++S+ +
Sbjct: 1220 INFKSNDNKKKENIMMNISNDYMSPNINQDSDDYENDSYFNVDFSEYV 1267


>UniRef50_A4A0M6 Cluster: Cytochrome oxidase subunit III; n=1;
           Blastopirellula marina DSM 3645|Rep: Cytochrome oxidase
           subunit III - Blastopirellula marina DSM 3645
          Length = 302

 Score = 33.1 bits (72), Expect = 4.1
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = +3

Query: 303 IYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV*LF 482
           I+   +++ TG H IH+I G   +     R     FS  +    +    Y H VD++ ++
Sbjct: 234 IFFGIYYMMTGIHAIHIIGGMGAIGWLIYRANKGEFSSEYFGPVDYVGLYWHLVDLIWIY 293

Query: 483 LYISIY 500
           L+  +Y
Sbjct: 294 LFPLLY 299


>UniRef50_Q62KR1 Cluster: Copper ABC transporter, permease protein
           NosY, putative; n=21; Betaproteobacteria|Rep: Copper ABC
           transporter, permease protein NosY, putative -
           Burkholderia mallei (Pseudomonas mallei)
          Length = 278

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +3

Query: 261 AYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYI 389
           A   + A+FT+A   +G+    A GFHGI  +I +L  L  Y+
Sbjct: 32  AISIVFAAFTLAISYFGAAAQGAVGFHGIEPLIASLVSLAIYL 74


>UniRef50_A5NRY7 Cluster: Cytochrome c oxidase, subunit III; n=3;
           Alphaproteobacteria|Rep: Cytochrome c oxidase, subunit
           III - Methylobacterium sp. 4-46
          Length = 225

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
 Frame = +3

Query: 126 NTIILIRSGVTVT*AHHSL-IENNFSQTKQR-LFLTILLGFYFTILQAYEY---IEAS-- 284
           NT IL+ S +T+  A  +   E +  +     L +T  LG  F  ++  EY   IE S  
Sbjct: 81  NTAILLTSSLTMAVASQAAKAEEDLRRLVVACLAVTAALGLAFVAVKGVEYREDIEKSLV 140

Query: 285 ----FTIAD---RIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAA 443
               F +A    +I+ + +++ TG H +H+ +G   +    +               E  
Sbjct: 141 PGPHFPLAAAPAQIFFALYWLMTGVHALHLSVGIALVGRLALLGWRGRLELRGSPEVEVT 200

Query: 444 A*Y*HFVDVV*LFLYISIY 500
           A Y H VDVV + LY   Y
Sbjct: 201 ALYWHLVDVVWIVLYPVFY 219


>UniRef50_UPI0000E87ABA Cluster: apolipoprotein N-acyltransferase;
           n=1; Methylophilales bacterium HTCC2181|Rep:
           apolipoprotein N-acyltransferase - Methylophilales
           bacterium HTCC2181
          Length = 381

 Score = 32.3 bits (70), Expect = 7.1
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +3

Query: 309 GSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHF 410
           GSTF+I  G + I ++ G L L+IC+++  N+ F
Sbjct: 349 GSTFYIRYGNYPIVILCG-LLLIICFVKRKNSRF 381


>UniRef50_Q7US88 Cluster: Probable cytochrome c oxidase, subunit
           III; n=1; Pirellula sp.|Rep: Probable cytochrome c
           oxidase, subunit III - Rhodopirellula baltica
          Length = 202

 Score = 32.3 bits (70), Expect = 7.1
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 339 HGIHVIIGTLFLLICYIRHLNNHFSKNHHFGFEAAA*Y*HFVDVV 473
           H +HV  G + L I  +R +   +    H+  + AA Y HF+D+V
Sbjct: 138 HALHVAGGVIALGIVSVRSMLGKYDHERHWPVDFAAQYWHFLDLV 182


>UniRef50_Q96179 Cluster: Cytochrome c oxidase subunit 3; n=1;
           Pallasea baikali|Rep: Cytochrome c oxidase subunit 3 -
           Pallasea baikali
          Length = 101

 Score = 32.3 bits (70), Expect = 7.1
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +3

