Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt2e22
(429 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 30 0.18
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 29 0.40
SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase Pmp1|... 28 0.71
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 28 0.71
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 27 1.6
SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces p... 26 2.2
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 26 2.9
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 25 3.8
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 25 5.0
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 25 6.6
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 25 6.6
SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|... 24 8.7
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 29.9 bits (64), Expect = 0.18
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 331 NFXRYSLLPTASTRERGRLEVRSALGRVHVICTVVDRFV 215
NF ++P STR+R + +R G +H+IC D +
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVI 794
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 28.7 bits (61), Expect = 0.40
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +2
Query: 158 DNRPYIXNPPKD-YNPNG-NGYEPIDNGAYYVDPPQG---RPYFKPTPFPG 295
+++ Y P +D YN N N Y PI N Y+++ G PYF PG
Sbjct: 107 NSQGYRRKPKRDDYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157
>SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase
Pmp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 278
Score = 27.9 bits (59), Expect = 0.71
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 116 VVENADSGNGYEPIDNRPYIXNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPT 283
++EN + + + P + PK PN N +P NG + PP Y KPT
Sbjct: 23 MLENEEEASHSQLFTPCPVPPSFPKASKPNSN--QPYPNGPVCIYPPNIYLYAKPT 76
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.9 bits (59), Expect = 0.71
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 144 ATNLLTTARTSXILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSL 293
A+ L +++ T+ + P +T ET ++ S+ T T+ + TSS P+SL
Sbjct: 234 ASTLESSSLTNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.6 bits (56), Expect = 1.6
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 217 RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 324
R + ++C R P RP + PW + + K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315
>SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 473
Score = 26.2 bits (55), Expect = 2.2
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = +2
Query: 110 VKVVENADSGNGYEPIDNRPYIXNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTP 286
V+++++ S + + + +P N + N N +P D PP +PTP
Sbjct: 126 VRIIDHRQSPSADQTVQPQPGSTNQQQQNNTNPINNQPEDTKPNTNSPPVYHTVLRPTP 184
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 25.8 bits (54), Expect = 2.9
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +3
Query: 132 TQETATNLLTTARTSXILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLS 290
T ET T + T + + TT+ + T + T T P + T+ LP++
Sbjct: 103 TVETTTTPMVETTTITPMVETTTITPMVEAMITLMEETMTTPMEETTTILPMA 155
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 25.4 bits (53), Expect = 3.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 84 WLWPTLKTQLR*WKTLTQETATN 152
W WPT + LR +T ET T+
Sbjct: 375 WFWPTFASFLRESDVVTTETGTS 397
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 25.0 bits (52), Expect = 5.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 188 KDYNPNGNGYEPIDNGAYYVDPPQGRP 268
K Y +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 24.6 bits (51), Expect = 6.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 155 IDNRPYIXNPPKDYNPNGNGYEPIDNGAY 241
+++ PY+ N D+N NGN P+ +Y
Sbjct: 370 VNSMPYLSNG--DHNNNGNTSSPVSRFSY 396
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 24.6 bits (51), Expect = 6.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 68 FVLALLAMANAQDPVKVVENADSGNGYEP 154
F+ +L++A + P V + D+G GY P
Sbjct: 223 FLFPILSLAFDKGPAAVPVDQDAGMGYRP 251
>SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 521
Score = 24.2 bits (50), Expect = 8.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 426 FFKHYNMFIYLFR*HKFIXNFEIYC*YIISL 334
FF YN FI+ F+ FI ++ Y+I +
Sbjct: 470 FFNGYNAFIHGFKYRSFITSYIGIAAYVIMI 500
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,578,390
Number of Sequences: 5004
Number of extensions: 31151
Number of successful extensions: 99
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 154448264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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