Query: 18  YF*AFFHRRLSPNIEIGRI*PPSRI 92
           +F AFFH  L+PN+E+G + PP+ I
Sbjct: 77  FFWAFFHSSLNPNMELGDMWPPTCI 101


>UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1;
           Saccharomyces cerevisiae|Rep: Cytochrome b mRNA maturase
           bI3 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 517

 Score = 32.3 bits (70), Expect = 7.1
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +2

Query: 146 IWGNSNMSSSLIDRK*LLTNKTKIIFNYFIRILFYYFTSI*IYRSFFYN 292
           +WG  NM         ++ NK+ + +N FI ++ YY   + IY +  +N
Sbjct: 165 LWGGFNMEDPYYSN--MMLNKSVLCWNIFIWMMNYYIIQLIIYNNMIWN 211


>UniRef50_UPI00006CD9F4 Cluster: Cytochrome b5-like Heme/Steroid
           binding domain containing protein; n=1; Tetrahymena
           thermophila SB210|Rep: Cytochrome b5-like Heme/Steroid
           binding domain containing protein - Tetrahymena
           thermophila SB210
          Length = 833

 Score = 31.9 bits (69), Expect = 9.4
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 345 IHVIIGTLFLLICYIRHLNNHFSK 416
           +H I+GTLFL I  ++HL+ +F K
Sbjct: 239 LHFILGTLFLAIVIVQHLSGYFLK 262


>UniRef50_A6LJ46 Cluster: Putative uncharacterized protein; n=1;
           Thermosipho melanesiensis BI429|Rep: Putative
           uncharacterized protein - Thermosipho melanesiensis
           BI429
          Length = 342

 Score = 31.9 bits (69), Expect = 9.4
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
 Frame = +3

Query: 210 QRLFLTILLGFYF--TI-LQAYEYIEASFTIADRIYGSTF-FIATGFHGIHVIIGTLFLL 377
           ++LFL IL+ FYF  T+    Y +I    +I+D ++ S F F+  G+  I + +  L L 
Sbjct: 66  KKLFLNILIPFYFMSTVGYFVYYFINRFVSISDSVFSSIFDFLFFGYSPIDMPVNVLPLW 125

Query: 378 ICYI 389
             Y+
Sbjct: 126 YLYM 129


>UniRef50_A6LAR8 Cluster: Putative precorrin-2
           C20-methyltransferase; n=1; Parabacteroides distasonis
           ATCC 8503|Rep: Putative precorrin-2
           C20-methyltransferase - Parabacteroides distasonis
           (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 234

 Score = 31.9 bits (69), Expect = 9.4
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 237 GFYFTILQAYEYIEASFTIADRIYGSTFFIATG-FHGIHVI 356
           GFY +I   Y+  E +    DRI G   FIA G   GIH++
Sbjct: 105 GFYSSIQYVYDKFEETGIPVDRIAGIPAFIAAGALAGIHIV 145


>UniRef50_A4G459 Cluster: Cytochrome oxidase subunit III OXIDASE
           POLYPEPTIDE I (CYTOCHROME BB3 SUBUNIT 1) OXIDOREDUCTASE
           PROTEIN; n=2; Burkholderiales|Rep: Cytochrome oxidase
           subunit III OXIDASE POLYPEPTIDE I (CYTOCHROME BB3
           SUBUNIT 1) OXIDOREDUCTASE PROTEIN - Herminiimonas
           arsenicoxydans
          Length = 216

 Score = 31.9 bits (69), Expect = 9.4
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
 Frame = +3

Query: 105 PFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFTILQAYEY---I 275
           P+Q+  L+T++LI   V +  A  S    ++ + +  L +  +    F   Q + +   +
Sbjct: 66  PWQL-WLSTLLLISGSVALQLASQSARGADWRRARTLLLVGGIAALAFMCAQLWAWQALL 124

Query: 276 EASFTIADRIYGSTFFIATGFHGIHVIIGTL 368
            A    A    GS F++ T  HG+HV  G L
Sbjct: 125 TAQVRPAGNPAGSFFYLLTAMHGLHVAGGLL 155


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,661,728
Number of Sequences: 1657284
Number of extensions: 7522557
Number of successful extensions: 18404
Number of sequences better than 10.0: 206
Number of HSP's better than 10.0 without gapping: 17848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18312
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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